data_2QW7 # _model_server_result.job_id Qe8iC3wHgMU7OS2-pm-CLw _model_server_result.datetime_utc '2025-02-13 20:00:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qw7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":202}' # _entry.id 2QW7 # _exptl.entry_id 2QW7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.51 _cell.angle_gamma 90 _cell.entry_id 2QW7 _cell.length_a 64.428 _cell.length_b 107.444 _cell.length_c 72.264 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,O,P,Q,R,S 1 1 F,G,H,I,J,M,N,T,U,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 2QW7 _atom_sites.fract_transf_matrix[1][1] 0.015521 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001771 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009307 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013928 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 GOL B 1 200 200 GOL GOL . L 2 GOL B 1 201 201 GOL GOL . M 2 GOL G 1 203 203 GOL GOL . N 2 GOL G 1 202 202 GOL GOL . O 3 HOH A 1 112 17 HOH HOH . O 3 HOH A 2 113 42 HOH HOH . O 3 HOH A 3 114 45 HOH HOH . O 3 HOH A 4 115 65 HOH HOH . O 3 HOH A 5 116 71 HOH HOH . O 3 HOH A 6 117 76 HOH HOH . O 3 HOH A 7 118 82 HOH HOH . O 3 HOH A 8 119 123 HOH HOH . O 3 HOH A 9 121 139 HOH HOH . O 3 HOH A 10 122 175 HOH HOH . O 3 HOH A 11 123 176 HOH HOH . O 3 HOH A 12 124 183 HOH HOH . O 3 HOH A 13 125 184 HOH HOH . P 3 HOH B 1 202 3 HOH HOH . P 3 HOH B 2 203 5 HOH HOH . P 3 HOH B 3 204 26 HOH HOH . P 3 HOH B 4 205 44 HOH HOH . P 3 HOH B 5 206 49 HOH HOH . P 3 HOH B 6 207 83 HOH HOH . P 3 HOH B 7 208 168 HOH HOH . P 3 HOH B 8 209 172 HOH HOH . P 3 HOH B 9 210 173 HOH HOH . P 3 HOH B 10 211 180 HOH HOH . P 3 HOH B 11 212 181 HOH HOH . Q 3 HOH C 1 112 11 HOH HOH . Q 3 HOH C 2 113 46 HOH HOH . Q 3 HOH C 3 114 62 HOH HOH . Q 3 HOH C 4 115 105 HOH HOH . Q 3 HOH C 5 116 182 HOH HOH . R 3 HOH D 1 112 128 HOH HOH . R 3 HOH D 2 113 113 HOH HOH . R 3 HOH D 3 114 120 HOH HOH . R 3 HOH D 4 115 134 HOH HOH . R 3 HOH D 5 116 166 HOH HOH . R 3 HOH D 6 117 199 HOH HOH . R 3 HOH D 7 118 200 HOH HOH . S 3 HOH E 1 112 4 HOH HOH . S 3 HOH E 2 113 56 HOH HOH . S 3 HOH E 3 114 60 HOH HOH . S 3 HOH E 4 115 95 HOH HOH . S 3 HOH E 5 116 98 HOH HOH . S 3 HOH E 6 117 115 HOH HOH . S 3 HOH E 7 118 130 HOH HOH . S 3 HOH E 8 119 170 HOH HOH . S 3 HOH E 9 120 188 HOH HOH . S 3 HOH E 10 121 189 HOH HOH . S 3 HOH E 11 122 197 HOH HOH . T 3 HOH F 1 112 14 HOH HOH . T 3 HOH F 2 113 20 HOH HOH . T 3 HOH F 3 114 33 HOH HOH . T 3 HOH F 4 115 47 HOH HOH . T 3 HOH F 5 116 61 HOH HOH . T 3 HOH F 6 117 106 HOH HOH . T 3 HOH F 7 118 151 HOH HOH . T 3 HOH F 8 119 178 HOH HOH . U 3 HOH G 1 204 10 HOH HOH . U 3 HOH G 2 205 21 HOH HOH . U 3 HOH G 3 206 32 HOH HOH . U 3 HOH G 4 207 68 HOH HOH . U 3 HOH G 5 208 78 HOH HOH . U 3 HOH G 6 209 126 HOH HOH . U 3 HOH G 7 210 146 HOH HOH . U 3 HOH G 8 211 147 HOH HOH . U 3 HOH G 9 212 190 HOH HOH . V 3 HOH H 1 112 27 HOH HOH . V 3 HOH H 2 113 39 HOH HOH . V 3 HOH H 3 114 50 HOH HOH . V 3 HOH H 4 115 55 HOH HOH . V 3 HOH H 5 116 66 HOH HOH . V 3 HOH H 6 117 70 HOH HOH . V 3 HOH H 7 118 122 HOH HOH . V 3 HOH H 8 119 125 HOH HOH . V 3 HOH H 9 120 193 HOH HOH . V 3 HOH H 10 121 198 HOH HOH . W 3 HOH I 1 112 37 HOH HOH . W 3 HOH I 2 113 96 HOH HOH . W 3 HOH I 3 114 124 HOH HOH . W 3 HOH I 4 115 186 HOH HOH . X 3 HOH J 1 112 16 HOH HOH . X 3 HOH J 2 113 41 HOH HOH . X 3 HOH J 3 114 67 HOH HOH . X 3 HOH J 4 115 100 HOH HOH . X 3 HOH J 5 116 141 HOH HOH . X 3 HOH J 6 117 167 HOH HOH . X 3 HOH J 7 118 179 HOH HOH . X 3 HOH J 8 119 185 HOH HOH . X 3 HOH J 9 120 187 HOH HOH . X 3 HOH J 10 121 191 HOH HOH . X 3 HOH J 11 122 192 HOH HOH . X 3 HOH J 12 123 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 2 21.374 96.245 30.295 1 37.75 ? C1 GOL 202 G 1 HETATM 2 O O1 GOL . . . N 2 21.857 97.524 29.908 1 41.55 ? O1 GOL 202 G 1 HETATM 3 C C2 GOL . . . N 2 22.503 95.278 29.988 1 40.78 ? C2 GOL 202 G 1 HETATM 4 O O2 GOL . . . N 2 23.301 95.423 31.119 1 39.5 ? O2 GOL 202 G 1 HETATM 5 C C3 GOL . . . N 2 23.201 95.76 28.708 1 43.2 ? C3 GOL 202 G 1 HETATM 6 O O3 GOL . . . N 2 22.195 96.329 27.832 1 50.01 ? O3 GOL 202 G 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #