data_2QLK # _model_server_result.job_id DGdTZdjd7KGEcQhmmuulMA _model_server_result.datetime_utc '2024-10-13 10:21:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qlk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 2QLK # _exptl.entry_id 2QLK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QLK _cell.length_a 87.831 _cell.length_b 87.831 _cell.length_c 53.897 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QLK _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2QLK _atom_sites.fract_transf_matrix[1][1] 0.011386 _atom_sites.fract_transf_matrix[1][2] 0.006573 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 301 GOL GOL . C 3 HOH A 1 302 211 HOH TIP . C 3 HOH A 2 303 212 HOH TIP . C 3 HOH A 3 304 213 HOH TIP . C 3 HOH A 4 305 214 HOH TIP . C 3 HOH A 5 306 215 HOH TIP . C 3 HOH A 6 307 216 HOH TIP . C 3 HOH A 7 308 217 HOH TIP . C 3 HOH A 8 309 218 HOH TIP . C 3 HOH A 9 310 219 HOH TIP . C 3 HOH A 10 311 220 HOH TIP . C 3 HOH A 11 312 221 HOH TIP . C 3 HOH A 12 313 222 HOH TIP . C 3 HOH A 13 314 223 HOH TIP . C 3 HOH A 14 315 224 HOH TIP . C 3 HOH A 15 316 225 HOH TIP . C 3 HOH A 16 317 226 HOH TIP . C 3 HOH A 17 318 227 HOH TIP . C 3 HOH A 18 319 228 HOH TIP . C 3 HOH A 19 320 229 HOH TIP . C 3 HOH A 20 321 230 HOH TIP . C 3 HOH A 21 322 231 HOH TIP . C 3 HOH A 22 323 232 HOH TIP . C 3 HOH A 23 324 233 HOH TIP . C 3 HOH A 24 325 234 HOH TIP . C 3 HOH A 25 326 235 HOH TIP . C 3 HOH A 26 327 236 HOH TIP . C 3 HOH A 27 328 237 HOH TIP . C 3 HOH A 28 329 238 HOH TIP . C 3 HOH A 29 330 239 HOH TIP . C 3 HOH A 30 331 240 HOH TIP . C 3 HOH A 31 332 241 HOH TIP . C 3 HOH A 32 333 242 HOH TIP . C 3 HOH A 33 334 243 HOH TIP . C 3 HOH A 34 335 244 HOH TIP . C 3 HOH A 35 336 245 HOH TIP . C 3 HOH A 36 337 246 HOH TIP . C 3 HOH A 37 338 247 HOH TIP . C 3 HOH A 38 339 248 HOH TIP . C 3 HOH A 39 340 249 HOH TIP . C 3 HOH A 40 341 250 HOH TIP . C 3 HOH A 41 342 251 HOH TIP . C 3 HOH A 42 343 252 HOH TIP . C 3 HOH A 43 344 253 HOH TIP . C 3 HOH A 44 345 254 HOH TIP . C 3 HOH A 45 346 255 HOH TIP . C 3 HOH A 46 347 256 HOH TIP . C 3 HOH A 47 348 257 HOH TIP . C 3 HOH A 48 349 258 HOH TIP . C 3 HOH A 49 350 259 HOH TIP . C 3 HOH A 50 351 260 HOH TIP . C 3 HOH A 51 352 261 HOH TIP . C 3 HOH A 52 353 262 HOH TIP . C 3 HOH A 53 354 263 HOH TIP . C 3 HOH A 54 355 264 HOH TIP . C 3 HOH A 55 356 265 HOH TIP . C 3 HOH A 56 357 266 HOH TIP . C 3 HOH A 57 358 267 HOH TIP . C 3 HOH A 58 359 268 HOH TIP . C 3 HOH A 59 360 269 HOH TIP . C 3 HOH A 60 361 270 HOH TIP . C 3 HOH A 61 362 271 HOH TIP . C 3 HOH A 62 363 272 HOH TIP . C 3 HOH A 63 364 273 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 2.124 4.119 2.283 1 48.25 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . B 2 0.707 4.077 1.465 1 43.13 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . B 2 2.658 3.234 3.445 1 50.21 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . B 2 2.668 1.86 2.99 1 51.61 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . B 2 1.714 3.348 4.683 1 51.34 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . B 2 0.369 2.972 4.325 1 53.25 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #