data_2QSK # _model_server_result.job_id Ozcd2Xgvvfcxwuz5n-aQJg _model_server_result.datetime_utc '2024-10-10 06:28:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":99}' # _entry.id 2QSK # _exptl.entry_id 2QSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QSK _cell.length_a 38.2 _cell.length_b 38.79 _cell.length_c 59.87 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 55 A CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 20 A CYS 20 1_555 A SG CYS 32 A CYS 32 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 A SG CYS 26 A CYS 26 1_555 A SG CYS 38 A CYS 38 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 A SG CYS 68 A CYS 68 1_555 A SG CYS 80 A CYS 80 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.068 ? disulf ? disulf5 A SG CYS 74 A CYS 74 1_555 A SG CYS 86 A CYS 86 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.113 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2QSK _atom_sites.fract_transf_matrix[1][1] 0.026178 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016703 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 96 1 CL CL . C 2 CL A 1 97 2 CL CL . D 2 CL A 1 98 3 CL CL . E 3 GOL A 1 99 4 GOL GOL . F 4 HOH A 1 100 1 HOH HOH . F 4 HOH A 2 101 2 HOH HOH . F 4 HOH A 3 102 3 HOH HOH . F 4 HOH A 4 103 4 HOH HOH . F 4 HOH A 5 104 5 HOH HOH . F 4 HOH A 6 105 6 HOH HOH . F 4 HOH A 7 106 7 HOH HOH . F 4 HOH A 8 107 8 HOH HOH . F 4 HOH A 9 108 9 HOH HOH . F 4 HOH A 10 109 10 HOH HOH . F 4 HOH A 11 110 11 HOH HOH . F 4 HOH A 12 111 12 HOH HOH . F 4 HOH A 13 112 13 HOH HOH . F 4 HOH A 14 113 14 HOH HOH . F 4 HOH A 15 114 15 HOH HOH . F 4 HOH A 16 115 16 HOH HOH . F 4 HOH A 17 116 17 HOH HOH . F 4 HOH A 18 117 18 HOH HOH . F 4 HOH A 19 118 19 HOH HOH . F 4 HOH A 20 119 20 HOH HOH . F 4 HOH A 21 120 21 HOH HOH . F 4 HOH A 22 121 22 HOH HOH . F 4 HOH A 23 122 23 HOH HOH . F 4 HOH A 24 123 24 HOH HOH . F 4 HOH A 25 124 25 HOH HOH . F 4 HOH A 26 125 26 HOH HOH . F 4 HOH A 27 126 27 HOH HOH . F 4 HOH A 28 127 28 HOH HOH . F 4 HOH A 29 128 29 HOH HOH . F 4 HOH A 30 129 30 HOH HOH . F 4 HOH A 31 130 31 HOH HOH . F 4 HOH A 32 131 32 HOH HOH . F 4 HOH A 33 132 33 HOH HOH . F 4 HOH A 34 133 34 HOH HOH . F 4 HOH A 35 134 35 HOH HOH . F 4 HOH A 36 135 36 HOH HOH . F 4 HOH A 37 136 37 HOH HOH . F 4 HOH A 38 137 38 HOH HOH . F 4 HOH A 39 138 39 HOH HOH . F 4 HOH A 40 139 40 HOH HOH . F 4 HOH A 41 140 41 HOH HOH . F 4 HOH A 42 141 42 HOH HOH . F 4 HOH A 43 142 43 HOH HOH . F 4 HOH A 44 143 44 HOH HOH . F 4 HOH A 45 144 45 HOH HOH . F 4 HOH A 46 145 46 HOH HOH . F 4 HOH A 47 146 47 HOH HOH . F 4 HOH A 48 147 48 HOH HOH . F 4 HOH A 49 148 49 HOH HOH . F 4 HOH A 50 149 50 HOH HOH . F 4 HOH A 51 150 51 HOH HOH . F 4 HOH A 52 151 52 HOH HOH . F 4 HOH A 53 152 53 HOH HOH . F 4 HOH A 54 153 54 HOH HOH . F 4 HOH A 55 154 55 HOH HOH . F 4 HOH A 56 155 56 HOH HOH . F 4 HOH A 57 156 57 HOH HOH . F 4 HOH A 58 157 58 HOH HOH . F 4 HOH A 59 158 59 HOH HOH . F 4 HOH A 60 159 60 HOH HOH . F 4 HOH A 61 160 61 HOH HOH . F 4 HOH A 62 161 62 HOH HOH . F 4 HOH A 63 162 63 HOH HOH . F 4 HOH A 64 163 64 HOH HOH . F 4 HOH A 65 164 65 HOH HOH . F 4 HOH A 66 165 66 HOH HOH . F 4 HOH A 67 166 67 HOH HOH . F 4 HOH A 68 167 68 HOH HOH . F 4 HOH A 69 168 69 HOH HOH . F 4 HOH A 70 169 70 HOH HOH . F 4 HOH A 71 170 72 HOH HOH . F 4 HOH A 72 171 73 HOH HOH . F 4 HOH A 73 172 74 HOH HOH . F 4 HOH A 74 173 75 HOH HOH . F 4 HOH A 75 174 76 HOH HOH . F 4 HOH A 76 175 77 HOH HOH . F 4 HOH A 77 176 78 HOH HOH . F 4 HOH A 78 177 80 HOH HOH . F 4 HOH A 79 178 81 HOH HOH . F 4 HOH A 80 179 82 HOH HOH . F 4 HOH A 81 180 83 HOH HOH . F 4 HOH A 82 181 84 HOH HOH . F 4 HOH A 83 182 85 HOH HOH . F 4 HOH A 84 183 87 HOH HOH . F 4 HOH A 85 184 88 HOH HOH . F 4 HOH A 86 185 89 HOH HOH . F 4 HOH A 87 186 90 HOH HOH . F 4 HOH A 88 187 91 HOH HOH . F 4 HOH A 89 188 92 HOH HOH . F 4 HOH A 90 189 94 HOH HOH . F 4 HOH A 91 190 96 HOH HOH . F 4 HOH A 92 191 97 HOH HOH . F 4 HOH A 93 192 98 HOH HOH . F 4 HOH A 94 193 99 HOH HOH . F 4 HOH A 95 194 100 HOH HOH . F 4 HOH A 96 195 101 HOH HOH . F 4 HOH A 97 196 102 HOH HOH . F 4 HOH A 98 197 104 HOH HOH . F 4 HOH A 99 198 105 HOH HOH . F 4 HOH A 100 199 106 HOH HOH . F 4 HOH A 101 200 107 HOH HOH . F 4 HOH A 102 201 108 HOH HOH . F 4 HOH A 103 202 110 HOH HOH . F 4 HOH A 104 203 111 HOH HOH . F 4 HOH A 105 204 112 HOH HOH . F 4 HOH A 106 205 114 HOH HOH . F 4 HOH A 107 206 115 HOH HOH . F 4 HOH A 108 207 116 HOH HOH . F 4 HOH A 109 208 118 HOH HOH . F 4 HOH A 110 209 120 HOH HOH . F 4 HOH A 111 210 127 HOH HOH . F 4 HOH A 112 211 128 HOH HOH . F 4 HOH A 113 212 130 HOH HOH . F 4 HOH A 114 213 139 HOH HOH . F 4 HOH A 115 214 140 HOH HOH . F 4 HOH A 116 215 141 HOH HOH . F 4 HOH A 117 216 142 HOH HOH . F 4 HOH A 118 217 145 HOH HOH . F 4 HOH A 119 218 156 HOH HOH . F 4 HOH A 120 219 163 HOH HOH . F 4 HOH A 121 220 165 HOH HOH . F 4 HOH A 122 221 166 HOH HOH . F 4 HOH A 123 222 167 HOH HOH . F 4 HOH A 124 223 168 HOH HOH . F 4 HOH A 125 224 170 HOH HOH . F 4 HOH A 126 225 180 HOH HOH . F 4 HOH A 127 226 182 HOH HOH . F 4 HOH A 128 227 183 HOH HOH . F 4 HOH A 129 228 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 17.38 5.189 -5.018 1 18.51 ? C1 GOL 99 A 1 HETATM 2 O O1 GOL . . . E 3 17.572 4.539 -3.754 1 16.61 ? O1 GOL 99 A 1 HETATM 3 C C2 GOL . . . E 3 16.744 6.573 -4.853 1 21.41 ? C2 GOL 99 A 1 HETATM 4 O O2 GOL . . . E 3 17.463 7.32 -3.895 1 23.74 ? O2 GOL 99 A 1 HETATM 5 C C3 GOL . . . E 3 16.724 7.299 -6.196 1 24.06 ? C3 GOL 99 A 1 HETATM 6 O O3 GOL . . . E 3 16.299 8.648 -6.073 1 26.47 ? O3 GOL 99 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #