data_2QO7 # _model_server_result.job_id gzXSvS0dfcu30m2BFuJoig _model_server_result.datetime_utc '2024-11-16 14:37:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qo7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 2QO7 # _exptl.entry_id 2QO7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.04 _cell.angle_gamma 90 _cell.entry_id 2QO7 _cell.length_a 53.736 _cell.length_b 38.225 _cell.length_c 76.029 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QO7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 126 A GLU 700 1_555 A N PTR 127 A PTR 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C PTR 127 A PTR 701 1_555 A N MET 128 A MET 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 B MG MG . A MG 1 1_555 D O2A ANP . A ANP 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 B MG MG . A MG 1 1_555 D O1G ANP . A ANP 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc3 B MG MG . A MG 1 1_555 D O2B ANP . A ANP 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc4 B MG MG . A MG 1 1_555 G O HOH . A HOH 1094 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc5 B MG MG . A MG 1 1_555 G O HOH . A HOH 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 188 n n C1 C2 GOL sing 189 n n C1 H11 GOL sing 190 n n C1 H12 GOL sing 191 n n O1 HO1 GOL sing 192 n n C2 O2 GOL sing 193 n n C2 C3 GOL sing 194 n n C2 H2 GOL sing 195 n n O2 HO2 GOL sing 196 n n C3 O3 GOL sing 197 n n C3 H31 GOL sing 198 n n C3 H32 GOL sing 199 n n O3 HO3 GOL sing 200 n n # _atom_sites.entry_id 2QO7 _atom_sites.fract_transf_matrix[1][1] 0.018609 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003969 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1 1 MG MG . C 3 BME A 1 948 1 BME SEO . D 4 ANP A 1 1000 1000 ANP ANP . E 5 GOL A 1 1001 1 GOL GOL . F 5 GOL A 1 2 2 GOL GOL . G 6 HOH A 1 1002 1 HOH HOH . G 6 HOH A 2 1003 2 HOH HOH . G 6 HOH A 3 1004 3 HOH HOH . G 6 HOH A 4 1005 4 HOH HOH . G 6 HOH A 5 1006 5 HOH HOH . G 6 HOH A 6 1007 6 HOH HOH . G 6 HOH A 7 1008 7 HOH HOH . G 6 HOH A 8 1009 8 HOH HOH . G 6 HOH A 9 1010 9 HOH HOH . G 6 HOH A 10 1011 10 HOH HOH . G 6 HOH A 11 1012 11 HOH HOH . G 6 HOH A 12 1013 12 HOH HOH . G 6 HOH A 13 1014 13 HOH HOH . G 6 HOH A 14 1015 14 HOH HOH . G 6 HOH A 15 1016 15 HOH HOH . G 6 HOH A 16 1017 16 HOH HOH . G 6 HOH A 17 1018 17 HOH HOH . G 6 HOH A 18 1019 19 HOH HOH . G 6 HOH A 19 1020 20 HOH HOH . G 6 HOH A 20 1021 21 HOH HOH . G 6 HOH A 21 1022 22 HOH HOH . G 6 HOH A 22 1023 23 HOH HOH . G 6 HOH A 23 1024 24 HOH HOH . G 6 HOH A 24 1025 25 HOH HOH . G 6 HOH A 25 1026 26 HOH HOH . G 6 HOH A 26 1027 27 HOH HOH . G 6 HOH A 27 1028 28 HOH HOH . G 6 HOH A 28 1029 29 HOH HOH . G 6 HOH A 29 1030 30 HOH HOH . G 6 HOH A 30 1031 31 HOH HOH . G 6 HOH A 31 1032 32 HOH HOH . G 6 HOH A 32 1033 33 HOH HOH . G 6 HOH A 33 1034 34 HOH HOH . G 6 HOH A 34 1035 35 HOH HOH . G 6 HOH A 35 1036 36 HOH HOH . G 6 HOH A 36 1037 37 HOH HOH . G 6 HOH A 37 1038 38 HOH HOH . G 6 HOH A 38 1039 39 HOH HOH . G 6 HOH A 39 1040 40 HOH HOH . G 6 HOH A 40 1041 41 HOH HOH . G 6 HOH A 41 1042 42 HOH HOH . G 6 HOH A 42 1043 43 HOH HOH . G 6 HOH A 43 1044 44 HOH HOH . G 6 HOH A 44 1045 45 HOH HOH . G 6 HOH A 45 1046 46 HOH HOH . G 6 HOH A 46 1047 47 HOH HOH . G 6 HOH A 47 1048 48 HOH HOH . G 6 HOH A 48 1049 49 HOH HOH . G 6 HOH A 49 1050 50 HOH HOH . G 6 HOH A 50 1051 51 HOH HOH . G 6 HOH A 51 1052 52 HOH HOH . G 6 HOH A 52 1053 53 HOH HOH . G 6 HOH A 53 1054 54 HOH HOH . G 6 HOH A 54 1055 55 HOH HOH . G 6 HOH A 55 1056 56 HOH HOH . G 6 HOH A 56 1057 57 HOH HOH . G 6 HOH A 57 1058 58 HOH HOH . G 6 HOH A 58 1059 59 HOH HOH . G 6 HOH A 59 1060 60 HOH HOH . G 6 HOH A 60 1061 61 HOH HOH . G 6 HOH A 61 1062 62 HOH HOH . G 6 HOH A 62 1063 63 HOH HOH . G 6 HOH A 63 1064 64 HOH HOH . G 6 HOH A 64 1065 65 HOH HOH . G 6 HOH A 65 1066 66 HOH HOH . G 6 HOH A 66 1067 67 HOH HOH . G 6 HOH A 67 1068 68 HOH HOH . G 6 HOH A 68 1069 69 HOH HOH . G 6 HOH A 69 1070 70 HOH HOH . G 6 HOH A 70 1071 71 HOH HOH . G 6 HOH A 71 1072 72 HOH HOH . G 6 HOH A 72 1073 73 HOH HOH . G 6 HOH A 73 1074 74 HOH HOH . G 6 HOH A 74 1075 75 HOH HOH . G 6 HOH A 75 1076 76 HOH HOH . G 6 HOH A 76 1077 77 HOH HOH . G 6 HOH A 77 1078 78 HOH HOH . G 6 HOH A 78 1079 79 HOH HOH . G 6 HOH A 79 1080 80 HOH HOH . G 6 HOH A 80 1081 81 HOH HOH . G 6 HOH A 81 1082 82 HOH HOH . G 6 HOH A 82 1083 83 HOH HOH . G 6 HOH A 83 1084 84 HOH HOH . G 6 HOH A 84 1085 85 HOH HOH . G 6 HOH A 85 1086 86 HOH HOH . G 6 HOH A 86 1087 87 HOH HOH . G 6 HOH A 87 1088 88 HOH HOH . G 6 HOH A 88 1089 89 HOH HOH . G 6 HOH A 89 1090 90 HOH HOH . G 6 HOH A 90 1091 91 HOH HOH . G 6 HOH A 91 1092 92 HOH HOH . G 6 HOH A 92 1093 93 HOH HOH . G 6 HOH A 93 1094 94 HOH HOH . G 6 HOH A 94 1095 95 HOH HOH . G 6 HOH A 95 1096 96 HOH HOH . G 6 HOH A 96 1097 97 HOH HOH . G 6 HOH A 97 1098 98 HOH HOH . G 6 HOH A 98 1099 99 HOH HOH . G 6 HOH A 99 1100 100 HOH HOH . G 6 HOH A 100 1101 101 HOH HOH . G 6 HOH A 101 1102 102 HOH HOH . G 6 HOH A 102 1103 103 HOH HOH . G 6 HOH A 103 1104 104 HOH HOH . G 6 HOH A 104 1105 105 HOH HOH . G 6 HOH A 105 1106 106 HOH HOH . G 6 HOH A 106 1107 107 HOH HOH . G 6 HOH A 107 1108 108 HOH HOH . G 6 HOH A 108 1109 109 HOH HOH . G 6 HOH A 109 1110 110 HOH HOH . G 6 HOH A 110 1111 111 HOH HOH . G 6 HOH A 111 1112 112 HOH HOH . G 6 HOH A 112 1113 113 HOH HOH . G 6 HOH A 113 1114 114 HOH HOH . G 6 HOH A 114 1115 115 HOH HOH . G 6 HOH A 115 1116 116 HOH HOH . G 6 HOH A 116 1117 117 HOH HOH . G 6 HOH A 117 1118 118 HOH HOH . G 6 HOH A 118 1119 119 HOH HOH . G 6 HOH A 119 1120 120 HOH HOH . G 6 HOH A 120 1121 121 HOH HOH . G 6 HOH A 121 1122 122 HOH HOH . G 6 HOH A 122 1123 123 HOH HOH . G 6 HOH A 123 1124 124 HOH HOH . G 6 HOH A 124 1125 125 HOH HOH . G 6 HOH A 125 1126 126 HOH HOH . G 6 HOH A 126 1127 127 HOH HOH . G 6 HOH A 127 1128 128 HOH HOH . G 6 HOH A 128 1129 129 HOH HOH . G 6 HOH A 129 1130 130 HOH HOH . G 6 HOH A 130 1131 131 HOH HOH . G 6 HOH A 131 1132 132 HOH HOH . G 6 HOH A 132 1133 133 HOH HOH . G 6 HOH A 133 1134 134 HOH HOH . G 6 HOH A 134 1135 135 HOH HOH . G 6 HOH A 135 1136 136 HOH HOH . G 6 HOH A 136 1137 137 HOH HOH . G 6 HOH A 137 1138 138 HOH HOH . G 6 HOH A 138 1139 139 HOH HOH . G 6 HOH A 139 1140 140 HOH HOH . G 6 HOH A 140 1141 141 HOH HOH . G 6 HOH A 141 1142 142 HOH HOH . G 6 HOH A 142 1143 143 HOH HOH . G 6 HOH A 143 1144 144 HOH HOH . G 6 HOH A 144 1145 145 HOH HOH . G 6 HOH A 145 1146 146 HOH HOH . G 6 HOH A 146 1147 147 HOH HOH . G 6 HOH A 147 1148 148 HOH HOH . G 6 HOH A 148 1149 149 HOH HOH . G 6 HOH A 149 1150 150 HOH HOH . G 6 HOH A 150 1151 151 HOH HOH . G 6 HOH A 151 1152 152 HOH HOH . G 6 HOH A 152 1153 153 HOH HOH . G 6 HOH A 153 1154 154 HOH HOH . G 6 HOH A 154 1155 155 HOH HOH . G 6 HOH A 155 1156 156 HOH HOH . G 6 HOH A 156 1157 157 HOH HOH . G 6 HOH A 157 1158 158 HOH HOH . G 6 HOH A 158 1159 159 HOH HOH . G 6 HOH A 159 1160 160 HOH HOH . G 6 HOH A 160 1161 161 HOH HOH . G 6 HOH A 161 1162 162 HOH HOH . G 6 HOH A 162 1163 163 HOH HOH . G 6 HOH A 163 1164 164 HOH HOH . G 6 HOH A 164 1165 165 HOH HOH . G 6 HOH A 165 1166 166 HOH HOH . G 6 HOH A 166 1167 167 HOH HOH . G 6 HOH A 167 1168 168 HOH HOH . G 6 HOH A 168 1169 169 HOH HOH . G 6 HOH A 169 1170 170 HOH HOH . G 6 HOH A 170 1171 171 HOH HOH . G 6 HOH A 171 1172 172 HOH HOH . G 6 HOH A 172 1173 174 HOH HOH . G 6 HOH A 173 1174 175 HOH HOH . G 6 HOH A 174 1175 176 HOH HOH . G 6 HOH A 175 1176 177 HOH HOH . G 6 HOH A 176 1177 178 HOH HOH . G 6 HOH A 177 1178 179 HOH HOH . G 6 HOH A 178 1179 180 HOH HOH . G 6 HOH A 179 1180 181 HOH HOH . G 6 HOH A 180 1181 182 HOH HOH . G 6 HOH A 181 1182 183 HOH HOH . G 6 HOH A 182 1183 184 HOH HOH . G 6 HOH A 183 1184 185 HOH HOH . G 6 HOH A 184 1185 186 HOH HOH . G 6 HOH A 185 1186 187 HOH HOH . G 6 HOH A 186 1187 189 HOH HOH . G 6 HOH A 187 1188 191 HOH HOH . G 6 HOH A 188 1189 192 HOH HOH . G 6 HOH A 189 1190 193 HOH HOH . G 6 HOH A 190 1191 194 HOH HOH . G 6 HOH A 191 1192 195 HOH HOH . G 6 HOH A 192 1193 196 HOH HOH . G 6 HOH A 193 1194 197 HOH HOH . G 6 HOH A 194 1195 198 HOH HOH . G 6 HOH A 195 1196 199 HOH HOH . G 6 HOH A 196 1197 200 HOH HOH . G 6 HOH A 197 1198 201 HOH HOH . G 6 HOH A 198 1199 202 HOH HOH . G 6 HOH A 199 1200 203 HOH HOH . G 6 HOH A 200 1201 204 HOH HOH . G 6 HOH A 201 1202 206 HOH HOH . G 6 HOH A 202 1203 207 HOH HOH . G 6 HOH A 203 1204 208 HOH HOH . G 6 HOH A 204 1205 209 HOH HOH . G 6 HOH A 205 1206 210 HOH HOH . G 6 HOH A 206 1207 211 HOH HOH . G 6 HOH A 207 1208 212 HOH HOH . G 6 HOH A 208 1209 213 HOH HOH . G 6 HOH A 209 1210 214 HOH HOH . G 6 HOH A 210 1211 215 HOH HOH . G 6 HOH A 211 1212 216 HOH HOH . G 6 HOH A 212 1213 217 HOH HOH . G 6 HOH A 213 1214 218 HOH HOH . G 6 HOH A 214 1215 219 HOH HOH . G 6 HOH A 215 1216 220 HOH HOH . G 6 HOH A 216 1217 221 HOH HOH . G 6 HOH A 217 1218 222 HOH HOH . G 6 HOH A 218 1219 224 HOH HOH . G 6 HOH A 219 1220 226 HOH HOH . G 6 HOH A 220 1221 227 HOH HOH . G 6 HOH A 221 1222 228 HOH HOH . G 6 HOH A 222 1223 230 HOH HOH . G 6 HOH A 223 1224 234 HOH HOH . G 6 HOH A 224 1225 237 HOH HOH . G 6 HOH A 225 1226 267 HOH HOH . G 6 HOH A 226 1227 268 HOH HOH . G 6 HOH A 227 1228 269 HOH HOH . G 6 HOH A 228 1229 272 HOH HOH . G 6 HOH A 229 1230 273 HOH HOH . G 6 HOH A 230 1231 274 HOH HOH . G 6 HOH A 231 1232 275 HOH HOH . G 6 HOH A 232 1233 276 HOH HOH . G 6 HOH A 233 1234 309 HOH HOH . G 6 HOH A 234 1235 313 HOH HOH . G 6 HOH A 235 1236 314 HOH HOH . G 6 HOH A 236 1237 315 HOH HOH . G 6 HOH A 237 1238 317 HOH HOH . G 6 HOH A 238 1239 318 HOH HOH . G 6 HOH A 239 1240 319 HOH HOH . G 6 HOH A 240 1241 320 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 5 12.265 -4.812 40.855 1 52.4 ? C1 GOL 1001 A 1 HETATM 2 O O1 GOL . . . E 5 12.555 -5.375 42.117 1 52.67 ? O1 GOL 1001 A 1 HETATM 3 C C2 GOL . . . E 5 10.782 -4.454 40.786 1 52.65 ? C2 GOL 1001 A 1 HETATM 4 O O2 GOL . . . E 5 9.998 -5.528 41.265 1 51.77 ? O2 GOL 1001 A 1 HETATM 5 C C3 GOL . . . E 5 10.386 -4.127 39.351 1 52.47 ? C3 GOL 1001 A 1 HETATM 6 O O3 GOL . . . E 5 9.008 -3.839 39.297 1 51.76 ? O3 GOL 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #