data_2QTV # _model_server_result.job_id adNUP2aEHpoL2dQXy4Qe_Q _model_server_result.datetime_utc '2025-07-03 03:02:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qtv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":800}' # _entry.id 2QTV # _exptl.entry_id 2QTV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QTV _cell.length_a 94.748 _cell.length_b 133.213 _cell.length_c 82.041 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QTV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 60 A CYS 56 1_555 D ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc2 A SG CYS 65 A CYS 61 1_555 D ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc3 A SG CYS 84 A CYS 80 1_555 D ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc4 A SG CYS 87 A CYS 83 1_555 D ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc5 B OG1 THR 15 B THR 37 1_555 E MG MG . B MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc6 B OG1 THR 32 B THR 54 1_555 E MG MG . B MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc7 F O2B GNP . B GNP 200 1_555 E MG MG . B MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc8 F O2G GNP . B GNP 200 1_555 E MG MG . B MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc9 E MG MG . B MG 210 1_555 H O HOH . B HOH 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? metalc ? metalc10 E MG MG . B MG 210 1_555 H O HOH . B HOH 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QTV _atom_sites.fract_transf_matrix[1][1] 0.010554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012189 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 800 800 ZN ZN . E 5 MG B 1 210 210 MG MG . F 6 GNP B 1 200 200 GNP GNP . G 7 HOH A 1 801 1 HOH TIP . G 7 HOH A 2 802 2 HOH TIP . G 7 HOH A 3 803 4 HOH TIP . G 7 HOH A 4 804 6 HOH TIP . G 7 HOH A 5 805 7 HOH TIP . G 7 HOH A 6 806 9 HOH TIP . G 7 HOH A 7 807 10 HOH TIP . G 7 HOH A 8 808 11 HOH TIP . G 7 HOH A 9 809 13 HOH TIP . G 7 HOH A 10 810 14 HOH TIP . G 7 HOH A 11 811 15 HOH TIP . G 7 HOH A 12 812 16 HOH TIP . G 7 HOH A 13 813 17 HOH TIP . G 7 HOH A 14 814 18 HOH TIP . G 7 HOH A 15 815 19 HOH TIP . G 7 HOH A 16 816 20 HOH TIP . G 7 HOH A 17 817 21 HOH TIP . G 7 HOH A 18 818 22 HOH TIP . G 7 HOH A 19 819 23 HOH TIP . G 7 HOH A 20 820 24 HOH TIP . G 7 HOH A 21 821 25 HOH TIP . G 7 HOH A 22 822 26 HOH TIP . G 7 HOH A 23 823 27 HOH TIP . G 7 HOH A 24 824 28 HOH TIP . G 7 HOH A 25 825 29 HOH TIP . G 7 HOH A 26 826 30 HOH TIP . G 7 HOH A 27 827 31 HOH TIP . G 7 HOH A 28 828 32 HOH TIP . G 7 HOH A 29 829 33 HOH TIP . G 7 HOH A 30 830 35 HOH TIP . G 7 HOH A 31 831 37 HOH TIP . G 7 HOH A 32 832 38 HOH TIP . G 7 HOH A 33 833 39 HOH TIP . G 7 HOH A 34 834 40 HOH TIP . G 7 HOH A 35 835 41 HOH TIP . G 7 HOH A 36 836 43 HOH TIP . G 7 HOH A 37 837 44 HOH TIP . G 7 HOH A 38 838 46 HOH TIP . G 7 HOH A 39 839 47 HOH TIP . G 7 HOH A 40 840 48 HOH TIP . G 7 HOH A 41 841 49 HOH TIP . G 7 HOH A 42 842 50 HOH TIP . G 7 HOH A 43 843 51 HOH TIP . G 7 HOH A 44 844 52 HOH TIP . G 7 HOH A 45 845 53 HOH TIP . G 7 HOH A 46 846 54 HOH TIP . G 7 HOH A 47 847 55 HOH TIP . G 7 HOH A 48 848 56 HOH TIP . G 7 HOH A 49 849 57 HOH TIP . G 7 HOH A 50 850 58 HOH TIP . G 7 HOH A 51 851 59 HOH TIP . G 7 HOH A 52 852 61 HOH TIP . G 7 HOH A 53 853 62 HOH TIP . G 7 HOH A 54 854 63 HOH TIP . G 7 HOH A 55 855 65 HOH TIP . G 7 HOH A 56 856 67 HOH TIP . G 7 HOH A 57 857 68 HOH TIP . G 7 HOH A 58 858 69 HOH TIP . G 7 HOH A 59 859 70 HOH TIP . G 7 HOH A 60 860 71 HOH TIP . G 7 HOH A 61 861 74 HOH TIP . G 7 HOH A 62 862 76 HOH TIP . G 7 HOH A 63 863 77 HOH TIP . G 7 HOH A 64 864 79 HOH TIP . G 7 HOH A 65 865 80 HOH TIP . G 7 HOH A 66 866 82 HOH TIP . G 7 HOH A 67 867 83 HOH TIP . G 7 HOH A 68 868 84 HOH TIP . G 7 HOH A 69 869 85 HOH TIP . G 7 HOH A 70 870 86 HOH TIP . G 7 HOH A 71 871 87 HOH TIP . G 7 HOH A 72 872 88 HOH TIP . G 7 HOH A 73 873 89 HOH TIP . G 7 HOH A 74 874 91 HOH TIP . G 7 HOH A 75 875 92 HOH TIP . G 7 HOH A 76 876 95 HOH TIP . G 7 HOH A 77 877 96 HOH TIP . G 7 HOH A 78 878 97 HOH TIP . G 7 HOH A 79 879 98 HOH TIP . G 7 HOH A 80 880 101 HOH TIP . G 7 HOH A 81 881 102 HOH TIP . G 7 HOH A 82 882 103 HOH TIP . G 7 HOH A 83 883 104 HOH TIP . G 7 HOH A 84 884 105 HOH TIP . G 7 HOH A 85 885 106 HOH TIP . G 7 HOH A 86 886 107 HOH TIP . G 7 HOH A 87 887 108 HOH TIP . G 7 HOH A 88 888 110 HOH TIP . G 7 HOH A 89 889 111 HOH TIP . G 7 HOH A 90 890 112 HOH TIP . G 7 HOH A 91 891 114 HOH TIP . G 7 HOH A 92 892 115 HOH TIP . G 7 HOH A 93 893 116 HOH TIP . G 7 HOH A 94 894 117 HOH TIP . G 7 HOH A 95 895 118 HOH TIP . G 7 HOH A 96 896 119 HOH TIP . G 7 HOH A 97 897 120 HOH TIP . G 7 HOH A 98 898 121 HOH TIP . G 7 HOH A 99 899 122 HOH TIP . G 7 HOH A 100 900 123 HOH TIP . G 7 HOH A 101 901 124 HOH TIP . G 7 HOH A 102 902 125 HOH TIP . G 7 HOH A 103 903 126 HOH TIP . G 7 HOH A 104 904 127 HOH TIP . G 7 HOH A 105 905 128 HOH TIP . G 7 HOH A 106 906 129 HOH TIP . G 7 HOH A 107 907 132 HOH TIP . G 7 HOH A 108 908 133 HOH TIP . G 7 HOH A 109 909 134 HOH TIP . G 7 HOH A 110 910 135 HOH TIP . G 7 HOH A 111 911 136 HOH TIP . G 7 HOH A 112 912 137 HOH TIP . G 7 HOH A 113 913 138 HOH TIP . G 7 HOH A 114 914 139 HOH TIP . G 7 HOH A 115 915 140 HOH TIP . G 7 HOH A 116 916 141 HOH TIP . G 7 HOH A 117 917 142 HOH TIP . G 7 HOH A 118 918 143 HOH TIP . G 7 HOH A 119 919 144 HOH TIP . G 7 HOH A 120 920 146 HOH TIP . G 7 HOH A 121 921 148 HOH TIP . G 7 HOH A 122 922 149 HOH TIP . G 7 HOH A 123 923 150 HOH TIP . G 7 HOH A 124 924 151 HOH TIP . G 7 HOH A 125 925 152 HOH TIP . G 7 HOH A 126 926 153 HOH TIP . G 7 HOH A 127 927 154 HOH TIP . G 7 HOH A 128 928 155 HOH TIP . G 7 HOH A 129 929 156 HOH TIP . G 7 HOH A 130 930 157 HOH TIP . G 7 HOH A 131 931 158 HOH TIP . G 7 HOH A 132 932 159 HOH TIP . G 7 HOH A 133 933 160 HOH TIP . G 7 HOH A 134 934 161 HOH TIP . G 7 HOH A 135 935 162 HOH TIP . G 7 HOH A 136 936 163 HOH TIP . G 7 HOH A 137 937 164 HOH TIP . G 7 HOH A 138 938 165 HOH TIP . G 7 HOH A 139 939 166 HOH TIP . G 7 HOH A 140 940 167 HOH TIP . G 7 HOH A 141 941 168 HOH TIP . G 7 HOH A 142 942 169 HOH TIP . G 7 HOH A 143 943 170 HOH TIP . G 7 HOH A 144 944 171 HOH TIP . G 7 HOH A 145 945 172 HOH TIP . G 7 HOH A 146 946 173 HOH TIP . G 7 HOH A 147 947 174 HOH TIP . G 7 HOH A 148 948 175 HOH TIP . G 7 HOH A 149 949 176 HOH TIP . G 7 HOH A 150 950 177 HOH TIP . G 7 HOH A 151 951 179 HOH TIP . G 7 HOH A 152 952 180 HOH TIP . G 7 HOH A 153 953 181 HOH TIP . G 7 HOH A 154 954 182 HOH TIP . G 7 HOH A 155 955 183 HOH TIP . G 7 HOH A 156 956 184 HOH TIP . G 7 HOH A 157 957 185 HOH TIP . G 7 HOH A 158 958 186 HOH TIP . G 7 HOH A 159 959 189 HOH TIP . G 7 HOH A 160 960 190 HOH TIP . G 7 HOH A 161 961 191 HOH TIP . G 7 HOH A 162 962 192 HOH TIP . G 7 HOH A 163 963 195 HOH TIP . G 7 HOH A 164 964 196 HOH TIP . G 7 HOH A 165 965 198 HOH TIP . G 7 HOH A 166 966 199 HOH TIP . G 7 HOH A 167 967 200 HOH TIP . G 7 HOH A 168 968 201 HOH TIP . G 7 HOH A 169 969 202 HOH TIP . G 7 HOH A 170 970 203 HOH TIP . G 7 HOH A 171 971 204 HOH TIP . G 7 HOH A 172 972 205 HOH TIP . G 7 HOH A 173 973 207 HOH TIP . G 7 HOH A 174 974 208 HOH TIP . G 7 HOH A 175 975 209 HOH TIP . G 7 HOH A 176 976 210 HOH TIP . G 7 HOH A 177 977 211 HOH TIP . G 7 HOH A 178 978 212 HOH TIP . G 7 HOH A 179 979 213 HOH TIP . G 7 HOH A 180 980 215 HOH TIP . G 7 HOH A 181 981 216 HOH TIP . G 7 HOH A 182 982 217 HOH TIP . G 7 HOH A 183 983 219 HOH TIP . G 7 HOH A 184 984 221 HOH TIP . G 7 HOH A 185 985 222 HOH TIP . G 7 HOH A 186 986 223 HOH TIP . G 7 HOH A 187 987 224 HOH TIP . G 7 HOH A 188 988 225 HOH TIP . G 7 HOH A 189 989 226 HOH TIP . G 7 HOH A 190 990 228 HOH TIP . G 7 HOH A 191 991 229 HOH TIP . G 7 HOH A 192 992 230 HOH TIP . G 7 HOH A 193 993 231 HOH TIP . H 7 HOH B 1 211 3 HOH TIP . H 7 HOH B 2 212 5 HOH TIP . H 7 HOH B 3 213 8 HOH TIP . H 7 HOH B 4 214 12 HOH TIP . H 7 HOH B 5 215 34 HOH TIP . H 7 HOH B 6 216 36 HOH TIP . H 7 HOH B 7 217 42 HOH TIP . H 7 HOH B 8 218 45 HOH TIP . H 7 HOH B 9 219 60 HOH TIP . H 7 HOH B 10 220 64 HOH TIP . H 7 HOH B 11 221 66 HOH TIP . H 7 HOH B 12 222 72 HOH TIP . H 7 HOH B 13 223 73 HOH TIP . H 7 HOH B 14 224 75 HOH TIP . H 7 HOH B 15 225 81 HOH TIP . H 7 HOH B 16 226 90 HOH TIP . H 7 HOH B 17 227 93 HOH TIP . H 7 HOH B 18 228 94 HOH TIP . H 7 HOH B 19 229 99 HOH TIP . H 7 HOH B 20 230 100 HOH TIP . H 7 HOH B 21 231 109 HOH TIP . H 7 HOH B 22 232 130 HOH TIP . H 7 HOH B 23 233 131 HOH TIP . H 7 HOH B 24 234 145 HOH TIP . H 7 HOH B 25 235 178 HOH TIP . H 7 HOH B 26 236 187 HOH TIP . H 7 HOH B 27 237 188 HOH TIP . H 7 HOH B 28 238 193 HOH TIP . H 7 HOH B 29 239 194 HOH TIP . H 7 HOH B 30 240 197 HOH TIP . H 7 HOH B 31 241 206 HOH TIP . I 7 HOH D 1 78 78 HOH TIP . I 7 HOH D 2 113 113 HOH TIP . I 7 HOH D 3 147 147 HOH TIP . I 7 HOH D 4 214 214 HOH TIP . I 7 HOH D 5 218 218 HOH TIP . I 7 HOH D 6 220 220 HOH TIP . I 7 HOH D 7 227 227 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 32.571 _atom_site.Cartn_y 50.751 _atom_site.Cartn_z 35.155 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 800 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 1 #