data_2QRC
#
_model_server_result.job_id            2RSpAP2kUoIxS6yEtNjxRA 
_model_server_result.datetime_utc      '2024-11-12 23:05:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qrc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1001}' 
#
_entry.id    2QRC 
#
_exptl.entry_id    2QRC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          124.13 
_cell.angle_gamma         90 
_cell.entry_id            2QRC 
_cell.length_a            168.293 
_cell.length_b            78.087 
_cell.length_c            108.553 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QRC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
PISA hexameric 6 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,H,K,L,M 1 1 
D,E,F,I,J,N,O,P 2 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 57 n n 
P O2P AMP sing 58 n n 
P O3P AMP sing 59 n n 
P O5' AMP sing 60 n n 
O2P HOP2 AMP sing 61 n n 
O3P HOP3 AMP sing 62 n n 
O5' C5' AMP sing 63 n n 
C5' C4' AMP sing 64 n n 
C5' "H5'1" AMP sing 65 n n 
C5' "H5'2" AMP sing 66 n n 
C4' O4' AMP sing 67 n n 
C4' C3' AMP sing 68 n n 
C4' H4' AMP sing 69 n n 
O4' C1' AMP sing 70 n n 
C3' O3' AMP sing 71 n n 
C3' C2' AMP sing 72 n n 
C3' H3' AMP sing 73 n n 
O3' HO3' AMP sing 74 n n 
C2' O2' AMP sing 75 n n 
C2' C1' AMP sing 76 n n 
C2' H2' AMP sing 77 n n 
O2' HO2' AMP sing 78 n n 
C1' N9 AMP sing 79 n n 
C1' H1' AMP sing 80 n n 
N9 C8 AMP sing 81 n y 
N9 C4 AMP sing 82 n y 
C8 N7 AMP doub 83 n y 
C8 H8 AMP sing 84 n n 
N7 C5 AMP sing 85 n y 
C5 C6 AMP sing 86 n y 
C5 C4 AMP doub 87 n y 
C6 N6 AMP sing 88 n n 
C6 N1 AMP doub 89 n y 
N6 HN61 AMP sing 90 n n 
N6 HN62 AMP sing 91 n n 
N1 C2 AMP sing 92 n y 
C2 N3 AMP doub 93 n y 
C2 H2 AMP sing 94 n n 
N3 C4 AMP sing 95 n y 
#
_atom_sites.entry_id                     2QRC 
_atom_sites.fract_transf_matrix[1][1]    0.005942 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004028 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012806 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011129 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 AMP G 1 1001 1001 AMP AMP . 
H 5 ADP G 1 1003 1003 ADP ADP . 
I 5 ADP E 1 1002 1002 ADP ADP . 
J 5 ADP E 1 1004 1004 ADP ADP . 
K 6 HOH A 1 5 5 HOH HOH . 
K 6 HOH A 2 9 9 HOH HOH . 
K 6 HOH A 3 18 18 HOH HOH . 
K 6 HOH A 4 27 27 HOH HOH . 
K 6 HOH A 5 34 34 HOH HOH . 
K 6 HOH A 6 36 36 HOH HOH . 
K 6 HOH A 7 39 39 HOH HOH . 
K 6 HOH A 8 63 63 HOH HOH . 
L 6 HOH B 1 17 17 HOH HOH . 
L 6 HOH B 2 21 21 HOH HOH . 
L 6 HOH B 3 32 32 HOH HOH . 
L 6 HOH B 4 38 38 HOH HOH . 
L 6 HOH B 5 46 46 HOH HOH . 
L 6 HOH B 6 54 54 HOH HOH . 
L 6 HOH B 7 60 60 HOH HOH . 
L 6 HOH B 8 64 64 HOH HOH . 
L 6 HOH B 9 71 71 HOH HOH . 
L 6 HOH B 10 75 75 HOH HOH . 
M 6 HOH G 1 1004 1004 HOH HOH . 
M 6 HOH G 2 1005 1005 HOH HOH . 
M 6 HOH G 3 1006 1006 HOH HOH . 
M 6 HOH G 4 1007 1007 HOH HOH . 
M 6 HOH G 5 1008 1008 HOH HOH . 
M 6 HOH G 6 1009 1009 HOH HOH . 
M 6 HOH G 7 1010 1010 HOH HOH . 
M 6 HOH G 8 1011 1011 HOH HOH . 
M 6 HOH G 9 1012 1012 HOH HOH . 
M 6 HOH G 10 1013 1013 HOH HOH . 
M 6 HOH G 11 1014 1014 HOH HOH . 
M 6 HOH G 12 1015 1015 HOH HOH . 
M 6 HOH G 13 1016 1016 HOH HOH . 
M 6 HOH G 14 1017 1017 HOH HOH . 
M 6 HOH G 15 1018 1018 HOH HOH . 
M 6 HOH G 16 1019 1019 HOH HOH . 
M 6 HOH G 17 1020 1020 HOH HOH . 
M 6 HOH G 18 1021 1021 HOH HOH . 
M 6 HOH G 19 1022 1022 HOH HOH . 
N 6 HOH C 1 2 2 HOH HOH . 
N 6 HOH C 2 4 4 HOH HOH . 
N 6 HOH C 3 13 13 HOH HOH . 
N 6 HOH C 4 26 26 HOH HOH . 
N 6 HOH C 5 33 33 HOH HOH . 
N 6 HOH C 6 41 41 HOH HOH . 
N 6 HOH C 7 44 44 HOH HOH . 
N 6 HOH C 8 51 51 HOH HOH . 
N 6 HOH C 9 56 56 HOH HOH . 
N 6 HOH C 10 58 58 HOH HOH . 
N 6 HOH C 11 66 66 HOH HOH . 
O 6 HOH D 1 1 1 HOH HOH . 
O 6 HOH D 2 14 14 HOH HOH . 
O 6 HOH D 3 23 23 HOH HOH . 
O 6 HOH D 4 37 37 HOH HOH . 
O 6 HOH D 5 47 47 HOH HOH . 
O 6 HOH D 6 48 48 HOH HOH . 
O 6 HOH D 7 53 53 HOH HOH . 
O 6 HOH D 8 72 72 HOH HOH . 
O 6 HOH D 9 73 73 HOH HOH . 
O 6 HOH D 10 74 74 HOH HOH . 
O 6 HOH D 11 78 78 HOH HOH . 
P 6 HOH E 1 1005 1005 HOH HOH . 
P 6 HOH E 2 1006 1006 HOH HOH . 
P 6 HOH E 3 1007 1007 HOH HOH . 
P 6 HOH E 4 1008 1008 HOH HOH . 
P 6 HOH E 5 1009 1009 HOH HOH . 
P 6 HOH E 6 1010 1010 HOH HOH . 
P 6 HOH E 7 1011 1011 HOH HOH . 
P 6 HOH E 8 1012 1012 HOH HOH . 
P 6 HOH E 9 1013 1013 HOH HOH . 
P 6 HOH E 10 1014 1014 HOH HOH . 
P 6 HOH E 11 1015 1015 HOH HOH . 
P 6 HOH E 12 1016 1016 HOH HOH . 
P 6 HOH E 13 1017 1017 HOH HOH . 
P 6 HOH E 14 1018 1018 HOH HOH . 
P 6 HOH E 15 1019 1019 HOH HOH . 
P 6 HOH E 16 1020 1020 HOH HOH . 
P 6 HOH E 17 1021 1021 HOH HOH . 
P 6 HOH E 18 1022 1022 HOH HOH . 
P 6 HOH E 19 1023 1023 HOH HOH . 
P 6 HOH E 20 1024 1024 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . G 4 -1.921 -20.046 27.556 1 46.14 ? P AMP 1001 G 1 
HETATM 2 O O1P AMP . . . G 4 -1.482 -19.575 28.948 1 41.71 ? O1P AMP 1001 G 1 
HETATM 3 O O2P AMP . . . G 4 -1.083 -19.628 26.366 1 47.77 ? O2P AMP 1001 G 1 
HETATM 4 O O3P AMP . . . G 4 -3.391 -19.893 27.273 1 45.51 ? O3P AMP 1001 G 1 
HETATM 5 O O5' AMP . . . G 4 -1.593 -21.602 27.466 1 44.37 ? O5' AMP 1001 G 1 
HETATM 6 C C5' AMP . . . G 4 -1.426 -22.24 26.207 1 44.98 ? C5' AMP 1001 G 1 
HETATM 7 C C4' AMP . . . G 4 -1.626 -23.759 26.353 1 45.66 ? C4' AMP 1001 G 1 
HETATM 8 O O4' AMP . . . G 4 -0.456 -24.375 26.867 1 46.92 ? O4' AMP 1001 G 1 
HETATM 9 C C3' AMP . . . G 4 -2.711 -24.157 27.339 1 46.6 ? C3' AMP 1001 G 1 
HETATM 10 O O3' AMP . . . G 4 -3.21 -25.414 26.9 1 48.51 ? O3' AMP 1001 G 1 
HETATM 11 C C2' AMP . . . G 4 -2.019 -24.4 28.659 1 46.79 ? C2' AMP 1001 G 1 
HETATM 12 O O2' AMP . . . G 4 -2.628 -25.458 29.403 1 48.04 ? O2' AMP 1001 G 1 
HETATM 13 C C1' AMP . . . G 4 -0.63 -24.817 28.238 1 47.52 ? C1' AMP 1001 G 1 
HETATM 14 N N9 AMP . . . G 4 0.382 -24.243 29.179 1 48.04 ? N9 AMP 1001 G 1 
HETATM 15 C C8 AMP . . . G 4 0.322 -23.027 29.75 1 48.01 ? C8 AMP 1001 G 1 
HETATM 16 N N7 AMP . . . G 4 1.405 -22.808 30.54 1 49.32 ? N7 AMP 1001 G 1 
HETATM 17 C C5 AMP . . . G 4 2.182 -23.902 30.5 1 48.23 ? C5 AMP 1001 G 1 
HETATM 18 C C6 AMP . . . G 4 3.461 -24.327 31.119 1 48.4 ? C6 AMP 1001 G 1 
HETATM 19 N N6 AMP . . . G 4 4.144 -23.52 31.971 1 47.98 ? N6 AMP 1001 G 1 
HETATM 20 N N1 AMP . . . G 4 3.922 -25.554 30.799 1 47.75 ? N1 AMP 1001 G 1 
HETATM 21 C C2 AMP . . . G 4 3.263 -26.373 29.967 1 47.7 ? C2 AMP 1001 G 1 
HETATM 22 N N3 AMP . . . G 4 2.097 -26.051 29.385 1 48.3 ? N3 AMP 1001 G 1 
HETATM 23 C C4 AMP . . . G 4 1.508 -24.847 29.602 1 48.01 ? C4 AMP 1001 G 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           23 
#