data_2QTM # _model_server_result.job_id uMYnLe9v-ZZhcnO110qaNg _model_server_result.datetime_utc '2024-11-23 21:41:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qtm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":191}' # _entry.id 2QTM # _exptl.entry_id 2QTM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QTM _cell.length_a 97.026 _cell.length_b 97.026 _cell.length_c 85.095 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QTM _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 27 A HIS 27 1_555 C CO CO . A CO 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 C CO CO . A CO 190 1_555 J O HOH . B HOH 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc3 B NE2 HIS 27 B HIS 27 1_555 G CO CO . B CO 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2QTM _atom_sites.fract_transf_matrix[1][1] 0.010307 _atom_sites.fract_transf_matrix[1][2] 0.00595 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 190 1 CO CO . D 3 GOL A 1 191 1 GOL GOL . E 3 GOL A 1 192 2 GOL GOL . F 3 GOL A 1 193 3 GOL GOL . G 2 CO B 1 190 2 CO CO . H 3 GOL B 1 191 4 GOL GOL . I 4 HOH A 1 194 1 HOH WAT . I 4 HOH A 2 195 3 HOH WAT . I 4 HOH A 3 196 6 HOH WAT . I 4 HOH A 4 197 14 HOH WAT . I 4 HOH A 5 198 17 HOH WAT . I 4 HOH A 6 199 18 HOH WAT . I 4 HOH A 7 200 26 HOH WAT . I 4 HOH A 8 201 27 HOH WAT . I 4 HOH A 9 202 28 HOH WAT . I 4 HOH A 10 203 29 HOH WAT . I 4 HOH A 11 204 31 HOH WAT . I 4 HOH A 12 205 35 HOH WAT . I 4 HOH A 13 206 37 HOH WAT . I 4 HOH A 14 207 40 HOH WAT . I 4 HOH A 15 208 41 HOH WAT . I 4 HOH A 16 209 42 HOH WAT . I 4 HOH A 17 210 45 HOH WAT . I 4 HOH A 18 211 48 HOH WAT . I 4 HOH A 19 212 50 HOH WAT . I 4 HOH A 20 213 51 HOH WAT . I 4 HOH A 21 214 54 HOH WAT . I 4 HOH A 22 215 55 HOH WAT . I 4 HOH A 23 216 57 HOH WAT . I 4 HOH A 24 217 60 HOH WAT . I 4 HOH A 25 218 67 HOH WAT . I 4 HOH A 26 219 68 HOH WAT . I 4 HOH A 27 220 73 HOH WAT . I 4 HOH A 28 221 76 HOH WAT . I 4 HOH A 29 222 77 HOH WAT . I 4 HOH A 30 223 78 HOH WAT . I 4 HOH A 31 224 79 HOH WAT . I 4 HOH A 32 225 80 HOH WAT . I 4 HOH A 33 226 81 HOH WAT . I 4 HOH A 34 227 84 HOH WAT . I 4 HOH A 35 228 85 HOH WAT . I 4 HOH A 36 229 86 HOH WAT . I 4 HOH A 37 230 87 HOH WAT . I 4 HOH A 38 231 88 HOH WAT . I 4 HOH A 39 232 90 HOH WAT . I 4 HOH A 40 233 91 HOH WAT . I 4 HOH A 41 234 92 HOH WAT . I 4 HOH A 42 235 97 HOH WAT . I 4 HOH A 43 236 102 HOH WAT . I 4 HOH A 44 237 104 HOH WAT . I 4 HOH A 45 238 106 HOH WAT . I 4 HOH A 46 239 107 HOH WAT . I 4 HOH A 47 240 108 HOH WAT . I 4 HOH A 48 241 111 HOH WAT . I 4 HOH A 49 242 112 HOH WAT . I 4 HOH A 50 243 114 HOH WAT . I 4 HOH A 51 244 115 HOH WAT . I 4 HOH A 52 245 119 HOH WAT . I 4 HOH A 53 246 120 HOH WAT . I 4 HOH A 54 247 121 HOH WAT . I 4 HOH A 55 248 122 HOH WAT . I 4 HOH A 56 249 124 HOH WAT . I 4 HOH A 57 250 125 HOH WAT . J 4 HOH B 1 192 2 HOH WAT . J 4 HOH B 2 193 4 HOH WAT . J 4 HOH B 3 194 5 HOH WAT . J 4 HOH B 4 195 7 HOH WAT . J 4 HOH B 5 196 8 HOH WAT . J 4 HOH B 6 197 9 HOH WAT . J 4 HOH B 7 198 10 HOH WAT . J 4 HOH B 8 199 11 HOH WAT . J 4 HOH B 9 200 12 HOH WAT . J 4 HOH B 10 201 13 HOH WAT . J 4 HOH B 11 202 15 HOH WAT . J 4 HOH B 12 203 16 HOH WAT . J 4 HOH B 13 204 19 HOH WAT . J 4 HOH B 14 205 20 HOH WAT . J 4 HOH B 15 206 21 HOH WAT . J 4 HOH B 16 207 22 HOH WAT . J 4 HOH B 17 208 23 HOH WAT . J 4 HOH B 18 209 24 HOH WAT . J 4 HOH B 19 210 25 HOH WAT . J 4 HOH B 20 211 30 HOH WAT . J 4 HOH B 21 212 32 HOH WAT . J 4 HOH B 22 213 33 HOH WAT . J 4 HOH B 23 214 34 HOH WAT . J 4 HOH B 24 215 36 HOH WAT . J 4 HOH B 25 216 38 HOH WAT . J 4 HOH B 26 217 39 HOH WAT . J 4 HOH B 27 218 43 HOH WAT . J 4 HOH B 28 219 44 HOH WAT . J 4 HOH B 29 220 46 HOH WAT . J 4 HOH B 30 221 47 HOH WAT . J 4 HOH B 31 222 49 HOH WAT . J 4 HOH B 32 223 52 HOH WAT . J 4 HOH B 33 224 53 HOH WAT . J 4 HOH B 34 225 56 HOH WAT . J 4 HOH B 35 226 58 HOH WAT . J 4 HOH B 36 227 59 HOH WAT . J 4 HOH B 37 228 61 HOH WAT . J 4 HOH B 38 229 62 HOH WAT . J 4 HOH B 39 230 63 HOH WAT . J 4 HOH B 40 231 64 HOH WAT . J 4 HOH B 41 232 65 HOH WAT . J 4 HOH B 42 233 66 HOH WAT . J 4 HOH B 43 234 69 HOH WAT . J 4 HOH B 44 235 70 HOH WAT . J 4 HOH B 45 236 71 HOH WAT . J 4 HOH B 46 237 72 HOH WAT . J 4 HOH B 47 238 74 HOH WAT . J 4 HOH B 48 239 75 HOH WAT . J 4 HOH B 49 240 82 HOH WAT . J 4 HOH B 50 241 83 HOH WAT . J 4 HOH B 51 242 89 HOH WAT . J 4 HOH B 52 243 93 HOH WAT . J 4 HOH B 53 244 94 HOH WAT . J 4 HOH B 54 245 95 HOH WAT . J 4 HOH B 55 246 96 HOH WAT . J 4 HOH B 56 247 98 HOH WAT . J 4 HOH B 57 248 99 HOH WAT . J 4 HOH B 58 249 100 HOH WAT . J 4 HOH B 59 250 101 HOH WAT . J 4 HOH B 60 251 103 HOH WAT . J 4 HOH B 61 252 105 HOH WAT . J 4 HOH B 62 253 109 HOH WAT . J 4 HOH B 63 254 110 HOH WAT . J 4 HOH B 64 255 113 HOH WAT . J 4 HOH B 65 256 116 HOH WAT . J 4 HOH B 66 257 117 HOH WAT . J 4 HOH B 67 258 118 HOH WAT . J 4 HOH B 68 259 123 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 3 -30.176 -48.474 21.345 1 57.48 ? C1 GOL 191 B 1 HETATM 2 O O1 GOL . . . H 3 -30.053 -47.055 21.345 1 56.89 ? O1 GOL 191 B 1 HETATM 3 C C2 GOL . . . H 3 -31.456 -48.905 22.114 1 57.86 ? C2 GOL 191 B 1 HETATM 4 O O2 GOL . . . H 3 -31.308 -48.697 23.541 1 53.27 ? O2 GOL 191 B 1 HETATM 5 C C3 GOL . . . H 3 -31.744 -50.391 21.814 1 55.12 ? C3 GOL 191 B 1 HETATM 6 O O3 GOL . . . H 3 -32.466 -50.493 20.59 1 54.78 ? O3 GOL 191 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #