data_2QL7 # _model_server_result.job_id qkkjFQMii1GcMnQrPkUQFQ _model_server_result.datetime_utc '2025-07-06 14:28:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ql7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":850}' # _entry.id 2QL7 # _exptl.entry_id 2QL7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QL7 _cell.length_a 87.942 _cell.length_b 87.942 _cell.length_c 187.551 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QL7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 163 A CYS 186 1_555 E C ASJ 5 E ASJ 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? covale ? covale2 C SG CYS 163 C CYS 486 1_555 F C ASJ 5 F ASJ 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? covale ? covale3 E C ACE 1 E ACE 701 1_555 E N ILE 2 E ILE 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale4 E C PRO 4 E PRO 704 1_555 E N ASJ 5 E ASJ 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 F C ACE 1 F ACE 801 1_555 F N ILE 2 F ILE 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale6 F C PRO 4 F PRO 804 1_555 F N ASJ 5 F ASJ 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 92 n n C1 O2 CIT sing 93 n n C1 C2 CIT sing 94 n n O2 HO2 CIT sing 95 n n C2 C3 CIT sing 96 n n C2 H21 CIT sing 97 n n C2 H22 CIT sing 98 n n C3 O7 CIT sing 99 n n C3 C4 CIT sing 100 n n C3 C6 CIT sing 101 n n O7 HO7 CIT sing 102 n n C4 C5 CIT sing 103 n n C4 H41 CIT sing 104 n n C4 H42 CIT sing 105 n n C5 O3 CIT doub 106 n n C5 O4 CIT sing 107 n n O4 HO4 CIT sing 108 n n C6 O5 CIT doub 109 n n C6 O6 CIT sing 110 n n O6 HO6 CIT sing 111 n n # _atom_sites.entry_id 2QL7 _atom_sites.fract_transf_matrix[1][1] 0.011371 _atom_sites.fract_transf_matrix[1][2] 0.006565 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01313 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005332 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 5 CIT D 1 850 850 CIT CIT . I 6 HOH A 1 197 197 HOH HOH . I 6 HOH A 2 198 198 HOH HOH . I 6 HOH A 3 199 199 HOH HOH . I 6 HOH A 4 200 200 HOH HOH . I 6 HOH A 5 201 201 HOH HOH . I 6 HOH A 6 202 202 HOH HOH . I 6 HOH A 7 203 203 HOH HOH . I 6 HOH A 8 204 204 HOH HOH . I 6 HOH A 9 205 205 HOH HOH . I 6 HOH A 10 206 206 HOH HOH . I 6 HOH A 11 207 207 HOH HOH . I 6 HOH A 12 208 208 HOH HOH . I 6 HOH A 13 209 209 HOH HOH . I 6 HOH A 14 210 210 HOH HOH . I 6 HOH A 15 211 211 HOH HOH . I 6 HOH A 16 212 212 HOH HOH . I 6 HOH A 17 213 