data_2QLA # _model_server_result.job_id O8hQEIspL4-7XhzPKS_rAQ _model_server_result.datetime_utc '2024-11-23 15:06:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qla # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":503}' # _entry.id 2QLA # _exptl.entry_id 2QLA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QLA _cell.length_a 88.984 _cell.length_b 66.659 _cell.length_c 68.901 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QLA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SD MET 7 A MET 7 1_555 E FE HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc2 A NE2 HIS 63 A HIS 63 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc3 A NE2 HIS 73 A HIS 73 1_555 F ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc4 A OD2 ASP 74 A ASP 74 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc5 A NE2 HIS 77 A HIS 77 1_555 F ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc6 A NE2 HIS 102 A HIS 102 1_555 E FE HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc7 F ZN ZN . A ZN 500 1_555 C OD2 ASP 74 C ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc8 F ZN ZN . A ZN 500 1_555 D NE2 HIS 63 D HIS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc9 B SD MET 7 B MET 7 1_555 G FE HEM . B HEM 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc10 B NE2 HIS 63 B HIS 63 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc11 B NE2 HIS 73 B HIS 73 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc12 B OD2 ASP 74 B ASP 74 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc13 B NE2 HIS 77 B HIS 77 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc14 B NE2 HIS 102 B HIS 102 1_555 G FE HEM . B HEM 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc15 H ZN ZN . B ZN 502 1_555 C NE2 HIS 63 C HIS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc16 H ZN ZN . B ZN 502 1_555 D OD2 ASP 74 D ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc17 C SD MET 7 C MET 7 1_555 I FE HEM . C HEM 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc18 C NE2 HIS 73 C HIS 73 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc19 C NE2 HIS 77 C HIS 77 1_555 J ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc20 C NE2 HIS 102 C HIS 102 1_555 I FE HEM . C HEM 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc21 D SD MET 7 D MET 7 1_555 K FE HEM . D HEM 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc22 D NE2 HIS 73 D HIS 73 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc23 D NE2 HIS 77 D HIS 77 1_555 L ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc24 D NE2 HIS 102 D HIS 102 1_555 K FE HEM . D HEM 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QLA _atom_sites.fract_transf_matrix[1][1] 0.011238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014514 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM A 1 150 150 HEM HEM . F 3 ZN A 1 500 500 ZN ZN . G 2 HEM B 1 151 151 HEM HEM . H 3 ZN B 1 502 502 ZN ZN . I 2 HEM C 1 152 152 HEM HEM . J 3 ZN C 1 501 501 ZN ZN . K 2 HEM D 1 153 153 HEM HEM . L 3 ZN D 1 503 503 ZN ZN . M 4 HOH A 1 600 600 HOH HOH . M 4 HOH A 2 601 601 HOH HOH . M 4 HOH A 3 611 611 HOH HOH . M 4 HOH A 4 613 613 HOH HOH . M 4 HOH A 5 615 615 HOH HOH . M 4 HOH A 6 617 617 HOH HOH . M 4 HOH A 7 626 626 HOH HOH . N 4 HOH B 1 604 604 HOH HOH . N 4 HOH B 2 605 605 HOH HOH . N 4 HOH B 3 612 612 HOH HOH . N 4 HOH B 4 616 616 HOH HOH . N 4 HOH B 5 619 619 HOH HOH . N 4 HOH B 6 620 620 HOH HOH . N 4 HOH B 7 623 623 HOH HOH . N 4 HOH B 8 625 625 HOH HOH . N 4 HOH B 9 627 627 HOH HOH . O 4 HOH C 1 608 608 HOH HOH . O 4 HOH C 2 610 610 HOH HOH . O 4 HOH C 3 614 614 HOH HOH . O 4 HOH C 4 618 618 HOH HOH . O 4 HOH C 5 628 628 HOH HOH . O 4 HOH C 6 629 629 HOH HOH . P 4 HOH D 1 602 602 HOH HOH . P 4 HOH D 2 603 603 HOH HOH . P 4 HOH D 3 606 606 HOH HOH . P 4 HOH D 4 607 607 HOH HOH . P 4 HOH D 5 609 609 HOH HOH . P 4 HOH D 6 621 621 HOH HOH . P 4 HOH D 7 622 622 HOH HOH . P 4 HOH D 8 624 624 HOH HOH . P 4 HOH D 9 630 630 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 28.855 _atom_site.Cartn_y 6.65 _atom_site.Cartn_z 16.008 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 503 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #