data_2QO4 # _model_server_result.job_id Z8EnMaBQA7lmd4l0YTG00A _model_server_result.datetime_utc '2024-11-14 12:36:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qo4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":130}' # _entry.id 2QO4 # _exptl.entry_id 2QO4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 408.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QO4 _cell.length_a 43.355 _cell.length_b 43.355 _cell.length_c 67.526 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QO4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 81 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 80 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 92 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 91 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.028 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H40 O5' _chem_comp.formula_weight 408.571 _chem_comp.id CHD _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CHD sing 70 n n C1 C10 CHD sing 71 n n C1 H11 CHD sing 72 n n C1 H12A CHD sing 73 n n C2 C3 CHD sing 74 n n C2 H21 CHD sing 75 n n C2 H22 CHD sing 76 n n C3 O3 CHD sing 77 n n C3 C4 CHD sing 78 n n C3 H3 CHD sing 79 n n O3 HO3 CHD sing 80 n n C4 C5 CHD sing 81 n n C4 H41 CHD sing 82 n n C4 H42 CHD sing 83 n n C5 C6 CHD sing 84 n n C5 C10 CHD sing 85 n n C5 H5 CHD sing 86 n n C6 C7 CHD sing 87 n n C6 H61 CHD sing 88 n n C6 H62 CHD sing 89 n n C7 O7 CHD sing 90 n n C7 C8 CHD sing 91 n n C7 H7 CHD sing 92 n n O7 HO7 CHD sing 93 n n C8 C9 CHD sing 94 n n C8 C14 CHD sing 95 n n C8 H8 CHD sing 96 n n C9 C10 CHD sing 97 n n C9 C11 CHD sing 98 n n C9 H9 CHD sing 99 n n C10 C19 CHD sing 100 n n C11 C12 CHD sing 101 n n C11 H111 CHD sing 102 n n C11 H112 CHD sing 103 n n C12 O12 CHD sing 104 n n C12 C13 CHD sing 105 n n C12 H12 CHD sing 106 n n O12 HO12 CHD sing 107 n n C13 C14 CHD sing 108 n n C13 C17 CHD sing 109 n n C13 C18 CHD sing 110 n n C14 C15 CHD sing 111 n n C14 H14 CHD sing 112 n n C15 C16 CHD sing 113 n n C15 H151 CHD sing 114 n n C15 H152 CHD sing 115 n n C16 C17 CHD sing 116 n n C16 H161 CHD sing 117 n n C16 H162 CHD sing 118 n n C17 C20 CHD sing 119 n n C17 H17 CHD sing 120 n n C18 H181 CHD sing 121 n n C18 H182 CHD sing 122 n n C18 H183 CHD sing 123 n n C19 H191 CHD sing 124 n n C19 H192 CHD sing 125 n n C19 H193 CHD sing 126 n n C20 C21 CHD sing 127 n n C20 C22 CHD sing 128 n n C20 H20 CHD sing 129 n n C21 H211 CHD sing 130 n n C21 H212 CHD sing 131 n n C21 H213 CHD sing 132 n n C22 C23 CHD sing 133 n n C22 H221 CHD sing 134 n n C22 H222 CHD sing 135 n n C23 C24 CHD sing 136 n n C23 H231 CHD sing 137 n n C23 H232 CHD sing 138 n n O25 C24 CHD doub 139 n n C24 O26 CHD sing 140 n n O26 H26 CHD sing 141 n n # _atom_sites.entry_id 2QO4 _atom_sites.fract_transf_matrix[1][1] 0.023065 _atom_sites.fract_transf_matrix[1][2] 0.013317 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026633 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CHD A 1 130 130 CHD CHD . C 3 IPA A 1 140 140 IPA IPA . D 3 IPA A 1 141 141 IPA IPA . E 3 IPA A 1 142 142 IPA IPA . F 4 GOL A 1 145 145 GOL GOL . G 5 HOH A 1 146 1 HOH HOH . G 5 HOH A 2 147 2 HOH HOH . G 5 HOH A 3 148 3 HOH HOH . G 5 HOH A 4 149 4 HOH HOH . G 5 HOH A 5 150 5 HOH HOH . G 5 HOH A 6 151 6 HOH HOH . G 5 HOH A 7 152 7 HOH HOH . G 5 HOH A 8 153 8 HOH HOH . G 5 HOH A 9 154 9 HOH HOH . G 5 HOH A 10 155 10 HOH HOH . G 5 HOH A 11 156 11 HOH HOH . G 5 HOH A 12 157 12 HOH HOH . G 5 HOH A 13 158 13 HOH HOH . G 5 HOH A 14 159 14 HOH HOH . G 5 HOH A 15 160 15 HOH HOH . G 5 HOH A 16 161 16 HOH HOH . G 5 HOH A 17 162 17 HOH HOH . G 5 HOH A 18 163 18 HOH HOH . G 5 HOH A 19 164 19 HOH HOH . G 5 HOH A 20 165 20 HOH HOH . G 5 HOH A 21 166 21 HOH HOH . G 5 HOH A 22 167 22 HOH HOH . G 5 HOH A 23 168 23 HOH HOH . G 5 HOH A 24 169 24 HOH HOH . G 5 HOH A 25 170 25 HOH HOH . G 5 HOH A 26 171 26 HOH HOH . G 5 HOH A 27 172 27 HOH HOH . G 5 HOH A 28 173 28 HOH HOH . G 5 HOH A 29 174 29 HOH HOH . G 5 HOH A 30 175 30 HOH HOH . G 5 HOH A 31 176 31 HOH HOH . G 5 HOH A 32 177 32 HOH HOH . G 5 HOH A 33 178 33 HOH HOH . G 5 HOH A 34 179 34 HOH HOH . G 5 HOH A 35 180 35 HOH HOH . G 5 HOH A 36 181 36 HOH HOH . G 5 HOH A 37 182 37 HOH HOH . G 5 HOH A 38 183 38 HOH HOH . G 5 HOH A 39 184 39 HOH HOH . G 5 HOH A 40 185 40 HOH HOH . G 5 HOH A 41 186 41 HOH HOH . G 5 HOH A 42 187 42 HOH HOH . G 5 HOH A 43 188 43 HOH HOH . G 5 HOH A 44 189 44 HOH HOH . G 5 HOH A 45 190 45 HOH HOH . G 5 HOH A 46 191 46 HOH HOH . G 5 HOH A 47 192 47 HOH HOH . G 5 HOH A 48 193 48 HOH HOH . G 5 HOH A 49 194 49 HOH HOH . G 5 HOH A 50 195 50 HOH HOH . G 5 HOH A 51 196 51 HOH HOH . G 5 HOH A 52 197 52 HOH HOH . G 5 HOH A 53 198 53 HOH HOH . G 5 HOH A 54 199 54 HOH HOH . G 5 HOH A 55 200 55 HOH HOH . G 5 HOH A 56 201 56 HOH HOH . G 5 HOH A 57 202 57 HOH HOH . G 5 HOH A 58 203 58 HOH HOH . G 5 HOH A 59 204 59 HOH HOH . G 5 HOH A 60 205 60 HOH HOH . G 5 HOH A 61 206 61 HOH HOH . G 5 HOH A 62 207 62 HOH HOH . G 5 HOH A 63 208 63 HOH HOH . G 5 HOH A 64 209 64 HOH HOH . G 5 HOH A 65 210 65 HOH HOH . G 5 HOH A 66 211 66 HOH HOH . G 5 HOH A 67 212 67 HOH HOH . G 5 HOH A 68 213 68 HOH HOH . G 5 HOH A 69 214 69 HOH HOH . G 5 HOH A 70 215 70 HOH HOH . G 5 HOH A 71 216 71 HOH HOH . G 5 HOH A 72 217 72 HOH HOH . G 5 HOH A 73 218 73 HOH HOH . G 5 HOH A 74 219 74 HOH HOH . G 5 HOH A 75 220 75 HOH HOH . G 5 HOH A 76 221 76 HOH HOH . G 5 HOH A 77 222 77 HOH HOH . G 5 HOH A 78 223 78 HOH HOH . G 5 HOH A 79 224 79 HOH HOH . G 5 HOH A 80 225 80 HOH HOH . G 5 HOH A 81 226 81 HOH HOH . G 5 HOH A 82 227 82 HOH HOH . G 5 HOH A 83 228 83 HOH HOH . G 5 HOH A 84 229 84 HOH HOH . G 5 HOH A 85 230 85 HOH HOH . G 5 HOH A 86 231 86 HOH HOH . G 5 HOH A 87 232 87 HOH HOH . G 5 HOH A 88 233 88 HOH HOH . G 5 HOH A 89 234 89 HOH HOH . G 5 HOH A 90 235 90 HOH HOH . G 5 HOH A 91 236 91 HOH HOH . G 5 HOH A 92 237 92 HOH HOH . G 5 HOH A 93 238 93 HOH HOH . G 5 HOH A 94 239 94 HOH HOH . G 5 HOH A 95 240 95 HOH HOH . G 5 HOH A 96 241 96 HOH HOH . G 5 HOH A 97 242 97 HOH HOH . G 5 HOH A 98 243 98 HOH HOH . G 5 HOH A 99 244 99 HOH HOH . G 5 HOH A 100 245 100 HOH HOH . G 5 HOH A 101 246 101 HOH HOH . G 5 HOH A 102 247 102 HOH HOH . G 5 HOH A 103 248 103 HOH HOH . G 5 HOH A 104 249 104 HOH HOH . G 5 HOH A 105 250 105 HOH HOH . G 5 HOH A 106 251 106 HOH HOH . G 5 HOH A 107 252 107 HOH HOH . G 5 HOH A 108 253 108 HOH HOH . G 5 HOH A 109 254 109 HOH HOH . G 5 HOH A 110 255 110 HOH HOH . G 5 HOH A 111 256 111 HOH HOH . G 5 HOH A 112 257 112 HOH HOH . G 5 HOH A 113 258 113 HOH HOH . G 5 HOH A 114 259 114 HOH HOH . G 5 HOH A 115 260 115 HOH HOH . G 5 HOH A 116 261 116 HOH HOH . G 5 HOH A 117 262 117 HOH HOH . G 5 HOH A 118 263 118 HOH HOH . G 5 HOH A 119 264 119 HOH HOH . G 5 HOH A 120 265 120 HOH HOH . G 5 HOH A 121 266 121 HOH HOH . G 5 HOH A 122 267 122 HOH HOH . G 5 HOH A 123 268 123 HOH HOH . G 5 HOH A 124 269 124 HOH HOH . G 5 HOH A 125 270 125 HOH HOH . G 5 HOH A 126 271 126 HOH HOH . G 5 HOH A 127 272 127 HOH HOH . G 5 HOH A 128 273 128 HOH HOH . G 5 HOH A 129 274 129 HOH HOH . G 5 HOH A 130 275 130 HOH HOH . G 5 HOH A 131 276 131 HOH HOH . G 5 HOH A 132 277 132 HOH HOH . G 5 HOH A 133 278 133 HOH HOH . G 5 HOH A 134 279 134 HOH HOH . G 5 HOH A 135 280 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CHD . . . B 2 -3.9 16.54 3.376 1 5.21 ? C1 CHD 130 A 1 HETATM 2 C C2 CHD . . . B 2 -4.296 16.704 1.903 1 5.16 ? C2 CHD 130 A 1 HETATM 3 C C3 CHD . . . B 2 -4.803 15.388 1.304 1 5.01 ? C3 CHD 130 A 1 HETATM 4 O O3 CHD . . . B 2 -5.041 15.586 -0.099 1 5.82 ? O3 CHD 130 A 1 HETATM 5 C C4 CHD . . . B 2 -3.761 14.273 1.484 1 4.78 ? C4 CHD 130 A 1 HETATM 6 C C5 CHD . . . B 2 -3.293 14.13 2.96 1 4.33 ? C5 CHD 130 A 1 HETATM 7 C C6 CHD . . . B 2 -2.229 13.004 3.077 1 4.65 ? C6 CHD 130 A 1 HETATM 8 C C7 CHD . . . B 2 -0.82 13.434 2.602 1 4.72 ? C7 CHD 130 A 1 HETATM 9 O O7 CHD . . . B 2 -0.77 13.493 1.171 1 4.66 ? O7 CHD 130 A 1 HETATM 10 C C8 CHD . . . B 2 -0.362 14.777 3.21 1 4.84 ? C8 CHD 130 A 1 HETATM 11 C C9 CHD . . . B 2 -1.441 15.882 3.034 1 5.38 ? C9 CHD 130 A 1 HETATM 12 C C10 CHD . . . B 2 -2.826 15.464 3.615 1 5.16 ? C10 CHD 130 A 1 HETATM 13 C C11 CHD . . . B 2 -0.951 17.278 3.523 1 5.22 ? C11 CHD 130 A 1 HETATM 14 C C12 CHD . . . B 2 0.422 17.67 2.919 1 5.31 ? C12 CHD 130 A 1 HETATM 15 O O12 CHD . . . B 2 0.287 17.883 1.502 1 5.27 ? O12 CHD 130 A 1 HETATM 16 C C13 CHD . . . B 2 1.475 16.589 3.233 1 5.06 ? C13 CHD 130 A 1 HETATM 17 C C14 CHD . . . B 2 0.985 15.255 2.623 1 4.99 ? C14 CHD 130 A 1 HETATM 18 C C15 CHD . . . B 2 2.192 14.322 2.811 1 4.91 ? C15 CHD 130 A 1 HETATM 19 C C16 CHD . . . B 2 3.374 15.256 2.487 1 5.4 ? C16 CHD 130 A 1 HETATM 20 C C17 CHD . . . B 2 2.808 16.707 2.44 1 5.58 ? C17 CHD 130 A 1 HETATM 21 C C18 CHD . . . B 2 1.729 16.517 4.764 1 4.56 ? C18 CHD 130 A 1 HETATM 22 C C19 CHD . . . B 2 -2.739 15.264 5.135 1 5.64 ? C19 CHD 130 A 1 HETATM 23 C C20 CHD . . . B 2 3.868 17.733 2.953 1 6.44 ? C20 CHD 130 A 1 HETATM 24 C C21 CHD . . . B 2 3.383 19.196 2.952 1 6.26 ? C21 CHD 130 A 1 HETATM 25 C C22 CHD . . . B 2 5.202 17.614 2.177 1 7.7 ? C22 CHD 130 A 1 HETATM 26 C C23 CHD . . . B 2 5.063 17.97 0.686 1 9.73 ? C23 CHD 130 A 1 HETATM 27 O O25 CHD . . . B 2 7.055 18.885 -0.215 1 12.17 ? O25 CHD 130 A 1 HETATM 28 C C24 CHD . . . B 2 6.396 17.836 -0.048 1 10.72 ? C24 CHD 130 A 1 HETATM 29 O O26 CHD . . . B 2 6.723 16.689 -0.427 1 11.98 ? O26 CHD 130 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 586 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #