data_2QVV # _model_server_result.job_id jkDHBdi2_CNkKvhAaHkxfw _model_server_result.datetime_utc '2024-10-20 19:23:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qvv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 2QVV # _exptl.entry_id 2QVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QVV _cell.length_a 59.038 _cell.length_b 165.709 _cell.length_c 79.167 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 59.038 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 118 A ASP 118 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc2 A OD2 ASP 121 A ASP 121 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc3 A OE2 GLU 280 A GLU 280 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc4 C O1 FDP . A FDP 402 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc5 D ZN ZN . A ZN 403 1_555 I O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc6 B OD2 ASP 118 B ASP 118 1_555 G ZN ZN . B ZN 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc7 B OD2 ASP 121 B ASP 121 1_555 G ZN ZN . B ZN 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc8 B OE1 GLU 280 B GLU 280 1_555 G ZN ZN . B ZN 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc9 F O1 FDP . B FDP 338 1_555 G ZN ZN . B ZN 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc10 G ZN ZN . B ZN 339 1_555 J O HOH . B HOH 673 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QVV _atom_sites.fract_transf_matrix[1][1] 0.016938 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006035 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012632 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FDP A 1 402 402 FDP FDP . D 3 ZN A 1 403 403 ZN ZN . E 4 PO4 A 1 400 400 PO4 PO4 . F 2 FDP B 1 338 338 FDP FDP . G 3 ZN B 1 339 339 ZN ZN . H 4 PO4 B 1 401 401 PO4 PO4 . I 5 HOH A 1 410 410 HOH HOH . I 5 HOH A 2 412 412 HOH HOH . I 5 HOH A 3 414 414 HOH HOH . I 5 HOH A 4 416 416 HOH HOH . I 5 HOH A 5 418 418 HOH HOH . I 5 HOH A 6 420 420 HOH HOH . I 5 HOH A 7 421 421 HOH HOH . I 5 HOH A 8 423 423 HOH HOH . I 5 HOH A 9 426 426 HOH HOH . I 5 HOH A 10 427 427 HOH HOH . I 5 HOH A 11 428 428 HOH HOH . I 5 HOH A 12 432 432 HOH HOH . I 5 HOH A 13 433 433 HOH HOH . I 5 HOH A 14 434 434 HOH HOH . I 5 HOH A 15 437 437 HOH HOH . I 5 HOH A 16 438 438 HOH HOH . I 5 HOH A 17 439 439 HOH HOH . I 5 HOH A 18 440 440 HOH HOH . I 5 HOH A 19 443 443 HOH HOH . I 5 HOH A 20 445 445 HOH HOH . I 5 HOH A 21 447 447 HOH HOH . I 5 HOH A 22 449 449 HOH HOH . I 5 HOH A 23 454 454 HOH HOH . I 5 HOH A 24 456 456 HOH HOH . I 5 HOH A 25 457 457 HOH HOH . I 5 HOH A 26 460 460 HOH HOH . I 5 HOH A 27 462 462 HOH HOH . I 5 HOH A 28 465 465 HOH HOH . I 5 HOH A 29 466 466 HOH HOH . I 5 HOH A 30 468 468 HOH HOH . I 5 HOH A 31 478 478 HOH HOH . I 5 HOH A 32 479 479 HOH HOH . I 5 HOH A 33 480 480 HOH HOH . I 5 HOH A 34 483 483 HOH HOH . I 5 HOH A 35 485 485 HOH HOH . I 5 HOH A 36 492 492 HOH HOH . I 5 HOH A 37 498 498 HOH HOH . I 5 HOH A 38 501 501 HOH HOH . I 5 HOH A 39 502 502 HOH HOH . I 5 HOH A 40 503 503 HOH HOH . I 5 HOH A 41 504 504 HOH HOH . I 5 HOH A 42 506 506 HOH HOH . I 5 HOH A 43 507 507 HOH HOH . I 5 HOH A 44 508 508 HOH HOH . I 5 HOH A 45 509 509 HOH HOH . I 5 HOH A 46 511 511 HOH HOH . I 5 HOH A 47 512 512 HOH HOH . I 5 HOH A 48 514 514 HOH HOH . I 5 HOH A 49 515 515 HOH HOH . I 5 HOH A 50 516 516 HOH HOH . I 5 HOH A 51 517 517 HOH HOH . I 5 HOH A 52 521 521 HOH HOH . I 5 HOH A 53 523 523 HOH HOH . I 5 HOH A 54 524 524 HOH HOH . I 5 HOH A 55 526 526 HOH HOH . I 5 HOH A 56 527 527 HOH HOH . I 5 HOH A 57 528 528 HOH HOH . I 5 HOH A 58 532 532 HOH HOH . I 5 HOH A 59 534 534 HOH HOH . I 5 HOH A 60 535 535 HOH HOH . I 5 HOH A 61 536 536 HOH HOH . I 5 HOH A 62 538 538 HOH HOH . I 5 HOH A 63 542 542 HOH HOH . I 5 HOH A 64 546 546 HOH HOH . I 5 HOH A 65 547 547 HOH HOH . I 5 HOH A 66 548 548 HOH HOH . I 5 HOH A 67 551 551 HOH HOH . I 5 HOH A 68 552 552 HOH HOH . I 5 HOH A 69 554 554 HOH HOH . I 5 HOH A 70 555 555 HOH HOH . I 5 HOH A 71 557 557 HOH HOH . I 5 HOH A 72 558 558 HOH HOH . I 5 HOH A 73 560 560 HOH HOH . I 5 HOH A 74 562 562 HOH HOH . I 5 HOH A 75 563 563 HOH HOH . I 5 HOH A 76 565 565 HOH HOH . I 5 HOH A 77 572 572 HOH HOH . I 5 HOH A 78 575 575 HOH HOH . I 5 HOH A 79 580 580 HOH HOH . I 5 HOH A 80 581 581 HOH HOH . I 5 HOH A 81 582 582 HOH HOH . I 5 HOH A 82 583 583 HOH HOH . I 5 HOH A 83 586 586 HOH HOH . I 5 HOH A 84 587 587 HOH HOH . I 5 HOH A 85 588 588 HOH HOH . I 5 HOH A 86 589 589 HOH HOH . I 5 HOH A 87 590 590 HOH HOH . I 5 HOH A 88 591 591 HOH HOH . I 5 HOH A 89 593 593 HOH HOH . I 5 HOH A 90 594 594 HOH HOH . I 5 HOH A 91 596 596 HOH HOH . I 5 HOH A 92 597 597 HOH HOH . I 5 HOH A 93 598 598 HOH HOH . I 5 HOH A 94 602 602 HOH HOH . I 5 HOH A 95 604 604 HOH HOH . I 5 HOH A 96 605 605 HOH HOH . I 5 HOH A 97 609 609 HOH HOH . I 5 HOH A 98 610 610 HOH HOH . I 5 HOH A 99 611 611 HOH HOH . I 5 HOH A 100 613 613 HOH HOH . I 5 HOH A 101 615 615 HOH HOH . I 5 HOH A 102 616 616 HOH HOH . I 5 HOH A 103 617 617 HOH HOH . I 5 HOH A 104 618 618 HOH HOH . I 5 HOH A 105 619 619 HOH HOH . I 5 HOH A 106 620 620 HOH HOH . I 5 HOH A 107 621 621 HOH HOH . I 5 HOH A 108 622 622 HOH HOH . I 5 HOH A 109 623 623 HOH HOH . I 5 HOH A 110 624 624 HOH HOH . I 5 HOH A 111 625 625 HOH HOH . I 5 HOH A 112 626 626 HOH HOH . I 5 HOH A 113 627 627 HOH HOH . I 5 HOH A 114 628 628 HOH HOH . I 5 HOH A 115 641 641 HOH HOH . I 5 HOH A 116 644 644 HOH HOH . I 5 HOH A 117 645 645 HOH HOH . I 5 HOH A 118 646 646 HOH HOH . I 5 HOH A 119 647 647 HOH HOH . I 5 HOH A 120 653 653 HOH HOH . I 5 HOH A 121 654 654 HOH HOH . I 5 HOH A 122 656 656 HOH HOH . I 5 HOH A 123 657 657 HOH HOH . I 5 HOH A 124 659 659 HOH HOH . I 5 HOH A 125 660 660 HOH HOH . I 5 HOH A 126 664 664 HOH HOH . I 5 HOH A 127 666 666 HOH HOH . I 5 HOH A 128 671 671 HOH HOH . I 5 HOH A 129 672 672 HOH HOH . J 5 HOH B 1 405 405 HOH HOH . J 5 HOH B 2 406 406 HOH HOH . J 5 HOH B 3 407 407 HOH HOH . J 5 HOH B 4 408 408 HOH HOH . J 5 HOH B 5 409 409 HOH HOH . J 5 HOH B 6 411 411 HOH HOH . J 5 HOH B 7 413 413 HOH HOH . J 5 HOH B 8 415 415 HOH HOH . J 5 HOH B 9 417 417 HOH HOH . J 5 HOH B 10 419 419 HOH HOH . J 5 HOH B 11 422 422 HOH HOH . J 5 HOH B 12 424 424 HOH HOH . J 5 HOH B 13 425 425 HOH HOH . J 5 HOH B 14 429 429 HOH HOH . J 5 HOH B 15 430 430 HOH HOH . J 5 HOH B 16 431 431 HOH HOH . J 5 HOH B 17 435 435 HOH HOH . J 5 HOH B 18 436 436 HOH HOH . J 5 HOH B 19 441 441 HOH HOH . J 5 HOH B 20 442 442 HOH HOH . J 5 HOH B 21 444 444 HOH HOH . J 5 HOH B 22 446 446 HOH HOH . J 5 HOH B 23 448 448 HOH HOH . J 5 HOH B 24 450 450 HOH HOH . J 5 HOH B 25 451 451 HOH HOH . J 5 HOH B 26 452 452 HOH HOH . J 5 HOH B 27 453 453 HOH HOH . J 5 HOH B 28 455 455 HOH HOH . J 5 HOH B 29 458 458 HOH HOH . J 5 HOH B 30 459 459 HOH HOH . J 5 HOH B 31 461 461 HOH HOH . J 5 HOH B 32 463 463 HOH HOH . J 5 HOH B 33 464 464 HOH HOH . J 5 HOH B 34 467 467 HOH HOH . J 5 HOH B 35 469 469 HOH HOH . J 5 HOH B 36 470 470 HOH HOH . J 5 HOH B 37 471 471 HOH HOH . J 5 HOH B 38 472 472 HOH HOH . J 5 HOH B 39 473 473 HOH HOH . J 5 HOH B 40 474 474 HOH HOH . J 5 HOH B 41 475 475 HOH HOH . J 5 HOH B 42 476 476 HOH HOH . J 5 HOH B 43 477 477 HOH HOH . J 5 HOH B 44 481 481 HOH HOH . J 5 HOH B 45 482 482 HOH HOH . J 5 HOH B 46 484 484 HOH HOH . J 5 HOH B 47 486 486 HOH HOH . J 5 HOH B 48 487 487 HOH HOH . J 5 HOH B 49 488 488 HOH HOH . J 5 HOH B 50 489 489 HOH HOH . J 5 HOH B 51 490 490 HOH HOH . J 5 HOH B 52 491 491 HOH HOH . J 5 HOH B 53 493 493 HOH HOH . J 5 HOH B 54 494 494 HOH HOH . J 5 HOH B 55 495 495 HOH HOH . J 5 HOH B 56 496 496 HOH HOH . J 5 HOH B 57 497 497 HOH HOH . J 5 HOH B 58 499 499 HOH HOH . J 5 HOH B 59 500 500 HOH HOH . J 5 HOH B 60 505 505 HOH HOH . J 5 HOH B 61 510 510 HOH HOH . J 5 HOH B 62 513 513 HOH HOH . J 5 HOH B 63 518 518 HOH HOH . J 5 HOH B 64 519 519 HOH HOH . J 5 HOH B 65 520 520 HOH HOH . J 5 HOH B 66 522 522 HOH HOH . J 5 HOH B 67 525 525 HOH HOH . J 5 HOH B 68 529 529 HOH HOH . J 5 HOH B 69 530 530 HOH HOH . J 5 HOH B 70 531 531 HOH HOH . J 5 HOH B 71 533 533 HOH HOH . J 5 HOH B 72 537 537 HOH HOH . J 5 HOH B 73 539 539 HOH HOH . J 5 HOH B 74 540 540 HOH HOH . J 5 HOH B 75 541 541 HOH HOH . J 5 HOH B 76 543 543 HOH HOH . J 5 HOH B 77 544 544 HOH HOH . J 5 HOH B 78 545 545 HOH HOH . J 5 HOH B 79 549 549 HOH HOH . J 5 HOH B 80 550 550 HOH HOH . J 5 HOH B 81 553 553 HOH HOH . J 5 HOH B 82 556 556 HOH HOH . J 5 HOH B 83 559 559 HOH HOH . J 5 HOH B 84 561 561 HOH HOH . J 5 HOH B 85 564 564 HOH HOH . J 5 HOH B 86 566 566 HOH HOH . J 5 HOH B 87 567 567 HOH HOH . J 5 HOH B 88 568 568 HOH HOH . J 5 HOH B 89 569 569 HOH HOH . J 5 HOH B 90 570 570 HOH HOH . J 5 HOH B 91 571 571 HOH HOH . J 5 HOH B 92 573 573 HOH HOH . J 5 HOH B 93 574 574 HOH HOH . J 5 HOH B 94 576 576 HOH HOH . J 5 HOH B 95 577 577 HOH HOH . J 5 HOH B 96 578 578 HOH HOH . J 5 HOH B 97 579 579 HOH HOH . J 5 HOH B 98 584 584 HOH HOH . J 5 HOH B 99 585 585 HOH HOH . J 5 HOH B 100 592 592 HOH HOH . J 5 HOH B 101 595 595 HOH HOH . J 5 HOH B 102 599 599 HOH HOH . J 5 HOH B 103 600 600 HOH HOH . J 5 HOH B 104 601 601 HOH HOH . J 5 HOH B 105 603 603 HOH HOH . J 5 HOH B 106 606 606 HOH HOH . J 5 HOH B 107 607 607 HOH HOH . J 5 HOH B 108 608 608 HOH HOH . J 5 HOH B 109 612 612 HOH HOH . J 5 HOH B 110 614 614 HOH HOH . J 5 HOH B 111 629 629 HOH HOH . J 5 HOH B 112 630 630 HOH HOH . J 5 HOH B 113 631 631 HOH HOH . J 5 HOH B 114 632 632 HOH HOH . J 5 HOH B 115 633 633 HOH HOH . J 5 HOH B 116 634 634 HOH HOH . J 5 HOH B 117 635 635 HOH HOH . J 5 HOH B 118 636 636 HOH HOH . J 5 HOH B 119 637 637 HOH HOH . J 5 HOH B 120 638 638 HOH HOH . J 5 HOH B 121 639 639 HOH HOH . J 5 HOH B 122 640 640 HOH HOH . J 5 HOH B 123 642 642 HOH HOH . J 5 HOH B 124 643 643 HOH HOH . J 5 HOH B 125 648 648 HOH HOH . J 5 HOH B 126 649 649 HOH HOH . J 5 HOH B 127 650 650 HOH HOH . J 5 HOH B 128 651 651 HOH HOH . J 5 HOH B 129 652 652 HOH HOH . J 5 HOH B 130 655 655 HOH HOH . J 5 HOH B 131 658 658 HOH HOH . J 5 HOH B 132 661 661 HOH HOH . J 5 HOH B 133 662 662 HOH HOH . J 5 HOH B 134 663 663 HOH HOH . J 5 HOH B 135 665 665 HOH HOH . J 5 HOH B 136 667 667 HOH HOH . J 5 HOH B 137 668 668 HOH HOH . J 5 HOH B 138 669 669 HOH HOH . J 5 HOH B 139 670 670 HOH HOH . J 5 HOH B 140 673 673 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 17.194 _atom_site.Cartn_y 22.704 _atom_site.Cartn_z 30.625 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #