data_2QQN # _model_server_result.job_id tRmgY1XWyRAMz94B3DrGNQ _model_server_result.datetime_utc '2024-12-26 18:37:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qqn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":215}' # _entry.id 2QQN # _exptl.entry_id 2QQN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QQN _cell.length_a 214.115 _cell.length_b 214.115 _cell.length_c 45.465 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QQN _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 275 1_555 A SG CYS 156 A CYS 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? disulf ? disulf2 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? disulf ? disulf3 B SG CYS 150 H CYS 140 1_555 B SG CYS 206 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 226 H CYS 216 1_555 C SG CYS 214 L CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 C SG CYS 23 L CYS 23 1_555 C SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? disulf ? disulf6 C SG CYS 134 L CYS 134 1_555 C SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 2QQN _atom_sites.fract_transf_matrix[1][1] 0.00467 _atom_sites.fract_transf_matrix[1][2] 0.002696 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021995 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO A 1 3 3 EDO EDO . E 4 EDO H 1 221 2 EDO EDO . F 4 EDO L 1 215 1 EDO EDO . G 5 HOH A 1 1 1 HOH HOH . G 5 HOH A 2 4 4 HOH HOH . G 5 HOH A 3 5 5 HOH HOH . G 5 HOH A 4 7 7 HOH HOH . G 5 HOH A 5 8 8 HOH HOH . G 5 HOH A 6 9 9 HOH HOH . G 5 HOH A 7 10 10 HOH HOH . G 5 HOH A 8 11 11 HOH HOH . G 5 HOH A 9 12 12 HOH HOH . G 5 HOH A 10 16 16 HOH HOH . G 5 HOH A 11 17 17 HOH HOH . G 5 HOH A 12 20 20 HOH HOH . G 5 HOH A 13 22 22 HOH HOH . G 5 HOH A 14 23 23 HOH HOH . G 5 HOH A 15 24 24 HOH HOH . G 5 HOH A 16 25 25 HOH HOH . G 5 HOH A 17 27 27 HOH HOH . G 5 HOH A 18 28 28 HOH HOH . G 5 HOH A 19 33 33 HOH HOH . G 5 HOH A 20 37 37 HOH HOH . G 5 HOH A 21 41 41 HOH HOH . G 5 HOH A 22 43 43 HOH HOH . G 5 HOH A 23 44 44 HOH HOH . G 5 HOH A 24 47 47 HOH HOH . G 5 HOH A 25 50 50 HOH HOH . G 5 HOH A 26 52 52 HOH HOH . G 5 HOH A 27 53 53 HOH HOH . G 5 HOH A 28 56 56 HOH HOH . G 5 HOH A 29 61 61 HOH HOH . G 5 HOH A 30 62 62 HOH HOH . G 5 HOH A 31 63 63 HOH HOH . G 5 HOH A 32 66 66 HOH HOH . G 5 HOH A 33 69 69 HOH HOH . G 5 HOH A 34 70 70 HOH HOH . G 5 HOH A 35 71 71 HOH HOH . G 5 HOH A 36 75 75 HOH HOH . G 5 HOH A 37 82 82 HOH HOH . G 5 HOH A 38 85 85 HOH HOH . G 5 HOH A 39 87 87 HOH HOH . G 5 HOH A 40 88 88 HOH HOH . G 5 HOH A 41 91 91 HOH HOH . G 5 HOH A 42 93 93 HOH HOH . G 5 HOH A 43 94 94 HOH HOH . G 5 HOH A 44 97 97 HOH HOH . G 5 HOH A 45 99 99 HOH HOH . G 5 HOH A 46 102 102 HOH HOH . G 5 HOH A 47 104 104 HOH HOH . G 5 HOH A 48 106 106 HOH HOH . G 5 HOH A 49 107 107 HOH HOH . G 5 HOH A 50 111 111 HOH HOH . G 5 HOH A 51 115 115 HOH HOH . G 5 HOH A 52 118 118 HOH HOH . G 5 HOH A 53 119 119 HOH HOH . G 5 HOH A 54 127 127 HOH HOH . G 5 HOH A 55 128 128 HOH HOH . G 5 HOH A 56 144 144 HOH HOH . G 5 HOH A 57 145 145 HOH HOH . G 5 HOH A 58 147 147 HOH HOH . G 5 HOH A 59 150 150 HOH HOH . G 5 HOH A 60 151 151 HOH HOH . G 5 HOH A 61 157 157 HOH HOH . G 5 HOH A 62 159 159 HOH HOH . G 5 HOH A 63 162 162 HOH HOH . G 5 HOH A 64 166 166 HOH HOH . G 5 HOH A 65 207 207 HOH HOH . G 5 HOH A 66 208 208 HOH HOH . G 5 HOH A 67 209 209 HOH HOH . G 5 HOH A 68 210 210 HOH HOH . G 5 HOH A 69 211 211 HOH HOH . G 5 HOH A 70 212 212 HOH HOH . G 5 HOH A 71 213 213 HOH HOH . G 5 HOH A 72 216 216 HOH HOH . G 5 HOH A 73 217 217 HOH HOH . G 5 HOH A 74 218 218 HOH HOH . G 5 HOH A 75 219 219 HOH HOH . G 5 HOH A 76 220 220 HOH HOH . G 5 HOH A 77 221 221 HOH HOH . G 5 HOH A 78 222 222 HOH HOH . G 5 HOH A 79 223 223 HOH HOH . G 5 HOH A 80 233 233 HOH HOH . G 5 HOH A 81 235 235 HOH HOH . G 5 HOH A 82 236 236 HOH HOH . G 5 HOH A 83 237 237 HOH HOH . G 5 HOH A 84 238 238 HOH HOH . G 5 HOH A 85 239 239 HOH HOH . G 5 HOH A 86 240 240 HOH HOH . G 5 HOH A 87 241 241 HOH HOH . G 5 HOH A 88 242 242 HOH HOH . H 5 HOH H 1 222 19 HOH HOH . H 5 HOH H 2 223 21 HOH HOH . H 5 HOH H 3 224 29 HOH HOH . H 5 HOH H 4 225 35 HOH HOH . H 5 HOH H 5 226 36 HOH HOH . H 5 HOH H 6 227 39 HOH HOH . H 5 HOH H 7 228 40 HOH HOH . H 5 HOH H 8 229 42 HOH HOH . H 5 HOH H 9 230 51 HOH HOH . H 5 HOH H 10 231 60 HOH HOH . H 5 HOH H 11 232 65 HOH HOH . H 5 HOH H 12 233 67 HOH HOH . H 5 HOH H 13 234 74 HOH HOH . H 5 HOH H 14 235 76 HOH HOH . H 5 HOH H 15 236 77 HOH HOH . H 5 HOH H 16 237 78 HOH HOH . H 5 HOH H 17 238 80 HOH HOH . H 5 HOH H 18 239 81 HOH HOH . H 5 HOH H 19 240 86 HOH HOH . H 5 HOH H 20 241 89 HOH HOH . H 5 HOH H 21 242 92 HOH HOH . H 5 HOH H 22 243 95 HOH HOH . H 5 HOH H 23 244 100 HOH HOH . H 5 HOH H 24 245 103 HOH HOH . H 5 HOH H 25 246 105 HOH HOH . H 5 HOH H 26 247 110 HOH HOH . H 5 HOH H 27 248 113 HOH HOH . H 5 HOH H 28 249 114 HOH HOH . H 5 HOH H 29 250 121 HOH HOH . H 5 HOH H 30 251 129 HOH HOH . H 5 HOH H 31 252 130 HOH HOH . H 5 HOH H 32 253 131 HOH HOH . H 5 HOH H 33 254 132 HOH HOH . H 5 HOH H 34 255 133 HOH HOH . H 5 HOH H 35 256 134 HOH HOH . H 5 HOH H 36 257 136 HOH HOH . H 5 HOH H 37 258 137 HOH HOH . H 5 HOH H 38 259 138 HOH HOH . H 5 HOH H 39 260 140 HOH HOH . H 5 HOH H 40 261 142 HOH HOH . H 5 HOH H 41 262 143 HOH HOH . H 5 HOH H 42 263 146 HOH HOH . H 5 HOH H 43 264 149 HOH HOH . H 5 HOH H 44 265 152 HOH HOH . H 5 HOH H 45 266 154 HOH HOH . H 5 HOH H 46 267 155 HOH HOH . H 5 HOH H 47 268 158 HOH HOH . H 5 HOH H 48 269 160 HOH HOH . H 5 HOH H 49 270 182 HOH HOH . H 5 HOH H 50 271 188 HOH HOH . H 5 HOH H 51 272 189 HOH HOH . H 5 HOH H 52 273 190 HOH HOH . H 5 HOH H 53 274 191 HOH HOH . H 5 HOH H 54 275 192 HOH HOH . H 5 HOH H 55 276 195 HOH HOH . H 5 HOH H 56 277 196 HOH HOH . H 5 HOH H 57 278 197 HOH HOH . H 5 HOH H 58 279 198 HOH HOH . H 5 HOH H 59 280 199 HOH HOH . H 5 HOH H 60 281 200 HOH HOH . H 5 HOH H 61 282 201 HOH HOH . H 5 HOH H 62 283 202 HOH HOH . H 5 HOH H 63 284 203 HOH HOH . H 5 HOH H 64 285 204 HOH HOH . H 5 HOH H 65 286 206 HOH HOH . H 5 HOH H 66 287 214 HOH HOH . H 5 HOH H 67 288 224 HOH HOH . H 5 HOH H 68 289 225 HOH HOH . H 5 HOH H 69 290 226 HOH HOH . H 5 HOH H 70 291 227 HOH HOH . H 5 HOH H 71 292 229 HOH HOH . H 5 HOH H 72 293 232 HOH HOH . H 5 HOH H 73 294 243 HOH HOH . H 5 HOH H 74 295 244 HOH HOH . H 5 HOH H 75 296 249 HOH HOH . I 5 HOH L 1 216 2 HOH HOH . I 5 HOH L 2 217 3 HOH HOH . I 5 HOH L 3 218 6 HOH HOH . I 5 HOH L 4 219 13 HOH HOH . I 5 HOH L 5 220 14 HOH HOH . I 5 HOH L 6 221 15 HOH HOH . I 5 HOH L 7 222 18 HOH HOH . I 5 HOH L 8 223 26 HOH HOH . I 5 HOH L 9 224 30 HOH HOH . I 5 HOH L 10 225 31 HOH HOH . I 5 HOH L 11 226 32 HOH HOH . I 5 HOH L 12 227 34 HOH HOH . I 5 HOH L 13 228 38 HOH HOH . I 5 HOH L 14 229 45 HOH HOH . I 5 HOH L 15 230 46 HOH HOH . I 5 HOH L 16 231 48 HOH HOH . I 5 HOH L 17 232 49 HOH HOH . I 5 HOH L 18 233 54 HOH HOH . I 5 HOH L 19 234 55 HOH HOH . I 5 HOH L 20 235 57 HOH HOH . I 5 HOH L 21 236 58 HOH HOH . I 5 HOH L 22 237 59 HOH HOH . I 5 HOH L 23 238 64 HOH HOH . I 5 HOH L 24 239 68 HOH HOH . I 5 HOH L 25 240 72 HOH HOH . I 5 HOH L 26 241 73 HOH HOH . I 5 HOH L 27 242 79 HOH HOH . I 5 HOH L 28 243 83 HOH HOH . I 5 HOH L 29 244 84 HOH HOH . I 5 HOH L 30 245 90 HOH HOH . I 5 HOH L 31 246 96 HOH HOH . I 5 HOH L 32 247 98 HOH HOH . I 5 HOH L 33 248 101 HOH HOH . I 5 HOH L 34 249 108 HOH HOH . I 5 HOH L 35 250 109 HOH HOH . I 5 HOH L 36 251 112 HOH HOH . I 5 HOH L 37 252 116 HOH HOH . I 5 HOH L 38 253 117 HOH HOH . I 5 HOH L 39 254 120 HOH HOH . I 5 HOH L 40 255 122 HOH HOH . I 5 HOH L 41 256 123 HOH HOH . I 5 HOH L 42 257 124 HOH HOH . I 5 HOH L 43 258 125 HOH HOH . I 5 HOH L 44 259 126 HOH HOH . I 5 HOH L 45 260 135 HOH HOH . I 5 HOH L 46 261 139 HOH HOH . I 5 HOH L 47 262 141 HOH HOH . I 5 HOH L 48 263 148 HOH HOH . I 5 HOH L 49 264 153 HOH HOH . I 5 HOH L 50 265 156 HOH HOH . I 5 HOH L 51 266 161 HOH HOH . I 5 HOH L 52 267 163 HOH HOH . I 5 HOH L 53 268 164 HOH HOH . I 5 HOH L 54 269 165 HOH HOH . I 5 HOH L 55 270 167 HOH HOH . I 5 HOH L 56 271 168 HOH HOH . I 5 HOH L 57 272 169 HOH HOH . I 5 HOH L 58 273 170 HOH HOH . I 5 HOH L 59 274 171 HOH HOH . I 5 HOH L 60 275 172 HOH HOH . I 5 HOH L 61 276 173 HOH HOH . I 5 HOH L 62 277 174 HOH HOH . I 5 HOH L 63 278 175 HOH HOH . I 5 HOH L 64 279 176 HOH HOH . I 5 HOH L 65 280 177 HOH HOH . I 5 HOH L 66 281 178 HOH HOH . I 5 HOH L 67 282 179 HOH HOH . I 5 HOH L 68 283 180 HOH HOH . I 5 HOH L 69 284 181 HOH HOH . I 5 HOH L 70 285 183 HOH HOH . I 5 HOH L 71 286 184 HOH HOH . I 5 HOH L 72 287 185 HOH HOH . I 5 HOH L 73 288 186 HOH HOH . I 5 HOH L 74 289 187 HOH HOH . I 5 HOH L 75 290 193 HOH HOH . I 5 HOH L 76 291 194 HOH HOH . I 5 HOH L 77 292 205 HOH HOH . I 5 HOH L 78 293 215 HOH HOH . I 5 HOH L 79 294 228 HOH HOH . I 5 HOH L 80 295 230 HOH HOH . I 5 HOH L 81 296 231 HOH HOH . I 5 HOH L 82 297 234 HOH HOH . I 5 HOH L 83 298 245 HOH HOH . I 5 HOH L 84 299 246 HOH HOH . I 5 HOH L 85 300 247 HOH HOH . I 5 HOH L 86 301 248 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 -55.876 6.296 29.871 1 67.23 ? C1 EDO 215 L 1 HETATM 2 O O1 EDO . . . F 4 -56.904 7.299 29.911 1 67.98 ? O1 EDO 215 L 1 HETATM 3 C C2 EDO . . . F 4 -54.676 6.65 30.752 1 65.82 ? C2 EDO 215 L 1 HETATM 4 O O2 EDO . . . F 4 -53.811 5.505 30.888 1 65.39 ? O2 EDO 215 L 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #