data_2QPY # _model_server_result.job_id 15hTD9OMElYUR_GYMTR2MQ _model_server_result.datetime_utc '2024-11-27 23:59:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qpy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1}' # _entry.id 2QPY # _exptl.entry_id 2QPY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 621.932 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QPY _cell.length_a 53.79 _cell.length_b 66.68 _cell.length_c 72.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QPY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H9 I3 O4' _chem_comp.formula_weight 621.932 _chem_comp.id 4HY _chem_comp.mon_nstd_flag . _chem_comp.name '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 4HY doub 1 n y C1 C11 4HY sing 2 n y C1 C13 4HY sing 3 n n C2 C4 4HY doub 4 n y C2 C12 4HY sing 5 n y C2 O2 4HY sing 6 n n C3 C5 4HY sing 7 n y C3 HC31 4HY sing 8 n n C4 C6 4HY sing 9 n y C4 HC41 4HY sing 10 n n C5 C7 4HY doub 11 n y C5 I1 4HY sing 12 n n C6 C8 4HY doub 13 n y C6 I2 4HY sing 14 n n C7 C9 4HY sing 15 n y C7 O2 4HY sing 16 n n C8 C10 4HY sing 17 n y C8 O1 4HY sing 18 n n C9 C11 4HY doub 19 n y C9 I3 4HY sing 20 n n C10 C12 4HY doub 21 n y C10 H101 4HY sing 22 n n C11 H111 4HY sing 23 n n C12 H121 4HY sing 24 n n C13 C14 4HY sing 25 n n C13 H131 4HY sing 26 n n C13 H132 4HY sing 27 n n C14 O3 4HY doub 28 n n C14 O4 4HY sing 29 n n O1 HO11 4HY sing 30 n n O4 HO41 4HY sing 31 n n # _atom_sites.entry_id 2QPY _atom_sites.fract_transf_matrix[1][1] 0.018591 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DHT A 1 931 931 DHT DHT . D 4 4HY A 1 1 1 4HY 4HY . E 5 HOH A 1 4 4 HOH HOH . E 5 HOH A 2 5 5 HOH HOH . E 5 HOH A 3 6 6 HOH HOH . E 5 HOH A 4 7 7 HOH HOH . E 5 HOH A 5 9 9 HOH HOH . E 5 HOH A 6 10 10 HOH HOH . E 5 HOH A 7 11 11 HOH HOH . E 5 HOH A 8 13 13 HOH HOH . E 5 HOH A 9 14 14 HOH HOH . E 5 HOH A 10 15 15 HOH HOH . E 5 HOH A 11 16 16 HOH HOH . E 5 HOH A 12 19 19 HOH HOH . E 5 HOH A 13 20 20 HOH HOH . E 5 HOH A 14 21 21 HOH HOH . E 5 HOH A 15 22 22 HOH HOH . E 5 HOH A 16 25 25 HOH HOH . E 5 HOH A 17 27 27 HOH HOH . E 5 HOH A 18 28 28 HOH HOH . E 5 HOH A 19 29 29 HOH HOH . E 5 HOH A 20 30 30 HOH HOH . E 5 HOH A 21 31 31 HOH HOH . F 5 HOH B 1 2 2 HOH HOH . F 5 HOH B 2 32 32 HOH HOH . F 5 HOH B 3 33 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4HY . . . D 4 14.074 19.701 28.194 1 75 ? C1 4HY 1 A 1 HETATM 2 C C2 4HY . . . D 4 17.718 16.529 30.285 1 73.4 ? C2 4HY 1 A 1 HETATM 3 C C3 4HY . . . D 4 14.259 19.526 29.627 1 76.19 ? C3 4HY 1 A 1 HETATM 4 C C4 4HY . . . D 4 18.596 17.511 29.861 1 73.01 ? C4 4HY 1 A 1 HETATM 5 C C5 4HY . . . D 4 15.055 18.468 30.097 1 76.9 ? C5 4HY 1 A 1 HETATM 6 C C6 4HY . . . D 4 19.838 17.668 30.435 1 73.39 ? C6 4HY 1 A 1 HETATM 7 C C7 4HY . . . D 4 15.64 17.529 29.216 1 75.86 ? C7 4HY 1 A 1 HETATM 8 C C8 4HY . . . D 4 20.238 16.805 31.508 1 73.14 ? C8 4HY 1 A 1 HETATM 9 C C9 4HY . . . D 4 15.437 17.712 27.81 1 76.3 ? C9 4HY 1 A 1 HETATM 10 C C10 4HY . . . D 4 19.348 15.788 31.957 1 72.76 ? C10 4HY 1 A 1 HETATM 11 C C11 4HY . . . D 4 14.621 18.811 27.313 1 75.99 ? C11 4HY 1 A 1 HETATM 12 C C12 4HY . . . D 4 18.074 15.654 31.345 1 72.03 ? C12 4HY 1 A 1 HETATM 13 C C13 4HY . . . D 4 13.265 20.848 27.684 1 73.54 ? C13 4HY 1 A 1 HETATM 14 C C14 4HY . . . D 4 11.729 20.783 28.013 1 73.1 ? C14 4HY 1 A 1 HETATM 15 I I1 4HY . . . D 4 15.351 18.282 32.182 1 81.42 ? I1 4HY 1 A 1 HETATM 16 I I2 4HY . . . D 4 21.093 19.196 29.724 1 80.91 ? I2 4HY 1 A 1 HETATM 17 I I3 4HY . . . D 4 16.194 16.228 26.482 1 80.79 ? I3 4HY 1 A 1 HETATM 18 O O3 4HY . . . D 4 10.96 20.483 27.06 1 74.14 ? O3 4HY 1 A 1 HETATM 19 O O2 4HY . . . D 4 16.459 16.444 29.64 1 74.97 ? O2 4HY 1 A 1 HETATM 20 O O1 4HY . . . D 4 21.503 16.97 32.087 1 72.52 ? O1 4HY 1 A 1 HETATM 21 O O4 4HY . . . D 4 11.383 21.042 29.199 1 72.45 ? O4 4HY 1 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #