data_2QQH
#
_model_server_result.job_id            HKD3JHrUKYWTfN70Q3092g 
_model_server_result.datetime_utc      '2025-07-31 22:14:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qqh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":500}' 
#
_entry.id    2QQH 
#
_exptl.entry_id    2QQH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2QQH 
_cell.length_a            178.92 
_cell.length_b            178.92 
_cell.length_c            75.009 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QQH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 10 A CYS 110 1_555 A SG CYS 47 A CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc1 A NE2 HIS 86 A HIS 186 1_555 E NI NI . A NI 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc2 A OE2 GLU 88 A GLU 188 1_555 E NI NI . A NI 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc3 A ND1 HIS 170 A HIS 270 1_555 E NI NI . A NI 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? 
metalc ? metalc4 E NI NI . A NI 500 1_555 F O HOH . A HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc5 E NI NI . A NI 500 1_555 F O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2QQH 
_atom_sites.fract_transf_matrix[1][1]    0.005589 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005589 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013332 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 1 1 SO4 SO4 . 
C 2 SO4 A 1 466 2 SO4 SO4 . 
D 2 SO4 A 1 467 3 SO4 SO4 . 
E 3 NI A 1 500 500 NI NI . 
F 4 HOH A 1 501 1 HOH HOH . 
F 4 HOH A 2 502 2 HOH HOH . 
F 4 HOH A 3 503 3 HOH HOH . 
F 4 HOH A 4 504 5 HOH HOH . 
F 4 HOH A 5 505 6 HOH HOH . 
F 4 HOH A 6 506 7 HOH HOH . 
F 4 HOH A 7 507 11 HOH HOH . 
F 4 HOH A 8 508 13 HOH HOH . 
F 4 HOH A 9 509 16 HOH HOH . 
F 4 HOH A 10 510 17 HOH HOH . 
F 4 HOH A 11 511 19 HOH HOH . 
F 4 HOH A 12 512 20 HOH HOH . 
F 4 HOH A 13 513 28 HOH HOH . 
F 4 HOH A 14 514 32 HOH HOH . 
F 4 HOH A 15 515 33 HOH HOH . 
F 4 HOH A 16 516 34 HOH HOH . 
F 4 HOH A 17 517 36 HOH HOH . 
F 4 HOH A 18 518 38 HOH HOH . 
F 4 HOH A 19 519 40 HOH HOH . 
F 4 HOH A 20 520 41 HOH HOH . 
F 4 HOH A 21 521 42 HOH HOH . 
F 4 HOH A 22 522 46 HOH HOH . 
F 4 HOH A 23 523 49 HOH HOH . 
F 4 HOH A 24 524 51 HOH HOH . 
F 4 HOH A 25 525 52 HOH HOH . 
F 4 HOH A 26 526 53 HOH HOH . 
F 4 HOH A 27 527 55 HOH HOH . 
F 4 HOH A 28 528 62 HOH HOH . 
F 4 HOH A 29 529 63 HOH HOH . 
F 4 HOH A 30 530 76 HOH HOH . 
F 4 HOH A 31 531 77 HOH HOH . 
F 4 HOH A 32 532 82 HOH HOH . 
F 4 HOH A 33 533 83 HOH HOH . 
F 4 HOH A 34 534 84 HOH HOH . 
F 4 HOH A 35 535 85 HOH HOH . 
F 4 HOH A 36 536 86 HOH HOH . 
F 4 HOH A 37 537 87 HOH HOH . 
F 4 HOH A 38 538 88 HOH HOH . 
F 4 HOH A 39 539 89 HOH HOH . 
F 4 HOH A 40 540 92 HOH HOH . 
F 4 HOH A 41 541 93 HOH HOH . 
F 4 HOH A 42 542 94 HOH HOH . 
F 4 HOH A 43 543 95 HOH HOH . 
F 4 HOH A 44 544 96 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               82.969 
_atom_site.Cartn_y               59.722 
_atom_site.Cartn_z               38.02 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        36.99 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           500 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#