data_2QTD # _model_server_result.job_id GfOJlsF46-dS0tAmJy6QPg _model_server_result.datetime_utc '2024-12-21 14:20:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qtd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":108}' # _entry.id 2QTD # _exptl.entry_id 2QTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QTD _cell.length_a 35.86 _cell.length_b 54.12 _cell.length_c 56.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 2 A MSE 1 1_555 A N ILE 3 A ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C ASN 4 A ASN 3 1_555 A N MSE 5 A MSE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale3 A C MSE 5 A MSE 4 1_555 A N LYS 6 A LYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C SER 10 A SER 9 1_555 A N MSE 11 A MSE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C MSE 11 A MSE 10 1_555 A N ASP 12 A ASP 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 218 n n O1 HO1 PG4 sing 219 n n C1 C2 PG4 sing 220 n n C1 H11 PG4 sing 221 n n C1 H12 PG4 sing 222 n n C2 O2 PG4 sing 223 n n C2 H21 PG4 sing 224 n n C2 H22 PG4 sing 225 n n O2 C3 PG4 sing 226 n n C3 C4 PG4 sing 227 n n C3 H31 PG4 sing 228 n n C3 H32 PG4 sing 229 n n C4 O3 PG4 sing 230 n n C4 H41 PG4 sing 231 n n C4 H42 PG4 sing 232 n n O3 C5 PG4 sing 233 n n C5 C6 PG4 sing 234 n n C5 H51 PG4 sing 235 n n C5 H52 PG4 sing 236 n n C6 O4 PG4 sing 237 n n C6 H61 PG4 sing 238 n n C6 H62 PG4 sing 239 n n O4 C7 PG4 sing 240 n n C7 C8 PG4 sing 241 n n C7 H71 PG4 sing 242 n n C7 H72 PG4 sing 243 n n C8 O5 PG4 sing 244 n n C8 H81 PG4 sing 245 n n C8 H82 PG4 sing 246 n n O5 HO5 PG4 sing 247 n n # _atom_sites.entry_id 2QTD _atom_sites.fract_transf_matrix[1][1] 0.027886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018477 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01769 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 105 1 TRS TRS . C 3 PG4 A 1 106 2 PG4 PG4 . D 3 PG4 A 1 107 3 PG4 PG4 . E 3 PG4 A 1 108 4 PG4 PG4 . F 3 PG4 A 1 109 5 PG4 PG4 . G 3 PG4 A 1 110 6 PG4 PG4 . H 3 PG4 A 1 111 7 PG4 PG4 . I 3 PG4 A 1 112 8 PG4 PG4 . J 4 HOH A 1 113 9 HOH HOH . J 4 HOH A 2 114 10 HOH HOH . J 4 HOH A 3 115 11 HOH HOH . J 4 HOH A 4 116 12 HOH HOH . J 4 HOH A 5 117 13 HOH HOH . J 4 HOH A 6 118 14 HOH HOH . J 4 HOH A 7 119 15 HOH HOH . J 4 HOH A 8 120 16 HOH HOH . J 4 HOH A 9 121 17 HOH HOH . J 4 HOH A 10 122 18 HOH HOH . J 4 HOH A 11 123 19 HOH HOH . J 4 HOH A 12 124 20 HOH HOH . J 4 HOH A 13 125 21 HOH HOH . J 4 HOH A 14 126 22 HOH HOH . J 4 HOH A 15 127 23 HOH HOH . J 4 HOH A 16 128 24 HOH HOH . J 4 HOH A 17 129 25 HOH HOH . J 4 HOH A 18 130 26 HOH HOH . J 4 HOH A 19 131 27 HOH HOH . J 4 HOH A 20 132 28 HOH HOH . J 4 HOH A 21 133 29 HOH HOH . J 4 HOH A 22 134 30 HOH HOH . J 4 HOH A 23 135 31 HOH HOH . J 4 HOH A 24 136 32 HOH HOH . J 4 HOH A 25 137 33 HOH HOH . J 4 HOH A 26 138 34 HOH HOH . J 4 HOH A 27 139 35 HOH HOH . J 4 HOH A 28 140 36 HOH HOH . J 4 HOH A 29 141 37 HOH HOH . J 4 HOH A 30 142 38 HOH HOH . J 4 HOH A 31 143 39 HOH HOH . J 4 HOH A 32 144 40 HOH HOH . J 4 HOH A 33 145 41 HOH HOH . J 4 HOH A 34 146 42 HOH HOH . J 4 HOH A 35 147 43 HOH HOH . J 4 HOH A 36 148 44 HOH HOH . J 4 HOH A 37 149 45 HOH HOH . J 4 HOH A 38 150 46 HOH HOH . J 4 HOH A 39 151 47 HOH HOH . J 4 HOH A 40 152 48 HOH HOH . J 4 HOH A 41 153 49 HOH HOH . J 4 HOH A 42 154 50 HOH HOH . J 4 HOH A 43 155 51 HOH HOH . J 4 HOH A 44 156 52 HOH HOH . J 4 HOH A 45 157 53 HOH HOH . J 4 HOH A 46 158 54 HOH HOH . J 4 HOH A 47 159 55 HOH HOH . J 4 HOH A 48 160 56 HOH HOH . J 4 HOH A 49 161 57 HOH HOH . J 4 HOH A 50 162 58 HOH HOH . J 4 HOH A 51 163 59 HOH HOH . J 4 HOH A 52 164 60 HOH HOH . J 4 HOH A 53 165 61 HOH HOH . J 4 HOH A 54 166 62 HOH HOH . J 4 HOH A 55 167 63 HOH HOH . J 4 HOH A 56 168 64 HOH HOH . J 4 HOH A 57 169 65 HOH HOH . J 4 HOH A 58 170 66 HOH HOH . J 4 HOH A 59 171 67 HOH HOH . J 4 HOH A 60 172 68 HOH HOH . J 4 HOH A 61 173 69 HOH HOH . J 4 HOH A 62 174 70 HOH HOH . J 4 HOH A 63 175 71 HOH HOH . J 4 HOH A 64 176 72 HOH HOH . J 4 HOH A 65 177 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 PG4 . . . E 3 21.978 8.191 -11.626 1 14.47 ? C4 PG4 108 A 1 HETATM 2 O O3 PG4 . . . E 3 20.722 8.296 -11.018 1 30.66 ? O3 PG4 108 A 1 HETATM 3 C C5 PG4 . . . E 3 20.721 8.371 -9.592 1 41.21 ? C5 PG4 108 A 1 HETATM 4 C C6 PG4 . . . E 3 20.737 6.944 -9.065 1 43.94 ? C6 PG4 108 A 1 HETATM 5 O O4 PG4 . . . E 3 21.653 6.776 -7.999 1 53.66 ? O4 PG4 108 A 1 HETATM 6 C C7 PG4 . . . E 3 21.292 5.679 -7.153 1 49.46 ? C7 PG4 108 A 1 HETATM 7 C C8 PG4 . . . E 3 20.318 6.115 -6.069 1 48.66 ? C8 PG4 108 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #