data_2QNQ # _model_server_result.job_id t5YuLh2P6dTL8bp3KY3AEQ _model_server_result.datetime_utc '2024-11-21 21:42:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qnq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2501}' # _entry.id 2QNQ # _exptl.entry_id 2QNQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'synthesized in the lab of Dr. W.E. Diederich.' _entity.formula_weight 630.605 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(3S,4S)-pyrrolidine-3,4-diylbis(N-benzyl-2-chlorobenzenesulfonamide)" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QNQ _cell.length_a 57.564 _cell.length_b 85.903 _cell.length_c 46.538 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QNQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H29 Cl2 N3 O4 S2' _chem_comp.formula_weight 630.605 _chem_comp.id QN3 _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(3S,4S)-pyrrolidine-3,4-diylbis(N-benzyl-2-chlorobenzenesulfonamide)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O41 S8 QN3 doub 277 n n C29 C13 QN3 doub 278 n y C29 C31 QN3 sing 279 n y CL1 C17 QN3 sing 280 n n C13 C12 QN3 sing 281 n y C31 C30 QN3 doub 282 n y C17 C1 QN3 doub 283 n y C17 C26 QN3 sing 284 n y C12 C7 QN3 sing 285 n n C12 C14 QN3 doub 286 n y C30 C14 QN3 sing 287 n y C1 C4 QN3 sing 288 n y S8 C26 QN3 sing 289 n n S8 O10 QN3 doub 290 n n S8 N28 QN3 sing 291 n n C7 N28 QN3 sing 292 n n C26 C19 QN3 doub 293 n y C4 C3 QN3 doub 294 n y C19 C3 QN3 sing 295 n y N28 C23 QN3 sing 296 n n CL3 C20 QN3 sing 297 n n O11 S9 QN3 doub 298 n n C23 C24 QN3 sing 299 n n C23 C21 QN3 sing 300 n n C24 C25 QN3 sing 301 n n C24 N32 QN3 sing 302 n n C21 N22 QN3 sing 303 n n N22 C25 QN3 sing 304 n n C20 C5 QN3 doub 305 n y C20 C27 QN3 sing 306 n y S9 N32 QN3 sing 307 n n S9 C27 QN3 sing 308 n n S9 O40 QN3 doub 309 n n N32 C33 QN3 sing 310 n n C36 C35 QN3 doub 311 n y C36 C37 QN3 sing 312 n y C5 C6 QN3 sing 313 n y C35 C34 QN3 sing 314 n y C27 C18 QN3 doub 315 n y C37 C39 QN3 doub 316 n y C34 C33 QN3 sing 317 n n C34 C38 QN3 doub 318 n y C6 C2 QN3 doub 319 n y C18 C2 QN3 sing 320 n y C39 C38 QN3 sing 321 n y C2 H2 QN3 sing 322 n n C6 H6 QN3 sing 323 n n C5 H5 QN3 sing 324 n n C24 H24 QN3 sing 325 n n C23 H23 QN3 sing 326 n n C19 H19 QN3 sing 327 n n C3 H3 QN3 sing 328 n n C4 H4 QN3 sing 329 n n C1 H1 QN3 sing 330 n n C7 H71 QN3 sing 331 n n C7 H72 QN3 sing 332 n n C13 H13 QN3 sing 333 n n C29 H29 QN3 sing 334 n n C31 H31 QN3 sing 335 n n C30 H30 QN3 sing 336 n n C14 H14 QN3 sing 337 n n C21 H211 QN3 sing 338 n n C21 H212 QN3 sing 339 n n N22 HN22 QN3 sing 340 n n C25 H251 QN3 sing 341 n n C25 H252 QN3 sing 342 n n C33 H331 QN3 sing 343 n n C33 H332 QN3 sing 344 n n C35 H35 QN3 sing 345 n n C36 H36 QN3 sing 346 n n C37 H37 QN3 sing 347 n n C39 H39 QN3 sing 348 n n C38 H38 QN3 sing 349 n n C18 H18 QN3 sing 350 n n # _atom_sites.entry_id 2QNQ _atom_sites.fract_transf_matrix[1][1] 0.017372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021488 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 2602 2602 CL CL . D 3 QN3 A 1 2501 2501 QN3 LIG . E 2 CL B 1 2601 2601 CL CL . F 2 CL B 1 2603 2603 CL CL . G 4 HOH A 1 3003 3003 HOH HOH . G 4 HOH A 2 3005 3005 HOH HOH . G 4 HOH A 3 3015 3015 HOH HOH . G 4 HOH A 4 3016 3016 HOH HOH . G 4 HOH A 5 3019 3019 HOH HOH . G 4 HOH A 6 3020 3020 HOH HOH . G 4 HOH A 7 3021 3021 HOH HOH . G 4 HOH A 8 3023 3023 HOH HOH . G 4 HOH A 9 3024 3024 HOH HOH . G 4 HOH A 10 3026 3026 HOH HOH . G 4 HOH A 11 3027 3027 HOH HOH . G 4 HOH A 12 3031 3031 HOH HOH . G 4 HOH A 13 3032 3032 HOH HOH . G 4 HOH A 14 3033 3033 HOH HOH . G 4 HOH A 15 3034 3034 HOH HOH . G 4 HOH A 16 3037 3037 HOH HOH . G 4 HOH A 17 3041 3041 HOH HOH . G 4 HOH A 18 3042 3042 HOH HOH . G 4 HOH A 19 3043 3043 HOH HOH . G 4 HOH A 20 3047 3047 HOH HOH . G 4 HOH A 21 3050 3050 HOH HOH . G 4 HOH A 22 3051 3051 HOH HOH . G 4 HOH A 23 3052 3052 HOH HOH . G 4 HOH A 24 3053 3053 HOH HOH . G 4 HOH A 25 3054 3054 HOH HOH . G 4 HOH A 26 3056 3056 HOH HOH . G 4 HOH A 27 3057 3057 HOH HOH . G 4 HOH A 28 3058 3058 HOH HOH . G 4 HOH A 29 3060 3060 HOH HOH . G 4 HOH A 30 3061 3061 HOH HOH . G 4 HOH A 31 3064 3064 HOH HOH . G 4 HOH A 32 3069 3069 HOH HOH . H 4 HOH B 1 3001 3001 HOH HOH . H 4 HOH B 2 3002 3002 HOH HOH . H 4 HOH B 3 3004 3004 HOH HOH . H 4 HOH B 4 3006 3006 HOH HOH . H 4 HOH B 5 3007 3007 HOH HOH . H 4 HOH B 6 3008 3008 HOH HOH . H 4 HOH B 7 3009 3009 HOH HOH . H 4 HOH B 8 3010 3010 HOH HOH . H 4 HOH B 9 3011 3011 HOH HOH . H 4 HOH B 10 3012 3012 HOH HOH . H 4 HOH B 11 3013 3013 HOH HOH . H 4 HOH B 12 3014 3014 HOH HOH . H 4 HOH B 13 3017 3017 HOH HOH . H 4 HOH B 14 3018 3018 HOH HOH . H 4 HOH B 15 3022 3022 HOH HOH . H 4 HOH B 16 3025 3025 HOH HOH . H 4 HOH B 17 3028 3028 HOH HOH . H 4 HOH B 18 3029 3029 HOH HOH . H 4 HOH B 19 3030 3030 HOH HOH . H 4 HOH B 20 3035 3035 HOH HOH . H 4 HOH B 21 3036 3036 HOH HOH . H 4 HOH B 22 3038 3038 HOH HOH . H 4 HOH B 23 3039 3039 HOH HOH . H 4 HOH B 24 3040 3040 HOH HOH . H 4 HOH B 25 3044 3044 HOH HOH . H 4 HOH B 26 3045 3045 HOH HOH . H 4 HOH B 27 3046 3046 HOH HOH . H 4 HOH B 28 3048 3048 HOH HOH . H 4 HOH B 29 3049 3049 HOH HOH . H 4 HOH B 30 3055 3055 HOH HOH . H 4 HOH B 31 3059 3059 HOH HOH . H 4 HOH B 32 3062 3062 HOH HOH . H 4 HOH B 33 3063 3063 HOH HOH . H 4 HOH B 34 3065 3065 HOH HOH . H 4 HOH B 35 3066 3066 HOH HOH . H 4 HOH B 36 3067 3067 HOH HOH . H 4 HOH B 37 3068 3068 HOH HOH . H 4 HOH B 38 3070 3070 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 QN3 . . . D 3 -14.737 23.224 -1.764 1 40.85 ? C2 QN3 2501 A 1 HETATM 2 C C6 QN3 . . . D 3 -13.649 23.687 -2.543 1 39.53 ? C6 QN3 2501 A 1 HETATM 3 C C5 QN3 . . . D 3 -13.749 23.688 -3.956 1 39.86 ? C5 QN3 2501 A 1 HETATM 4 C C20 QN3 . . . D 3 -14.934 23.233 -4.606 1 40.89 ? C20 QN3 2501 A 1 HETATM 5 C C27 QN3 . . . D 3 -16.049 22.761 -3.834 1 41.04 ? C27 QN3 2501 A 1 HETATM 6 S S9 QN3 . . . D 3 -17.644 22.156 -4.474 1 41.29 ? S9 QN3 2501 A 1 HETATM 7 N N32 QN3 . . . D 3 -17.377 20.435 -4.104 1 39.74 ? N32 QN3 2501 A 1 HETATM 8 C C24 QN3 . . . D 3 -16.499 19.696 -5.068 1 38.66 ? C24 QN3 2501 A 1 HETATM 9 C C23 QN3 . . . D 3 -17.12 18.386 -5.696 1 38.45 ? C23 QN3 2501 A 1 HETATM 10 N N28 QN3 . . . D 3 -17.073 18.383 -7.191 1 38.4 ? N28 QN3 2501 A 1 HETATM 11 S S8 QN3 . . . D 3 -18.545 18.702 -8.064 1 38.24 ? S8 QN3 2501 A 1 HETATM 12 O O10 QN3 . . . D 3 -19.097 19.932 -7.532 1 38.7 ? O10 QN3 2501 A 1 HETATM 13 O O41 QN3 . . . D 3 -18.224 18.693 -9.49 1 38.8 ? O41 QN3 2501 A 1 HETATM 14 C C26 QN3 . . . D 3 -19.746 17.373 -7.862 1 35.17 ? C26 QN3 2501 A 1 HETATM 15 C C19 QN3 . . . D 3 -20.968 17.669 -7.192 1 34.38 ? C19 QN3 2501 A 1 HETATM 16 C C3 QN3 . . . D 3 -21.969 16.672 -7.009 1 37.08 ? C3 QN3 2501 A 1 HETATM 17 C C4 QN3 . . . D 3 -21.756 15.352 -7.502 1 36.97 ? C4 QN3 2501 A 1 HETATM 18 C C1 QN3 . . . D 3 -20.542 15.036 -8.176 1 36.11 ? C1 QN3 2501 A 1 HETATM 19 C C17 QN3 . . . D 3 -19.536 16.035 -8.36 1 34.92 ? C17 QN3 2501 A 1 HETATM 20 CL CL1 QN3 . . . D 3 -18.079 15.579 -9.203 1 30.88 ? CL1 QN3 2501 A 1 HETATM 21 C C7 QN3 . . . D 3 -15.845 18.091 -7.974 1 38.18 ? C7 QN3 2501 A 1 HETATM 22 C C12 QN3 . . . D 3 -14.958 19.325 -8.284 1 37.61 ? C12 QN3 2501 A 1 HETATM 23 C C13 QN3 . . . D 3 -15.498 20.447 -8.985 1 36.21 ? C13 QN3 2501 A 1 HETATM 24 C C29 QN3 . . . D 3 -14.686 21.577 -9.282 1 35.46 ? C29 QN3 2501 A 1 HETATM 25 C C31 QN3 . . . D 3 -13.32 21.6 -8.878 1 37.6 ? C31 QN3 2501 A 1 HETATM 26 C C30 QN3 . . . D 3 -12.771 20.489 -8.177 1 35.79 ? C30 QN3 2501 A 1 HETATM 27 C C14 QN3 . . . D 3 -13.586 19.362 -7.884 1 36.65 ? C14 QN3 2501 A 1 HETATM 28 C C21 QN3 . . . D 3 -16.331 17.26 -4.976 1 37.17 ? C21 QN3 2501 A 1 HETATM 29 N N22 QN3 . . . D 3 -14.982 17.816 -4.706 1 36.25 ? N22 QN3 2501 A 1 HETATM 30 C C25 QN3 . . . D 3 -15.136 19.267 -4.452 1 37.96 ? C25 QN3 2501 A 1 HETATM 31 C C33 QN3 . . . D 3 -18.009 19.816 -2.912 1 37.7 ? C33 QN3 2501 A 1 HETATM 32 C C34 QN3 . . . D 3 -19.398 19.189 -3.037 1 37.41 ? C34 QN3 2501 A 1 HETATM 33 C C35 QN3 . . . D 3 -20.368 19.7 -3.938 1 36.98 ? C35 QN3 2501 A 1 HETATM 34 C C36 QN3 . . . D 3 -21.656 19.094 -4.018 1 39.24 ? C36 QN3 2501 A 1 HETATM 35 C C37 QN3 . . . D 3 -21.981 17.972 -3.197 1 38.88 ? C37 QN3 2501 A 1 HETATM 36 C C39 QN3 . . . D 3 -21.011 17.458 -2.294 1 39.39 ? C39 QN3 2501 A 1 HETATM 37 C C38 QN3 . . . D 3 -19.727 18.066 -2.216 1 37.2 ? C38 QN3 2501 A 1 HETATM 38 O O11 QN3 . . . D 3 -17.733 22.225 -5.926 1 40.93 ? O11 QN3 2501 A 1 HETATM 39 O O40 QN3 . . . D 3 -18.582 22.787 -3.554 1 40.43 ? O40 QN3 2501 A 1 HETATM 40 C C18 QN3 . . . D 3 -15.921 22.767 -2.405 1 41.73 ? C18 QN3 2501 A 1 HETATM 41 CL CL3 QN3 . . . D 3 -14.955 23.272 -6.327 1 41.02 ? CL3 QN3 2501 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 41 #