data_2QND # _model_server_result.job_id G3lFwiema2BfZ55xxNfICw _model_server_result.datetime_utc '2024-12-22 06:11:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qnd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":145}' # _entry.id 2QND # _exptl.entry_id 2QND _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.23 _cell.angle_gamma 90 _cell.entry_id 2QND _cell.length_a 71 _cell.length_b 70.7 _cell.length_c 68.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QND _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 A,B,C,D,E 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 14 A LEU 14 1_555 A N MSE 15 A MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C MSE 15 A MSE 15 1_555 A N GLY 16 A GLY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C GLY 116 A GLY 116 1_555 A N MSE 117 A MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C MSE 117 A MSE 117 1_555 A N VAL 118 A VAL 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 B C LEU 14 B LEU 14 1_555 B N MSE 15 B MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 B C MSE 15 B MSE 15 1_555 B N GLY 16 B GLY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 B C GLY 116 B GLY 116 1_555 B N MSE 117 B MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale8 B C MSE 117 B MSE 117 1_555 B N VAL 118 B VAL 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 C MG MG . A MG 145 1_555 D O HOH . A HOH 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc2 C MG MG . A MG 145 1_555 D O HOH . A HOH 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc3 C MG MG . A MG 145 1_555 D O HOH . A HOH 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QND _atom_sites.fract_transf_matrix[1][1] 0.014083 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004369 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015361 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 145 1 MG MG . D 3 HOH A 1 146 1 HOH HOH . D 3 HOH A 2 147 2 HOH HOH . D 3 HOH A 3 148 5 HOH HOH . D 3 HOH A 4 149 7 HOH HOH . D 3 HOH A 5 150 8 HOH HOH . D 3 HOH A 6 151 9 HOH HOH . D 3 HOH A 7 152 10 HOH HOH . D 3 HOH A 8 153 11 HOH HOH . D 3 HOH A 9 154 12 HOH HOH . D 3 HOH A 10 155 13 HOH HOH . D 3 HOH A 11 156 15 HOH HOH . D 3 HOH A 12 157 17 HOH HOH . D 3 HOH A 13 158 19 HOH HOH . D 3 HOH A 14 159 20 HOH HOH . D 3 HOH A 15 160 21 HOH HOH . D 3 HOH A 16 161 23 HOH HOH . D 3 HOH A 17 162 25 HOH HOH . D 3 HOH A 18 163 26 HOH HOH . D 3 HOH A 19 164 28 HOH HOH . D 3 HOH A 20 165 30 HOH HOH . D 3 HOH A 21 166 33 HOH HOH . D 3 HOH A 22 167 34 HOH HOH . D 3 HOH A 23 168 36 HOH HOH . D 3 HOH A 24 169 37 HOH HOH . D 3 HOH A 25 170 39 HOH HOH . D 3 HOH A 26 171 41 HOH HOH . D 3 HOH A 27 172 43 HOH HOH . D 3 HOH A 28 173 44 HOH HOH . D 3 HOH A 29 174 46 HOH HOH . D 3 HOH A 30 175 47 HOH HOH . D 3 HOH A 31 176 48 HOH HOH . D 3 HOH A 32 177 51 HOH HOH . D 3 HOH A 33 178 52 HOH HOH . D 3 HOH A 34 179 53 HOH HOH . D 3 HOH A 35 180 55 HOH HOH . D 3 HOH A 36 181 59 HOH HOH . D 3 HOH A 37 182 61 HOH HOH . D 3 HOH A 38 183 63 HOH HOH . D 3 HOH A 39 184 64 HOH HOH . D 3 HOH A 40 185 65 HOH HOH . D 3 HOH A 41 186 68 HOH HOH . D 3 HOH A 42 187 69 HOH HOH . D 3 HOH A 43 188 70 HOH HOH . D 3 HOH A 44 189 71 HOH HOH . D 3 HOH A 45 190 72 HOH HOH . D 3 HOH A 46 191 73 HOH HOH . D 3 HOH A 47 192 74 HOH HOH . D 3 HOH A 48 193 75 HOH HOH . D 3 HOH A 49 194 76 HOH HOH . D 3 HOH A 50 195 79 HOH HOH . D 3 HOH A 51 196 80 HOH HOH . D 3 HOH A 52 197 81 HOH HOH . D 3 HOH A 53 198 83 HOH HOH . D 3 HOH A 54 199 85 HOH HOH . D 3 HOH A 55 200 87 HOH HOH . D 3 HOH A 56 201 88 HOH HOH . D 3 HOH A 57 202 89 HOH HOH . D 3 HOH A 58 203 97 HOH HOH . D 3 HOH A 59 204 99 HOH HOH . D 3 HOH A 60 205 101 HOH HOH . D 3 HOH A 61 206 103 HOH HOH . D 3 HOH A 62 207 105 HOH HOH . D 3 HOH A 63 208 108 HOH HOH . D 3 HOH A 64 209 109 HOH HOH . D 3 HOH A 65 210 114 HOH HOH . D 3 HOH A 66 211 115 HOH HOH . D 3 HOH A 67 212 116 HOH HOH . D 3 HOH A 68 213 121 HOH HOH . D 3 HOH A 69 214 125 HOH HOH . D 3 HOH A 70 215 127 HOH HOH . D 3 HOH A 71 216 128 HOH HOH . D 3 HOH A 72 217 130 HOH HOH . D 3 HOH A 73 218 132 HOH HOH . D 3 HOH A 74 219 134 HOH HOH . D 3 HOH A 75 220 135 HOH HOH . D 3 HOH A 76 221 136 HOH HOH . E 3 HOH B 1 145 3 HOH HOH . E 3 HOH B 2 146 4 HOH HOH . E 3 HOH B 3 147 6 HOH HOH . E 3 HOH B 4 148 14 HOH HOH . E 3 HOH B 5 149 16 HOH HOH . E 3 HOH B 6 150 18 HOH HOH . E 3 HOH B 7 151 22 HOH HOH . E 3 HOH B 8 152 24 HOH HOH . E 3 HOH B 9 153 27 HOH HOH . E 3 HOH B 10 154 29 HOH HOH . E 3 HOH B 11 155 31 HOH HOH . E 3 HOH B 12 156 32 HOH HOH . E 3 HOH B 13 157 35 HOH HOH . E 3 HOH B 14 158 38 HOH HOH . E 3 HOH B 15 159 40 HOH HOH . E 3 HOH B 16 160 42 HOH HOH . E 3 HOH B 17 161 45 HOH HOH . E 3 HOH B 18 162 49 HOH HOH . E 3 HOH B 19 163 50 HOH HOH . E 3 HOH B 20 164 54 HOH HOH . E 3 HOH B 21 165 56 HOH HOH . E 3 HOH B 22 166 57 HOH HOH . E 3 HOH B 23 167 58 HOH HOH . E 3 HOH B 24 168 60 HOH HOH . E 3 HOH B 25 169 62 HOH HOH . E 3 HOH B 26 170 66 HOH HOH . E 3 HOH B 27 171 67 HOH HOH . E 3 HOH B 28 172 77 HOH HOH . E 3 HOH B 29 173 78 HOH HOH . E 3 HOH B 30 174 82 HOH HOH . E 3 HOH B 31 175 84 HOH HOH . E 3 HOH B 32 176 86 HOH HOH . E 3 HOH B 33 177 90 HOH HOH . E 3 HOH B 34 178 91 HOH HOH . E 3 HOH B 35 179 92 HOH HOH . E 3 HOH B 36 180 93 HOH HOH . E 3 HOH B 37 181 94 HOH HOH . E 3 HOH B 38 182 95 HOH HOH . E 3 HOH B 39 183 96 HOH HOH . E 3 HOH B 40 184 100 HOH HOH . E 3 HOH B 41 185 104 HOH HOH . E 3 HOH B 42 186 106 HOH HOH . E 3 HOH B 43 187 110 HOH HOH . E 3 HOH B 44 188 111 HOH HOH . E 3 HOH B 45 189 112 HOH HOH . E 3 HOH B 46 190 113 HOH HOH . E 3 HOH B 47 191 117 HOH HOH . E 3 HOH B 48 192 118 HOH HOH . E 3 HOH B 49 193 119 HOH HOH . E 3 HOH B 50 194 120 HOH HOH . E 3 HOH B 51 195 122 HOH HOH . E 3 HOH B 52 196 123 HOH HOH . E 3 HOH B 53 197 124 HOH HOH . E 3 HOH B 54 198 126 HOH HOH . E 3 HOH B 55 199 129 HOH HOH . E 3 HOH B 56 200 131 HOH HOH . E 3 HOH B 57 201 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 46.026 _atom_site.Cartn_y 39.215 _atom_site.Cartn_z -0.266 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 145 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 652 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #