data_2QNV # _model_server_result.job_id x95CaKy5hxY-gstVHcx1HA _model_server_result.datetime_utc '2024-11-16 10:42:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qnv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2QNV # _exptl.entry_id 2QNV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 400.551 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,5-dihydroxy-4,6,6-tris(3-methylbut-2-en-1-yl)-2-(2-methylpropanoyl)cyclohexa-2,4-dien-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QNV _cell.length_a 90.865 _cell.length_b 90.865 _cell.length_c 85.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QNV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 85.41 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H36 O4' _chem_comp.formula_weight 400.551 _chem_comp.id CDZ _chem_comp.mon_nstd_flag . _chem_comp.name 3,5-dihydroxy-4,6,6-tris(3-methylbut-2-en-1-yl)-2-(2-methylpropanoyl)cyclohexa-2,4-dien-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CAT CDZ sing 70 n n CAC HAC CDZ sing 71 n n CAC HACA CDZ sing 72 n n CAC HACB CDZ sing 73 n n CAT CAD CDZ sing 74 n n CAT CAN CDZ doub 75 n n CAD HAD CDZ sing 76 n n CAD HADA CDZ sing 77 n n CAD HADB CDZ sing 78 n n CAN CAQ CDZ sing 79 n n CAN HAN CDZ sing 80 n n CAQ CBC CDZ sing 81 n n CAQ HAQ CDZ sing 82 n n CAQ HAQA CDZ sing 83 n n CBC CAR CDZ sing 84 n n CBC CAW CDZ sing 85 n n CBC CAY CDZ sing 86 n n CAR CAO CDZ sing 87 n n CAR HAR CDZ sing 88 n n CAR HARA CDZ sing 89 n n CAO CAU CDZ doub 90 n n CAO HAO CDZ sing 91 n n CAU CAF CDZ sing 92 n n CAU CAE CDZ sing 93 n n CAF HAF CDZ sing 94 n n CAF HAFA CDZ sing 95 n n CAF HAFB CDZ sing 96 n n CAE HAE CDZ sing 97 n n CAE HAEA CDZ sing 98 n n CAE HAEB CDZ sing 99 n n CAW OAJ CDZ sing 100 n n CAW CAZ CDZ doub 101 n n CAY OAL CDZ doub 102 n n CAY CBA CDZ sing 103 n n CBA CAV CDZ sing 104 n n CBA CAX CDZ doub 105 n n CAV OAI CDZ doub 106 n n CAV CBB CDZ sing 107 n n CBB CAH CDZ sing 108 n n CBB CAG CDZ sing 109 n n CBB HBB CDZ sing 110 n n CAH HAH CDZ sing 111 n n CAH HAHA CDZ sing 112 n n CAH HAHB CDZ sing 113 n n CAG HAG CDZ sing 114 n n CAG HAGA CDZ sing 115 n n CAG HAGB CDZ sing 116 n n CAX OAK CDZ sing 117 n n CAX CAZ CDZ sing 118 n n OAK HOAK CDZ sing 119 n n CAZ CAP CDZ sing 120 n n CAP CAM CDZ sing 121 n n CAP HAP CDZ sing 122 n n CAP HAPA CDZ sing 123 n n CAM CAS CDZ doub 124 n n CAM HAM CDZ sing 125 n n CAS CAB CDZ sing 126 n n CAS CAA CDZ sing 127 n n CAB HAB CDZ sing 128 n n CAB HABA CDZ sing 129 n n CAB HABB CDZ sing 130 n n CAA HAA CDZ sing 131 n n CAA HAAA CDZ sing 132 n n CAA HAAB CDZ sing 133 n n OAJ H36 CDZ sing 134 n n # _atom_sites.entry_id 2QNV _atom_sites.fract_transf_matrix[1][1] 0.011005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CDZ A 1 1 1 CDZ DRG . C 3 HOH A 1 435 1 HOH HOH . C 3 HOH A 2 436 2 HOH HOH . C 3 HOH A 3 437 3 HOH HOH . C 3 HOH A 4 438 4 HOH HOH . C 3 HOH A 5 439 5 HOH HOH . C 3 HOH A 6 440 6 HOH HOH . C 3 HOH A 7 441 7 HOH HOH . C 3 HOH A 8 442 8 HOH HOH . C 3 HOH A 9 443 9 HOH HOH . C 3 HOH A 10 444 10 HOH HOH . C 3 HOH A 11 445 11 HOH HOH . C 3 HOH A 12 446 12 HOH HOH . C 3 HOH A 13 447 13 HOH HOH . C 3 HOH A 14 448 14 HOH HOH . C 3 HOH A 15 449 15 HOH HOH . C 3 HOH A 16 450 16 HOH HOH . C 3 HOH A 17 451 17 HOH HOH . C 3 HOH A 18 452 18 HOH HOH . C 3 HOH A 19 453 19 HOH HOH . C 3 HOH A 20 454 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC CDZ . . . B 2 14.134 17.924 21.072 1 69.44 ? CAC CDZ 1 A 1 HETATM 2 C CAT CDZ . . . B 2 12.827 18.662 21.369 1 70.82 ? CAT CDZ 1 A 1 HETATM 3 C CAD CDZ . . . B 2 12.875 20.013 22.087 1 69.63 ? CAD CDZ 1 A 1 HETATM 4 C CAN CDZ . . . B 2 11.599 18.118 21.007 1 70.09 ? CAN CDZ 1 A 1 HETATM 5 C CAQ CDZ . . . B 2 11.389 16.902 20.364 1 68.28 ? CAQ CDZ 1 A 1 HETATM 6 C CBC CDZ . . . B 2 11.122 15.705 21.287 1 68.04 ? CBC CDZ 1 A 1 HETATM 7 C CAR CDZ . . . B 2 9.624 15.377 21.299 1 67.88 ? CAR CDZ 1 A 1 HETATM 8 C CAO CDZ . . . B 2 9.325 14.325 22.162 1 67.18 ? CAO CDZ 1 A 1 HETATM 9 C CAU CDZ . . . B 2 8.479 13.242 21.954 1 66.53 ? CAU CDZ 1 A 1 HETATM 10 C CAF CDZ . . . B 2 7.722 13.078 20.635 1 65.59 ? CAF CDZ 1 A 1 HETATM 11 C CAE CDZ . . . B 2 8.31 12.198 23.059 1 65.47 ? CAE CDZ 1 A 1 HETATM 12 C CAW CDZ . . . B 2 11.584 15.96 22.728 1 67.52 ? CAW CDZ 1 A 1 HETATM 13 O OAJ CDZ . . . B 2 10.836 16.59 23.482 1 63.9 ? OAJ CDZ 1 A 1 HETATM 14 C CAY CDZ . . . B 2 11.859 14.515 20.667 1 67.87 ? CAY CDZ 1 A 1 HETATM 15 O OAL CDZ . . . B 2 11.465 14.076 19.441 1 66.91 ? OAL CDZ 1 A 1 HETATM 16 C CBA CDZ . . . B 2 12.925 13.907 21.332 1 68.31 ? CBA CDZ 1 A 1 HETATM 17 C CAV CDZ . . . B 2 13.688 12.733 20.705 1 67.17 ? CAV CDZ 1 A 1 HETATM 18 O OAI CDZ . . . B 2 14.62 12.221 21.322 1 65.45 ? OAI CDZ 1 A 1 HETATM 19 C CBB CDZ . . . B 2 13.34 12.213 19.308 1 67.65 ? CBB CDZ 1 A 1 HETATM 20 C CAH CDZ . . . B 2 14.531 12.475 18.383 1 67.05 ? CAH CDZ 1 A 1 HETATM 21 C CAG CDZ . . . B 2 13.005 10.721 19.371 1 68 ? CAG CDZ 1 A 1 HETATM 22 C CAX CDZ . . . B 2 13.351 14.366 22.572 1 68.89 ? CAX CDZ 1 A 1 HETATM 23 O OAK CDZ . . . B 2 14.366 13.709 23.192 1 69.53 ? OAK CDZ 1 A 1 HETATM 24 C CAZ CDZ . . . B 2 12.788 15.471 23.22 1 68.7 ? CAZ CDZ 1 A 1 HETATM 25 C CAP CDZ . . . B 2 13.478 16.048 24.459 1 69.38 ? CAP CDZ 1 A 1 HETATM 26 C CAM CDZ . . . B 2 12.869 17.222 24.896 1 72.71 ? CAM CDZ 1 A 1 HETATM 27 C CAS CDZ . . . B 2 12.456 17.52 26.191 1 74.56 ? CAS CDZ 1 A 1 HETATM 28 C CAB CDZ . . . B 2 12.667 16.514 27.325 1 75.65 ? CAB CDZ 1 A 1 HETATM 29 C CAA CDZ . . . B 2 11.793 18.866 26.492 1 74.56 ? CAA CDZ 1 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #