data_2QVF
#
_model_server_result.job_id            ae4CbDFsjjjkMQ8Pt1c0ag 
_model_server_result.datetime_utc      '2024-10-18 14:36:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qvf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    2QVF 
#
_exptl.entry_id    2QVF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.97 
_cell.angle_gamma         90 
_cell.entry_id            2QVF 
_cell.length_a            134.711 
_cell.length_b            42.669 
_cell.length_c            58.132 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QVF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 11 B GLU 11 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc2 A OE1 GLU 11 B GLU 11 1_555 D CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc3 A OD1 ASP 67 B ASP 67 1_555 D CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc4 A OE1 GLU 69 B GLU 69 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? 
metalc ? metalc5 A OE2 GLU 69 B GLU 69 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? 
metalc ? metalc6 A OE1 GLU 69 B GLU 69 1_555 D CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? 
metalc ? metalc7 A OD1 ASP 100 B ASP 100 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc8 A O GLN 101 B GLN 101 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc9 A OD1 ASN 102 B ASN 102 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc10 A OD1 ASP 103 B ASP 103 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc11 A OD2 ASP 103 B ASP 103 1_555 D CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
metalc ? metalc12 A O ASN 104 B ASN 104 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? 
metalc ? metalc13 A OE1 GLU 119 B GLU 119 1_555 E CA CA . B CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? 
metalc ? metalc14 A OE2 GLU 119 B GLU 119 1_555 E CA CA . B CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc15 A OD1 ASP 134 B ASP 134 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? 
metalc ? metalc16 A OD2 ASP 134 B ASP 134 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? 
metalc ? metalc17 A OD1 ASP 136 B ASP 136 1_555 B CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc18 A OD2 ASP 136 B ASP 136 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc19 A O ASN 143 B ASN 143 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc20 A OD1 ASP 180 B ASP 180 1_555 E CA CA . B CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc21 A OE2 GLU 182 B GLU 182 1_555 E CA CA . B CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc22 A OD2 ASP 195 B ASP 195 1_555 C CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? 
metalc ? metalc23 E CA CA . B CA 704 1_555 F O HOH . B HOH 815 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2QVF 
_atom_sites.fract_transf_matrix[1][1]    0.007423 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002994 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023436 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018549 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA B 1 701 701 CA CA . 
C 2 CA B 1 702 702 CA CA . 
D 2 CA B 1 703 703 CA CA . 
E 2 CA B 1 704 704 CA CA . 
F 3 HOH B 1 705 1 HOH HOH . 
F 3 HOH B 2 706 3 HOH HOH . 
F 3 HOH B 3 707 4 HOH HOH . 
F 3 HOH B 4 708 5 HOH HOH . 
F 3 HOH B 5 709 7 HOH HOH . 
F 3 HOH B 6 710 9 HOH HOH . 
F 3 HOH B 7 711 13 HOH HOH . 
F 3 HOH B 8 712 14 HOH HOH . 
F 3 HOH B 9 713 15 HOH HOH . 
F 3 HOH B 10 714 17 HOH HOH . 
F 3 HOH B 11 715 18 HOH HOH . 
F 3 HOH B 12 716 23 HOH HOH . 
F 3 HOH B 13 717 26 HOH HOH . 
F 3 HOH B 14 718 30 HOH HOH . 
F 3 HOH B 15 719 32 HOH HOH . 
F 3 HOH B 16 720 33 HOH HOH . 
F 3 HOH B 17 721 35 HOH HOH . 
F 3 HOH B 18 722 38 HOH HOH . 
F 3 HOH B 19 723 42 HOH HOH . 
F 3 HOH B 20 724 46 HOH HOH . 
F 3 HOH B 21 725 49 HOH HOH . 
F 3 HOH B 22 726 50 HOH HOH . 
F 3 HOH B 23 727 51 HOH HOH . 
F 3 HOH B 24 728 53 HOH HOH . 
F 3 HOH B 25 729 54 HOH HOH . 
F 3 HOH B 26 730 56 HOH HOH . 
F 3 HOH B 27 731 57 HOH HOH . 
F 3 HOH B 28 732 59 HOH HOH . 
F 3 HOH B 29 733 60 HOH HOH . 
F 3 HOH B 30 734 66 HOH HOH . 
F 3 HOH B 31 735 73 HOH HOH . 
F 3 HOH B 32 736 74 HOH HOH . 
F 3 HOH B 33 737 78 HOH HOH . 
F 3 HOH B 34 738 85 HOH HOH . 
F 3 HOH B 35 739 86 HOH HOH . 
F 3 HOH B 36 740 91 HOH HOH . 
F 3 HOH B 37 741 92 HOH HOH . 
F 3 HOH B 38 742 99 HOH HOH . 
F 3 HOH B 39 743 100 HOH HOH . 
F 3 HOH B 40 744 101 HOH HOH . 
F 3 HOH B 41 745 103 HOH HOH . 
F 3 HOH B 42 746 105 HOH HOH . 
F 3 HOH B 43 747 109 HOH HOH . 
F 3 HOH B 44 748 112 HOH HOH . 
F 3 HOH B 45 749 113 HOH HOH . 
F 3 HOH B 46 750 116 HOH HOH . 
F 3 HOH B 47 751 119 HOH HOH . 
F 3 HOH B 48 752 127 HOH HOH . 
F 3 HOH B 49 753 129 HOH HOH . 
F 3 HOH B 50 754 130 HOH HOH . 
F 3 HOH B 51 755 132 HOH HOH . 
F 3 HOH B 52 756 134 HOH HOH . 
F 3 HOH B 53 757 137 HOH HOH . 
F 3 HOH B 54 758 138 HOH HOH . 
F 3 HOH B 55 759 141 HOH HOH . 
F 3 HOH B 56 760 145 HOH HOH . 
F 3 HOH B 57 761 150 HOH HOH . 
F 3 HOH B 58 762 154 HOH HOH . 
F 3 HOH B 59 763 157 HOH HOH . 
F 3 HOH B 60 764 158 HOH HOH . 
F 3 HOH B 61 765 159 HOH HOH . 
F 3 HOH B 62 766 163 HOH HOH . 
F 3 HOH B 63 767 165 HOH HOH . 
F 3 HOH B 64 768 176 HOH HOH . 
F 3 HOH B 65 769 177 HOH HOH . 
F 3 HOH B 66 770 178 HOH HOH . 
F 3 HOH B 67 771 181 HOH HOH . 
F 3 HOH B 68 772 183 HOH HOH . 
F 3 HOH B 69 773 184 HOH HOH . 
F 3 HOH B 70 774 185 HOH HOH . 
F 3 HOH B 71 775 188 HOH HOH . 
F 3 HOH B 72 776 190 HOH HOH . 
F 3 HOH B 73 777 192 HOH HOH . 
F 3 HOH B 74 778 193 HOH HOH . 
F 3 HOH B 75 779 194 HOH HOH . 
F 3 HOH B 76 780 195 HOH HOH . 
F 3 HOH B 77 781 198 HOH HOH . 
F 3 HOH B 78 782 199 HOH HOH . 
F 3 HOH B 79 783 203 HOH HOH . 
F 3 HOH B 80 784 204 HOH HOH . 
F 3 HOH B 81 785 205 HOH HOH . 
F 3 HOH B 82 786 206 HOH HOH . 
F 3 HOH B 83 787 208 HOH HOH . 
F 3 HOH B 84 788 211 HOH HOH . 
F 3 HOH B 85 789 215 HOH HOH . 
F 3 HOH B 86 790 218 HOH HOH . 
F 3 HOH B 87 791 220 HOH HOH . 
F 3 HOH B 88 792 221 HOH HOH . 
F 3 HOH B 89 793 222 HOH HOH . 
F 3 HOH B 90 794 224 HOH HOH . 
F 3 HOH B 91 795 226 HOH HOH . 
F 3 HOH B 92 796 228 HOH HOH . 
F 3 HOH B 93 797 229 HOH HOH . 
F 3 HOH B 94 798 230 HOH HOH . 
F 3 HOH B 95 799 236 HOH HOH . 
F 3 HOH B 96 800 237 HOH HOH . 
F 3 HOH B 97 801 238 HOH HOH . 
F 3 HOH B 98 802 239 HOH HOH . 
F 3 HOH B 99 803 240 HOH HOH . 
F 3 HOH B 100 804 241 HOH HOH . 
F 3 HOH B 101 805 242 HOH HOH . 
F 3 HOH B 102 806 243 HOH HOH . 
F 3 HOH B 103 807 244 HOH HOH . 
F 3 HOH B 104 808 245 HOH HOH . 
F 3 HOH B 105 809 246 HOH HOH . 
F 3 HOH B 106 810 247 HOH HOH . 
F 3 HOH B 107 811 248 HOH HOH . 
F 3 HOH B 108 812 249 HOH HOH . 
F 3 HOH B 109 813 250 HOH HOH . 
F 3 HOH B 110 814 251 HOH HOH . 
F 3 HOH B 111 815 252 HOH HOH . 
F 3 HOH B 112 816 253 HOH HOH . 
F 3 HOH B 113 817 254 HOH HOH . 
F 3 HOH B 114 818 1 HOH HOH . 
F 3 HOH B 115 819 2 HOH HOH . 
F 3 HOH B 116 820 3 HOH HOH . 
F 3 HOH B 117 821 4 HOH HOH . 
F 3 HOH B 118 822 6 HOH HOH . 
F 3 HOH B 119 823 7 HOH HOH . 
F 3 HOH B 120 824 8 HOH HOH . 
F 3 HOH B 121 825 9 HOH HOH . 
F 3 HOH B 122 826 10 HOH HOH . 
F 3 HOH B 123 827 11 HOH HOH . 
F 3 HOH B 124 828 12 HOH HOH . 
F 3 HOH B 125 829 13 HOH HOH . 
F 3 HOH B 126 830 14 HOH HOH . 
F 3 HOH B 127 831 15 HOH HOH . 
F 3 HOH B 128 832 16 HOH HOH . 
F 3 HOH B 129 833 17 HOH HOH . 
F 3 HOH B 130 834 18 HOH HOH . 
F 3 HOH B 131 835 19 HOH HOH . 
F 3 HOH B 132 836 20 HOH HOH . 
F 3 HOH B 133 837 22 HOH HOH . 
F 3 HOH B 134 838 23 HOH HOH . 
F 3 HOH B 135 839 24 HOH HOH . 
F 3 HOH B 136 840 25 HOH HOH . 
F 3 HOH B 137 841 26 HOH HOH . 
F 3 HOH B 138 842 27 HOH HOH . 
F 3 HOH B 139 843 28 HOH HOH . 
F 3 HOH B 140 844 29 HOH HOH . 
F 3 HOH B 141 845 30 HOH HOH . 
F 3 HOH B 142 846 32 HOH HOH . 
F 3 HOH B 143 847 33 HOH HOH . 
F 3 HOH B 144 848 34 HOH HOH . 
F 3 HOH B 145 849 35 HOH HOH . 
F 3 HOH B 146 850 36 HOH HOH . 
F 3 HOH B 147 851 37 HOH HOH . 
F 3 HOH B 148 852 38 HOH HOH . 
F 3 HOH B 149 853 39 HOH HOH . 
F 3 HOH B 150 854 40 HOH HOH . 
F 3 HOH B 151 855 41 HOH HOH . 
F 3 HOH B 152 856 42 HOH HOH . 
F 3 HOH B 153 857 43 HOH HOH . 
F 3 HOH B 154 858 44 HOH HOH . 
F 3 HOH B 155 859 45 HOH HOH . 
F 3 HOH B 156 860 46 HOH HOH . 
F 3 HOH B 157 861 47 HOH HOH . 
F 3 HOH B 158 862 48 HOH HOH . 
F 3 HOH B 159 863 49 HOH HOH . 
F 3 HOH B 160 864 50 HOH HOH . 
F 3 HOH B 161 865 51 HOH HOH . 
F 3 HOH B 162 866 52 HOH HOH . 
F 3 HOH B 163 867 53 HOH HOH . 
F 3 HOH B 164 868 54 HOH HOH . 
F 3 HOH B 165 869 55 HOH HOH . 
F 3 HOH B 166 870 56 HOH HOH . 
F 3 HOH B 167 871 57 HOH HOH . 
F 3 HOH B 168 872 58 HOH HOH . 
F 3 HOH B 169 873 59 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               8.956 
_atom_site.Cartn_y               -2.22 
_atom_site.Cartn_z               19.77 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        27.21 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           701 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#