data_2QN6 # _model_server_result.job_id cgCh2q_1XkrcjKM_aPafzg _model_server_result.datetime_utc '2024-11-15 12:49:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qn6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":416}' # _entry.id 2QN6 # _exptl.entry_id 2QN6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.42 _cell.angle_gamma 90 _cell.entry_id 2QN6 _cell.length_a 122.119 _cell.length_b 51.851 _cell.length_c 98.032 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QN6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 59 1_555 A SG CYS 73 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? disulf ? disulf2 A SG CYS 61 A CYS 62 1_555 A SG CYS 76 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc1 A OG1 THR 22 A THR 23 1_555 D MG MG . A MG 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc2 D MG MG . A MG 416 1_555 E O3B GDP . A GDP 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc3 D MG MG . A MG 416 1_555 F O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc4 D MG MG . A MG 416 1_555 F O HOH . A HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc5 D MG MG . A MG 416 1_555 F O HOH . A HOH 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc6 D MG MG . A MG 416 1_555 F O HOH . A HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QN6 _atom_sites.fract_transf_matrix[1][1] 0.008189 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000633 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010231 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG A 1 416 413 MG MG . E 5 GDP A 1 417 412 GDP GDP . F 6 HOH A 1 501 501 HOH HOH . F 6 HOH A 2 502 502 HOH HOH . F 6 HOH A 3 503 503 HOH HOH . F 6 HOH A 4 504 504 HOH HOH . F 6 HOH A 5 505 505 HOH HOH . F 6 HOH A 6 506 506 HOH HOH . F 6 HOH A 7 507 507 HOH HOH . F 6 HOH A 8 508 508 HOH HOH . F 6 HOH A 9 509 509 HOH HOH . F 6 HOH A 10 510 510 HOH HOH . F 6 HOH A 11 511 511 HOH HOH . F 6 HOH A 12 512 512 HOH HOH . F 6 HOH A 13 513 513 HOH HOH . F 6 HOH A 14 514 514 HOH HOH . F 6 HOH A 15 515 515 HOH HOH . F 6 HOH A 16 516 516 HOH HOH . F 6 HOH A 17 517 517 HOH HOH . F 6 HOH A 18 522 522 HOH HOH . F 6 HOH A 19 523 523 HOH HOH . F 6 HOH A 20 524 524 HOH HOH . F 6 HOH A 21 525 525 HOH HOH . F 6 HOH A 22 526 526 HOH HOH . F 6 HOH A 23 528 528 HOH HOH . F 6 HOH A 24 529 529 HOH HOH . F 6 HOH A 25 530 530 HOH HOH . F 6 HOH A 26 531 531 HOH HOH . F 6 HOH A 27 532 532 HOH HOH . F 6 HOH A 28 533 533 HOH HOH . F 6 HOH A 29 534 534 HOH HOH . F 6 HOH A 30 538 538 HOH HOH . F 6 HOH A 31 542 542 HOH HOH . F 6 HOH A 32 545 545 HOH HOH . F 6 HOH A 33 546 546 HOH HOH . F 6 HOH A 34 547 547 HOH HOH . F 6 HOH A 35 548 548 HOH HOH . F 6 HOH A 36 549 549 HOH HOH . F 6 HOH A 37 551 551 HOH HOH . F 6 HOH A 38 552 552 HOH HOH . F 6 HOH A 39 553 553 HOH HOH . F 6 HOH A 40 554 554 HOH HOH . F 6 HOH A 41 555 555 HOH HOH . F 6 HOH A 42 556 556 HOH HOH . F 6 HOH A 43 558 558 HOH HOH . F 6 HOH A 44 559 559 HOH HOH . F 6 HOH A 45 560 560 HOH HOH . F 6 HOH A 46 561 561 HOH HOH . F 6 HOH A 47 562 562 HOH HOH . F 6 HOH A 48 563 563 HOH HOH . F 6 HOH A 49 564 564 HOH HOH . F 6 HOH A 50 565 565 HOH HOH . F 6 HOH A 51 566 566 HOH HOH . F 6 HOH A 52 567 567 HOH HOH . F 6 HOH A 53 568 568 HOH HOH . F 6 HOH A 54 569 569 HOH HOH . F 6 HOH A 55 570 570 HOH HOH . F 6 HOH A 56 571 571 HOH HOH . F 6 HOH A 57 572 572 HOH HOH . F 6 HOH A 58 573 573 HOH HOH . F 6 HOH A 59 574 574 HOH HOH . F 6 HOH A 60 575 575 HOH HOH . F 6 HOH A 61 576 576 HOH HOH . F 6 HOH A 62 577 577 HOH HOH . F 6 HOH A 63 578 578 HOH HOH . F 6 HOH A 64 579 579 HOH HOH . F 6 HOH A 65 580 580 HOH HOH . F 6 HOH A 66 581 581 HOH HOH . F 6 HOH A 67 582 582 HOH HOH . F 6 HOH A 68 583 583 HOH HOH . F 6 HOH A 69 584 584 HOH HOH . F 6 HOH A 70 585 585 HOH HOH . F 6 HOH A 71 586 586 HOH HOH . F 6 HOH A 72 587 587 HOH HOH . F 6 HOH A 73 588 588 HOH HOH . F 6 HOH A 74 589 589 HOH HOH . F 6 HOH A 75 591 591 HOH HOH . F 6 HOH A 76 592 592 HOH HOH . F 6 HOH A 77 593 593 HOH HOH . F 6 HOH A 78 594 594 HOH HOH . F 6 HOH A 79 595 595 HOH HOH . F 6 HOH A 80 596 596 HOH HOH . F 6 HOH A 81 597 597 HOH HOH . F 6 HOH A 82 599 599 HOH HOH . F 6 HOH A 83 600 600 HOH HOH . F 6 HOH A 84 603 603 HOH HOH . F 6 HOH A 85 604 604 HOH HOH . F 6 HOH A 86 605 605 HOH HOH . F 6 HOH A 87 606 606 HOH HOH . F 6 HOH A 88 607 607 HOH HOH . F 6 HOH A 89 609 609 HOH HOH . F 6 HOH A 90 610 610 HOH HOH . F 6 HOH A 91 611 611 HOH HOH . F 6 HOH A 92 612 612 HOH HOH . F 6 HOH A 93 614 614 HOH HOH . F 6 HOH A 94 616 616 HOH HOH . F 6 HOH A 95 617 617 HOH HOH . F 6 HOH A 96 618 618 HOH HOH . F 6 HOH A 97 619 619 HOH HOH . F 6 HOH A 98 620 620 HOH HOH . F 6 HOH A 99 622 622 HOH HOH . F 6 HOH A 100 623 623 HOH HOH . F 6 HOH A 101 624 624 HOH HOH . F 6 HOH A 102 627 627 HOH HOH . F 6 HOH A 103 630 630 HOH HOH . F 6 HOH A 104 631 631 HOH HOH . F 6 HOH A 105 633 633 HOH HOH . F 6 HOH A 106 636 636 HOH HOH . F 6 HOH A 107 637 637 HOH HOH . F 6 HOH A 108 638 638 HOH HOH . F 6 HOH A 109 639 639 HOH HOH . F 6 HOH A 110 640 640 HOH HOH . F 6 HOH A 111 641 641 HOH HOH . F 6 HOH A 112 643 643 HOH HOH . F 6 HOH A 113 644 644 HOH HOH . F 6 HOH A 114 645 645 HOH HOH . F 6 HOH A 115 647 647 HOH HOH . F 6 HOH A 116 648 648 HOH HOH . F 6 HOH A 117 649 649 HOH HOH . F 6 HOH A 118 650 650 HOH HOH . F 6 HOH A 119 651 651 HOH HOH . F 6 HOH A 120 652 652 HOH HOH . F 6 HOH A 121 653 653 HOH HOH . F 6 HOH A 122 654 654 HOH HOH . F 6 HOH A 123 655 655 HOH HOH . F 6 HOH A 124 656 656 HOH HOH . F 6 HOH A 125 657 657 HOH HOH . F 6 HOH A 126 658 658 HOH HOH . F 6 HOH A 127 659 659 HOH HOH . F 6 HOH A 128 660 660 HOH HOH . F 6 HOH A 129 661 661 HOH HOH . F 6 HOH A 130 662 662 HOH HOH . F 6 HOH A 131 663 663 HOH HOH . F 6 HOH A 132 664 664 HOH HOH . F 6 HOH A 133 665 665 HOH HOH . F 6 HOH A 134 669 669 HOH HOH . F 6 HOH A 135 670 670 HOH HOH . F 6 HOH A 136 672 672 HOH HOH . F 6 HOH A 137 673 673 HOH HOH . F 6 HOH A 138 675 675 HOH HOH . F 6 HOH A 139 677 677 HOH HOH . F 6 HOH A 140 678 678 HOH HOH . F 6 HOH A 141 679 679 HOH HOH . F 6 HOH A 142 680 680 HOH HOH . F 6 HOH A 143 682 682 HOH HOH . F 6 HOH A 144 683 683 HOH HOH . F 6 HOH A 145 684 684 HOH HOH . F 6 HOH A 146 685 685 HOH HOH . F 6 HOH A 147 686 686 HOH HOH . F 6 HOH A 148 688 688 HOH HOH . F 6 HOH A 149 689 689 HOH HOH . F 6 HOH A 150 690 690 HOH HOH . F 6 HOH A 151 691 691 HOH HOH . F 6 HOH A 152 692 692 HOH HOH . F 6 HOH A 153 693 693 HOH HOH . F 6 HOH A 154 694 694 HOH HOH . F 6 HOH A 155 695 695 HOH HOH . F 6 HOH A 156 696 696 HOH HOH . F 6 HOH A 157 697 697 HOH HOH . F 6 HOH A 158 698 698 HOH HOH . F 6 HOH A 159 699 699 HOH HOH . F 6 HOH A 160 700 700 HOH HOH . F 6 HOH A 161 702 702 HOH HOH . F 6 HOH A 162 703 703 HOH HOH . F 6 HOH A 163 704 704 HOH HOH . F 6 HOH A 164 705 705 HOH HOH . F 6 HOH A 165 706 706 HOH HOH . F 6 HOH A 166 707 707 HOH HOH . F 6 HOH A 167 709 709 HOH HOH . F 6 HOH A 168 710 710 HOH HOH . F 6 HOH A 169 712 712 HOH HOH . F 6 HOH A 170 714 714 HOH HOH . F 6 HOH A 171 715 715 HOH HOH . F 6 HOH A 172 716 716 HOH HOH . F 6 HOH A 173 717 717 HOH HOH . F 6 HOH A 174 718 718 HOH HOH . F 6 HOH A 175 719 719 HOH HOH . F 6 HOH A 176 720 720 HOH HOH . F 6 HOH A 177 722 722 HOH HOH . F 6 HOH A 178 723 723 HOH HOH . F 6 HOH A 179 724 724 HOH HOH . F 6 HOH A 180 727 727 HOH HOH . F 6 HOH A 181 728 728 HOH HOH . F 6 HOH A 182 729 729 HOH HOH . F 6 HOH A 183 730 730 HOH HOH . F 6 HOH A 184 731 731 HOH HOH . F 6 HOH A 185 732 732 HOH HOH . F 6 HOH A 186 733 733 HOH HOH . F 6 HOH A 187 734 734 HOH HOH . F 6 HOH A 188 735 735 HOH HOH . F 6 HOH A 189 736 736 HOH HOH . F 6 HOH A 190 737 737 HOH HOH . F 6 HOH A 191 739 739 HOH HOH . F 6 HOH A 192 740 740 HOH HOH . F 6 HOH A 193 741 741 HOH HOH . F 6 HOH A 194 743 743 HOH HOH . F 6 HOH A 195 745 745 HOH HOH . F 6 HOH A 196 746 746 HOH HOH . F 6 HOH A 197 749 749 HOH HOH . F 6 HOH A 198 750 750 HOH HOH . F 6 HOH A 199 751 751 HOH HOH . F 6 HOH A 200 752 752 HOH HOH . F 6 HOH A 201 753 753 HOH HOH . G 6 HOH B 1 518 518 HOH HOH . G 6 HOH B 2 519 519 HOH HOH . G 6 HOH B 3 520 520 HOH HOH . G 6 HOH B 4 521 521 HOH HOH . G 6 HOH B 5 527 527 HOH HOH . G 6 HOH B 6 535 535 HOH HOH . G 6 HOH B 7 536 536 HOH HOH . G 6 HOH B 8 537 537 HOH HOH . G 6 HOH B 9 539 539 HOH HOH . G 6 HOH B 10 540 540 HOH HOH . G 6 HOH B 11 541 541 HOH HOH . G 6 HOH B 12 543 543 HOH HOH . G 6 HOH B 13 544 544 HOH HOH . G 6 HOH B 14 550 550 HOH HOH . G 6 HOH B 15 557 557 HOH HOH . G 6 HOH B 16 590 590 HOH HOH . G 6 HOH B 17 598 598 HOH HOH . G 6 HOH B 18 601 601 HOH HOH . G 6 HOH B 19 602 602 HOH HOH . G 6 HOH B 20 608 608 HOH HOH . G 6 HOH B 21 613 613 HOH HOH . G 6 HOH B 22 615 615 HOH HOH . G 6 HOH B 23 621 621 HOH HOH . G 6 HOH B 24 625 625 HOH HOH . G 6 HOH B 25 626 626 HOH HOH . G 6 HOH B 26 628 628 HOH HOH . G 6 HOH B 27 629 629 HOH HOH . G 6 HOH B 28 632 632 HOH HOH . G 6 HOH B 29 634 634 HOH HOH . G 6 HOH B 30 635 635 HOH HOH . G 6 HOH B 31 642 642 HOH HOH . G 6 HOH B 32 646 646 HOH HOH . G 6 HOH B 33 666 666 HOH HOH . G 6 HOH B 34 667 667 HOH HOH . G 6 HOH B 35 668 668 HOH HOH . G 6 HOH B 36 671 671 HOH HOH . G 6 HOH B 37 674 674 HOH HOH . G 6 HOH B 38 676 676 HOH HOH . G 6 HOH B 39 681 681 HOH HOH . G 6 HOH B 40 687 687 HOH HOH . G 6 HOH B 41 701 701 HOH HOH . G 6 HOH B 42 708 708 HOH HOH . G 6 HOH B 43 711 711 HOH HOH . G 6 HOH B 44 725 725 HOH HOH . G 6 HOH B 45 726 726 HOH HOH . G 6 HOH B 46 738 738 HOH HOH . G 6 HOH B 47 742 742 HOH HOH . G 6 HOH B 48 744 744 HOH HOH . G 6 HOH B 49 747 747 HOH HOH . G 6 HOH B 50 748 748 HOH HOH . H 6 HOH C 1 713 713 HOH HOH . H 6 HOH C 2 721 721 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -10.428 _atom_site.Cartn_y -23.919 _atom_site.Cartn_z -20.155 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 416 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #