data_2QLA
#
_model_server_result.job_id            R2PlIlyH-E7P2imVYS919w 
_model_server_result.datetime_utc      '2024-11-23 15:19:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qla 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":153}' 
#
_entry.id    2QLA 
#
_exptl.entry_id    2QLA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2QLA 
_cell.length_a            88.984 
_cell.length_b            66.659 
_cell.length_c            68.901 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QLA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SD MET 7 A MET 7 1_555 E FE HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc2 A NE2 HIS 63 A HIS 63 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc3 A NE2 HIS 73 A HIS 73 1_555 F ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
metalc ? metalc4 A OD2 ASP 74 A ASP 74 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc5 A NE2 HIS 77 A HIS 77 1_555 F ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc6 A NE2 HIS 102 A HIS 102 1_555 E FE HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc7 F ZN ZN . A ZN 500 1_555 C OD2 ASP 74 C ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc8 F ZN ZN . A ZN 500 1_555 D NE2 HIS 63 D HIS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc9 B SD MET 7 B MET 7 1_555 G FE HEM . B HEM 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc10 B NE2 HIS 63 B HIS 63 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc11 B NE2 HIS 73 B HIS 73 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc12 B OD2 ASP 74 B ASP 74 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc13 B NE2 HIS 77 B HIS 77 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc14 B NE2 HIS 102 B HIS 102 1_555 G FE HEM . B HEM 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc15 H ZN ZN . B ZN 502 1_555 C NE2 HIS 63 C HIS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc16 H ZN ZN . B ZN 502 1_555 D OD2 ASP 74 D ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc17 C SD MET 7 C MET 7 1_555 I FE HEM . C HEM 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc18 C NE2 HIS 73 C HIS 73 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc19 C NE2 HIS 77 C HIS 77 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc20 C NE2 HIS 102 C HIS 102 1_555 I FE HEM . C HEM 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc21 D SD MET 7 D MET 7 1_555 K FE HEM . D HEM 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc22 D NE2 HIS 73 D HIS 73 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc23 D NE2 HIS 77 D HIS 77 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc24 D NE2 HIS 102 D HIS 102 1_555 K FE HEM . D HEM 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     2QLA 
_atom_sites.fract_transf_matrix[1][1]    0.011238 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015002 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014514 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 150 150 HEM HEM . 
F 3 ZN A 1 500 500 ZN ZN . 
G 2 HEM B 1 151 151 HEM HEM . 
H 3 ZN B 1 502 502 ZN ZN . 
I 2 HEM C 1 152 152 HEM HEM . 
J 3 ZN C 1 501 501 ZN ZN . 
K 2 HEM D 1 153 153 HEM HEM . 
L 3 ZN D 1 503 503 ZN ZN . 
M 4 HOH A 1 600 600 HOH HOH . 
M 4 HOH A 2 601 601 HOH HOH . 
M 4 HOH A 3 611 611 HOH HOH . 
M 4 HOH A 4 613 613 HOH HOH . 
M 4 HOH A 5 615 615 HOH HOH . 
M 4 HOH A 6 617 617 HOH HOH . 
M 4 HOH A 7 626 626 HOH HOH . 
N 4 HOH B 1 604 604 HOH HOH . 
N 4 HOH B 2 605 605 HOH HOH . 
N 4 HOH B 3 612 612 HOH HOH . 
N 4 HOH B 4 616 616 HOH HOH . 
N 4 HOH B 5 619 619 HOH HOH . 
N 4 HOH B 6 620 620 HOH HOH . 
N 4 HOH B 7 623 623 HOH HOH . 
N 4 HOH B 8 625 625 HOH HOH . 
N 4 HOH B 9 627 627 HOH HOH . 
O 4 HOH C 1 608 608 HOH HOH . 
O 4 HOH C 2 610 610 HOH HOH . 
O 4 HOH C 3 614 614 HOH HOH . 
O 4 HOH C 4 618 618 HOH HOH . 
O 4 HOH C 5 628 628 HOH HOH . 
O 4 HOH C 6 629 629 HOH HOH . 
P 4 HOH D 1 602 602 HOH HOH . 
P 4 HOH D 2 603 603 HOH HOH . 
P 4 HOH D 3 606 606 HOH HOH . 
P 4 HOH D 4 607 607 HOH HOH . 
P 4 HOH D 5 609 609 HOH HOH . 
P 4 HOH D 6 621 621 HOH HOH . 
P 4 HOH D 7 622 622 HOH HOH . 
P 4 HOH D 8 624 624 HOH HOH . 
P 4 HOH D 9 630 630 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . K 2 20.949 8.236 41.847 1 35.57 ? CHA HEM 153 D 1 
HETATM 2 C CHB HEM . . . K 2 24.268 10.433 39.186 1 33.36 ? CHB HEM 153 D 1 
HETATM 3 C CHC HEM . . . K 2 21.646 9.678 35.235 1 33.29 ? CHC HEM 153 D 1 
HETATM 4 C CHD HEM . . . K 2 18.315 7.457 37.864 1 34.75 ? CHD HEM 153 D 1 
HETATM 5 C C1A HEM . . . K 2 22.085 8.969 41.538 1 38.14 ? C1A HEM 153 D 1 
HETATM 6 C C2A HEM . . . K 2 23.248 9.314 42.43 1 40.9 ? C2A HEM 153 D 1 
HETATM 7 C C3A HEM . . . K 2 24.161 9.916 41.599 1 38.26 ? C3A HEM 153 D 1 
HETATM 8 C C4A HEM . . . K 2 23.605 9.957 40.272 1 35.85 ? C4A HEM 153 D 1 
HETATM 9 C CMA HEM . . . K 2 25.534 10.434 42 1 37.86 ? CMA HEM 153 D 1 
HETATM 10 C CAA HEM . . . K 2 23.553 9.147 43.933 1 44.62 ? CAA HEM 153 D 1 
HETATM 11 C CBA HEM . . . K 2 22.681 8.373 44.921 1 52.51 ? CBA HEM 153 D 1 
HETATM 12 C CGA HEM . . . K 2 23.071 6.909 45.058 1 55.48 ? CGA HEM 153 D 1 
HETATM 13 O O1A HEM . . . K 2 23.035 6.183 44.044 1 58.26 ? O1A HEM 153 D 1 
HETATM 14 O O2A HEM . . . K 2 23.41 6.485 46.187 1 58.91 ? O2A HEM 153 D 1 
HETATM 15 C C1B HEM . . . K 2 23.835 10.418 37.892 1 32.76 ? C1B HEM 153 D 1 
HETATM 16 C C2B HEM . . . K 2 24.627 10.959 36.803 1 33.24 ? C2B HEM 153 D 1 
HETATM 17 C C3B HEM . . . K 2 23.889 10.774 35.668 1 34.33 ? C3B HEM 153 D 1 
HETATM 18 C C4B HEM . . . K 2 22.653 10.089 36.1 1 34.36 ? C4B HEM 153 D 1 
HETATM 19 C CMB HEM . . . K 2 26.021 11.592 36.895 1 30.72 ? CMB HEM 153 D 1 
HETATM 20 C CAB HEM . . . K 2 24.21 11.235 34.385 1 32.6 ? CAB HEM 153 D 1 
HETATM 21 C CBB HEM . . . K 2 25.423 11.012 33.747 1 30.98 ? CBB HEM 153 D 1 
HETATM 22 C C1C HEM . . . K 2 20.473 9.014 35.579 1 33.44 ? C1C HEM 153 D 1 
HETATM 23 C C2C HEM . . . K 2 19.421 8.601 34.653 1 32.68 ? C2C HEM 153 D 1 
HETATM 24 C C3C HEM . . . K 2 18.447 7.981 35.4 1 32.76 ? C3C HEM 153 D 1 
HETATM 25 C C4C HEM . . . K 2 18.929 8.016 36.773 1 33.53 ? C4C HEM 153 D 1 
HETATM 26 C CMC HEM . . . K 2 19.409 8.798 33.129 1 32.75 ? CMC HEM 153 D 1 
HETATM 27 C CAC HEM . . . K 2 17.222 7.43 34.957 1 34.17 ? CAC HEM 153 D 1 
HETATM 28 C CBC HEM . . . K 2 17.007 6.628 33.824 1 30.4 ? CBC HEM 153 D 1 
HETATM 29 C C1D HEM . . . K 2 18.77 7.456 39.167 1 35.45 ? C1D HEM 153 D 1 
HETATM 30 C C2D HEM . . . K 2 18.067 6.793 40.246 1 37.2 ? C2D HEM 153 D 1 
HETATM 31 C C3D HEM . . . K 2 18.794 6.993 41.375 1 38.17 ? C3D HEM 153 D 1 
HETATM 32 C C4D HEM . . . K 2 19.954 7.802 40.977 1 36.34 ? C4D HEM 153 D 1 
HETATM 33 C CMD HEM . . . K 2 16.767 6.008 40.115 1 37.53 ? CMD HEM 153 D 1 
HETATM 34 C CAD HEM . . . K 2 18.478 6.403 42.748 1 42.8 ? CAD HEM 153 D 1 
HETATM 35 C CBD HEM . . . K 2 19.429 5.242 43.048 1 51.64 ? CBD HEM 153 D 1 
HETATM 36 C CGD HEM . . . K 2 19.29 4.686 44.466 1 56.78 ? CGD HEM 153 D 1 
HETATM 37 O O1D HEM . . . K 2 18.309 3.946 44.739 1 58.49 ? O1D HEM 153 D 1 
HETATM 38 O O2D HEM . . . K 2 20.171 4.995 45.308 1 57.87 ? O2D HEM 153 D 1 
HETATM 39 N NA HEM . . . K 2 22.342 9.387 40.236 1 37.49 ? NA HEM 153 D 1 
HETATM 40 N NB HEM . . . K 2 22.641 9.896 37.467 1 32.68 ? NB HEM 153 D 1 
HETATM 41 N NC HEM . . . K 2 20.145 8.649 36.872 1 34.85 ? NC HEM 153 D 1 
HETATM 42 N ND HEM . . . K 2 19.927 8.062 39.614 1 34.42 ? ND HEM 153 D 1 
HETATM 43 FE FE HEM . . . K 2 21.176 9.087 38.6 1 37.33 ? FE HEM 153 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           219 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#