213 HOH HOH . I 6 HOH A 18 214 214 HOH HOH . I 6 HOH A 19 215 215 HOH HOH . I 6 HOH A 20 216 216 HOH HOH . I 6 HOH A 21 217 217 HOH HOH . I 6 HOH A 22 218 218 HOH HOH . I 6 HOH A 23 219 219 HOH HOH . I 6 HOH A 24 220 220 HOH HOH . I 6 HOH A 25 221 221 HOH HOH . I 6 HOH A 26 222 222 HOH HOH . I 6 HOH A 27 223 223 HOH HOH . I 6 HOH A 28 224 224 HOH HOH . I 6 HOH A 29 225 225 HOH HOH . I 6 HOH A 30 226 226 HOH HOH . I 6 HOH A 31 227 227 HOH HOH . I 6 HOH A 32 228 228 HOH HOH . I 6 HOH A 33 229 229 HOH HOH . I 6 HOH A 34 230 230 HOH HOH . I 6 HOH A 35 231 231 HOH HOH . I 6 HOH A 36 232 232 HOH HOH . I 6 HOH A 37 233 233 HOH HOH . I 6 HOH A 38 234 234 HOH HOH . I 6 HOH A 39 235 235 HOH HOH . I 6 HOH A 40 236 236 HOH HOH . I 6 HOH A 41 237 237 HOH HOH . I 6 HOH A 42 238 238 HOH HOH . I 6 HOH A 43 239 239 HOH HOH . I 6 HOH A 44 240 240 HOH HOH . I 6 HOH A 45 241 241 HOH HOH . I 6 HOH A 46 242 242 HOH HOH . I 6 HOH A 47 243 243 HOH HOH . I 6 HOH A 48 244 244 HOH HOH . I 6 HOH A 49 245 245 HOH HOH . I 6 HOH A 50 246 246 HOH HOH . I 6 HOH A 51 247 247 HOH HOH . I 6 HOH A 52 248 248 HOH HOH . I 6 HOH A 53 249 249 HOH HOH . I 6 HOH A 54 250 250 HOH HOH . I 6 HOH A 55 251 251 HOH HOH . I 6 HOH A 56 252 252 HOH HOH . I 6 HOH A 57 253 253 HOH HOH . I 6 HOH A 58 254 254 HOH HOH . I 6 HOH A 59 255 255 HOH HOH . I 6 HOH A 60 256 256 HOH HOH . I 6 HOH A 61 257 257 HOH HOH . J 6 HOH B 1 304 304 HOH HOH . J 6 HOH B 2 305 305 HOH HOH . J 6 HOH B 3 306 306 HOH HOH . J 6 HOH B 4 307 307 HOH HOH . J 6 HOH B 5 308 308 HOH HOH . J 6 HOH B 6 309 309 HOH HOH . J 6 HOH B 7 310 310 HOH HOH . J 6 HOH B 8 311 311 HOH HOH . J 6 HOH B 9 312 312 HOH HOH . J 6 HOH B 10 313 313 HOH HOH . J 6 HOH B 11 314 314 HOH HOH . J 6 HOH B 12 315 315 HOH HOH . J 6 HOH B 13 316 316 HOH HOH . J 6 HOH B 14 317 317 HOH HOH . J 6 HOH B 15 318 318 HOH HOH . J 6 HOH B 16 319 319 HOH HOH . J 6 HOH B 17 320 320 HOH HOH . J 6 HOH B 18 321 321 HOH HOH . J 6 HOH B 19 322 322 HOH HOH . J 6 HOH B 20 323 323 HOH HOH . J 6 HOH B 21 324 324 HOH HOH . J 6 HOH B 22 325 325 HOH HOH . J 6 HOH B 23 326 326 HOH HOH . J 6 HOH B 24 327 327 HOH HOH . J 6 HOH B 25 328 328 HOH HOH . J 6 HOH B 26 329 329 HOH HOH . J 6 HOH B 27 330 330 HOH HOH . J 6 HOH B 28 331 331 HOH HOH . J 6 HOH B 29 332 332 HOH HOH . J 6 HOH B 30 333 333 HOH HOH . J 6 HOH B 31 334 334 HOH HOH . J 6 HOH B 32 335 335 HOH HOH . J 6 HOH B 33 336 336 HOH HOH . J 6 HOH B 34 337 337 HOH HOH . K 6 HOH C 1 1 1 HOH HOH . K 6 HOH C 2 3 3 HOH HOH . K 6 HOH C 3 4 4 HOH HOH . K 6 HOH C 4 5 5 HOH HOH . K 6 HOH C 5 7 7 HOH HOH . K 6 HOH C 6 10 10 HOH HOH . K 6 HOH C 7 12 12 HOH HOH . K 6 HOH C 8 21 21 HOH HOH . K 6 HOH C 9 22 22 HOH HOH . K 6 HOH C 10 25 25 HOH HOH . K 6 HOH C 11 26 26 HOH HOH . K 6 HOH C 12 37 37 HOH HOH . K 6 HOH C 13 39 39 HOH HOH . K 6 HOH C 14 41 41 HOH HOH . K 6 HOH C 15 43 43 HOH HOH . K 6 HOH C 16 45 45 HOH HOH . K 6 HOH C 17 49 49 HOH HOH . K 6 HOH C 18 50 50 HOH HOH . K 6 HOH C 19 51 51 HOH HOH . K 6 HOH C 20 53 53 HOH HOH . K 6 HOH C 21 56 56 HOH HOH . K 6 HOH C 22 57 57 HOH HOH . K 6 HOH C 23 60 60 HOH HOH . K 6 HOH C 24 62 62 HOH HOH . K 6 HOH C 25 64 64 HOH HOH . K 6 HOH C 26 66 66 HOH HOH . K 6 HOH C 27 67 67 HOH HOH . K 6 HOH C 28 68 68 HOH HOH . K 6 HOH C 29 71 71 HOH HOH . K 6 HOH C 30 72 72 HOH HOH . K 6 HOH C 31 73 73 HOH HOH . K 6 HOH C 32 74 74 HOH HOH . K 6 HOH C 33 75 75 HOH HOH . K 6 HOH C 34 76 76 HOH HOH . K 6 HOH C 35 77 77 HOH HOH . K 6 HOH C 36 78 78 HOH HOH . K 6 HOH C 37 80 80 HOH HOH . K 6 HOH C 38 85 85 HOH HOH . K 6 HOH C 39 98 98 HOH HOH . K 6 HOH C 40 101 101 HOH HOH . K 6 HOH C 41 102 102 HOH HOH . K 6 HOH C 42 115 115 HOH HOH . K 6 HOH C 43 117 117 HOH HOH . K 6 HOH C 44 118 118 HOH HOH . K 6 HOH C 45 119 119 HOH HOH . K 6 HOH C 46 122 122 HOH HOH . K 6 HOH C 47 130 130 HOH HOH . K 6 HOH C 48 131 131 HOH HOH . K 6 HOH C 49 133 133 HOH HOH . K 6 HOH C 50 137 137 HOH HOH . K 6 HOH C 51 140 140 HOH HOH . K 6 HOH C 52 141 141 HOH HOH . K 6 HOH C 53 142 142 HOH HOH . K 6 HOH C 54 145 145 HOH HOH . K 6 HOH C 55 146 146 HOH HOH . K 6 HOH C 56 147 147 HOH HOH . K 6 HOH C 57 148 148 HOH HOH . K 6 HOH C 58 149 149 HOH HOH . K 6 HOH C 59 151 151 HOH HOH . K 6 HOH C 60 152 152 HOH HOH . K 6 HOH C 61 155 155 HOH HOH . K 6 HOH C 62 156 156 HOH HOH . K 6 HOH C 63 157 157 HOH HOH . K 6 HOH C 64 158 158 HOH HOH . K 6 HOH C 65 159 159 HOH HOH . K 6 HOH C 66 161 161 HOH HOH . K 6 HOH C 67 162 162 HOH HOH . K 6 HOH C 68 165 165 HOH HOH . K 6 HOH C 69 166 166 HOH HOH . K 6 HOH C 70 170 170 HOH HOH . K 6 HOH C 71 171 171 HOH HOH . K 6 HOH C 72 172 172 HOH HOH . K 6 HOH C 73 173 173 HOH HOH . K 6 HOH C 74 176 176 HOH HOH . K 6 HOH C 75 184 184 HOH HOH . K 6 HOH C 76 193 193 HOH HOH . K 6 HOH C 77 200 200 HOH HOH . K 6 HOH C 78 202 202 HOH HOH . K 6 HOH C 79 203 203 HOH HOH . K 6 HOH C 80 209 209 HOH HOH . K 6 HOH C 81 210 210 HOH HOH . K 6 HOH C 82 214 214 HOH HOH . K 6 HOH C 83 216 216 HOH HOH . K 6 HOH C 84 218 218 HOH HOH . L 6 HOH D 1 8 8 HOH HOH . L 6 HOH D 2 14 14 HOH HOH . L 6 HOH D 3 15 15 HOH HOH . L 6 HOH D 4 18 18 HOH HOH . L 6 HOH D 5 19 19 HOH HOH . L 6 HOH D 6 23 23 HOH HOH . L 6 HOH D 7 35 35 HOH HOH . L 6 HOH D 8 36 36 HOH HOH . L 6 HOH D 9 40 40 HOH HOH . L 6 HOH D 10 42 42 HOH HOH . L 6 HOH D 11 46 46 HOH HOH . L 6 HOH D 12 52 52 HOH HOH . L 6 HOH D 13 59 59 HOH HOH . L 6 HOH D 14 61 61 HOH HOH . L 6 HOH D 15 79 79 HOH HOH . L 6 HOH D 16 82 82 HOH HOH . L 6 HOH D 17 83 83 HOH HOH . L 6 HOH D 18 88 88 HOH HOH . L 6 HOH D 19 93 93 HOH HOH . L 6 HOH D 20 96 96 HOH HOH . L 6 HOH D 21 105 105 HOH HOH . L 6 HOH D 22 112 112 HOH HOH . L 6 HOH D 23 114 114 HOH HOH . L 6 HOH D 24 126 126 HOH HOH . L 6 HOH D 25 127 127 HOH HOH . L 6 HOH D 26 129 129 HOH HOH . L 6 HOH D 27 134 134 HOH HOH . L 6 HOH D 28 135 135 HOH HOH . L 6 HOH D 29 138 138 HOH HOH . L 6 HOH D 30 167 167 HOH HOH . L 6 HOH D 31 181 181 HOH HOH . L 6 HOH D 32 182 182 HOH HOH . L 6 HOH D 33 183 183 HOH HOH . L 6 HOH D 34 186 186 HOH HOH . L 6 HOH D 35 189 189 HOH HOH . L 6 HOH D 36 191 191 HOH HOH . L 6 HOH D 37 192 192 HOH HOH . L 6 HOH D 38 194 194 HOH HOH . L 6 HOH D 39 198 198 HOH HOH . L 6 HOH D 40 208 208 HOH HOH . M 6 HOH G 1 217 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . H 5 -37.51 12.64 8.844 1 99.66 ? C1 CIT 850 D 1 HETATM 2 O O1 CIT . . . H 5 -36.715 11.727 8.864 1 99.93 ? O1 CIT 850 D 1 HETATM 3 O O2 CIT . . . H 5 -38.687 12.482 9.476 1 99.11 ? O2 CIT 850 D 1 HETATM 4 C C2 CIT . . . H 5 -37.298 13.893 7.963 1 99.17 ? C2 CIT 850 D 1 HETATM 5 C C3 CIT . . . H 5 -36.644 13.717 6.526 1 98.52 ? C3 CIT 850 D 1 HETATM 6 O O7 CIT . . . H 5 -36.929 12.453 5.84 1 98.86 ? O7 CIT 850 D 1 HETATM 7 C C4 CIT . . . H 5 -35.172 13.931 6.811 1 98.22 ? C4 CIT 850 D 1 HETATM 8 C C5 CIT . . . H 5 -34.268 12.782 6.658 1 97 ? C5 CIT 850 D 1 HETATM 9 O O3 CIT . . . H 5 -33.392 12.974 5.916 1 96.48 ? O3 CIT 850 D 1 HETATM 10 O O4 CIT . . . H 5 -33.936 12.127 7.747 1 96.63 ? O4 CIT 850 D 1 HETATM 11 C C6 CIT . . . H 5 -37.087 14.87 5.576 1 98.36 ? C6 CIT 850 D 1 HETATM 12 O O5 CIT . . . H 5 -37.026 14.717 4.371 1 99.44 ? O5 CIT 850 D 1 HETATM 13 O O6 CIT . . . H 5 -37.144 16.146 6.023 1 96.61 ? O6 CIT 850 D 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #