data_2QXX # _model_server_result.job_id sRW3abcW6PGeRvlH10nECA _model_server_result.datetime_utc '2025-04-01 09:30:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qxx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":203}' # _entry.id 2QXX # _exptl.entry_id 2QXX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 70.75 _cell.angle_beta 70.75 _cell.angle_gamma 70.75 _cell.entry_id 2QXX _cell.length_a 82.64 _cell.length_b 82.64 _cell.length_c 82.64 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QXX _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'R 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1,2,3 B,F,G,H,I,K 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 z,x,y 0.329691 0.234083 0.914609 0.944089 -0.081745 -0.319396 0 0.968774 -0.247945 0 0 0 3 'crystal symmetry operation' 3_555 y,z,x 0.329691 0.944089 0 0.234083 -0.081745 0.968774 0.914609 -0.319396 -0.247945 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D O2B TTP . A TTP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 D O1A TTP . A TTP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc3 D O3G TTP . A TTP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc4 C MG MG . A MG 202 1_555 J O HOH . A HOH 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc5 C MG MG . A MG 202 1_555 J O HOH . A HOH 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc6 G O1A TTP . B TTP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc7 G O3G TTP . B TTP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc8 G O2B TTP . B TTP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc9 F MG MG . B MG 202 1_555 K O HOH . B HOH 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc10 F MG MG . B MG 202 1_555 K O HOH . B HOH 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc11 F MG MG . B MG 202 1_555 K O HOH . B HOH 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 2QXX _atom_sites.fract_transf_matrix[1][1] 0.012101 _atom_sites.fract_transf_matrix[1][2] -0.004226 _atom_sites.fract_transf_matrix[1][3] -0.00328 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012817 _atom_sites.fract_transf_matrix[2][3] -0.00328 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 202 202 MG MG . D 3 TTP A 1 201 201 TTP TTP . E 4 1PE A 1 203 1 1PE 1PE . F 2 MG B 1 202 202 MG MG . G 3 TTP B 1 201 201 TTP TTP . H 4 1PE B 1 203 2 1PE 1PE . I 4 1PE B 1 204 3 1PE 1PE . J 5 HOH A 1 204 1 HOH HOH . J 5 HOH A 2 205 3 HOH HOH . J 5 HOH A 3 206 5 HOH HOH . J 5 HOH A 4 207 7 HOH HOH . J 5 HOH A 5 208 9 HOH HOH . J 5 HOH A 6 209 10 HOH HOH . J 5 HOH A 7 210 11 HOH HOH . J 5 HOH A 8 211 14 HOH HOH . J 5 HOH A 9 212 15 HOH HOH . J 5 HOH A 10 213 18 HOH HOH . J 5 HOH A 11 214 20 HOH HOH . J 5 HOH A 12 215 21 HOH HOH . J 5 HOH A 13 216 25 HOH HOH . J 5 HOH A 14 217 30 HOH HOH . J 5 HOH A 15 218 31 HOH HOH . J 5 HOH A 16 219 32 HOH HOH . J 5 HOH A 17 220 33 HOH HOH . J 5 HOH A 18 221 37 HOH HOH . J 5 HOH A 19 222 38 HOH HOH . J 5 HOH A 20 223 39 HOH HOH . J 5 HOH A 21 224 41 HOH HOH . J 5 HOH A 22 225 42 HOH HOH . J 5 HOH A 23 226 44 HOH HOH . J 5 HOH A 24 227 45 HOH HOH . J 5 HOH A 25 228 46 HOH HOH . J 5 HOH A 26 229 48 HOH HOH . J 5 HOH A 27 230 49 HOH HOH . J 5 HOH A 28 231 51 HOH HOH . J 5 HOH A 29 232 52 HOH HOH . J 5 HOH A 30 233 53 HOH HOH . J 5 HOH A 31 234 56 HOH HOH . J 5 HOH A 32 235 58 HOH HOH . J 5 HOH A 33 236 59 HOH HOH . J 5 HOH A 34 237 60 HOH HOH . J 5 HOH A 35 238 61 HOH HOH . J 5 HOH A 36 239 65 HOH HOH . J 5 HOH A 37 240 66 HOH HOH . J 5 HOH A 38 241 69 HOH HOH . J 5 HOH A 39 242 70 HOH HOH . J 5 HOH A 40 243 72 HOH HOH . J 5 HOH A 41 244 75 HOH HOH . J 5 HOH A 42 245 76 HOH HOH . J 5 HOH A 43 246 77 HOH HOH . J 5 HOH A 44 247 79 HOH HOH . J 5 HOH A 45 248 83 HOH HOH . J 5 HOH A 46 249 87 HOH HOH . J 5 HOH A 47 250 88 HOH HOH . J 5 HOH A 48 251 89 HOH HOH . J 5 HOH A 49 252 91 HOH HOH . J 5 HOH A 50 253 97 HOH HOH . J 5 HOH A 51 254 100 HOH HOH . J 5 HOH A 52 255 101 HOH HOH . J 5 HOH A 53 256 103 HOH HOH . J 5 HOH A 54 257 104 HOH HOH . J 5 HOH A 55 258 105 HOH HOH . J 5 HOH A 56 259 106 HOH HOH . J 5 HOH A 57 260 108 HOH HOH . J 5 HOH A 58 261 109 HOH HOH . J 5 HOH A 59 262 110 HOH HOH . J 5 HOH A 60 263 111 HOH HOH . J 5 HOH A 61 264 112 HOH HOH . J 5 HOH A 62 265 116 HOH HOH . J 5 HOH A 63 266 118 HOH HOH . J 5 HOH A 64 267 122 HOH HOH . J 5 HOH A 65 268 125 HOH HOH . J 5 HOH A 66 269 127 HOH HOH . J 5 HOH A 67 270 128 HOH HOH . J 5 HOH A 68 271 129 HOH HOH . J 5 HOH A 69 272 132 HOH HOH . J 5 HOH A 70 273 133 HOH HOH . J 5 HOH A 71 274 134 HOH HOH . J 5 HOH A 72 275 135 HOH HOH . J 5 HOH A 73 276 137 HOH HOH . J 5 HOH A 74 277 142 HOH HOH . J 5 HOH A 75 278 144 HOH HOH . J 5 HOH A 76 279 145 HOH HOH . J 5 HOH A 77 280 147 HOH HOH . J 5 HOH A 78 281 149 HOH HOH . J 5 HOH A 79 282 151 HOH HOH . J 5 HOH A 80 283 152 HOH HOH . J 5 HOH A 81 284 153 HOH HOH . J 5 HOH A 82 285 159 HOH HOH . J 5 HOH A 83 286 160 HOH HOH . J 5 HOH A 84 287 162 HOH HOH . J 5 HOH A 85 288 163 HOH HOH . J 5 HOH A 86 289 164 HOH HOH . J 5 HOH A 87 290 166 HOH HOH . J 5 HOH A 88 291 12 HOH HOH . K 5 HOH B 1 205 2 HOH HOH . K 5 HOH B 2 206 4 HOH HOH . K 5 HOH B 3 207 6 HOH HOH . K 5 HOH B 4 208 8 HOH HOH . K 5 HOH B 5 210 13 HOH HOH . K 5 HOH B 6 211 16 HOH HOH . K 5 HOH B 7 212 17 HOH HOH . K 5 HOH B 8 213 19 HOH HOH . K 5 HOH B 9 214 22 HOH HOH . K 5 HOH B 10 215 23 HOH HOH . K 5 HOH B 11 216 24 HOH HOH . K 5 HOH B 12 217 26 HOH HOH . K 5 HOH B 13 218 27 HOH HOH . K 5 HOH B 14 219 28 HOH HOH . K 5 HOH B 15 220 29 HOH HOH . K 5 HOH B 16 221 34 HOH HOH . K 5 HOH B 17 222 35 HOH HOH . K 5 HOH B 18 223 36 HOH HOH . K 5 HOH B 19 224 40 HOH HOH . K 5 HOH B 20 225 43 HOH HOH . K 5 HOH B 21 226 47 HOH HOH . K 5 HOH B 22 227 50 HOH HOH . K 5 HOH B 23 228 54 HOH HOH . K 5 HOH B 24 229 55 HOH HOH . K 5 HOH B 25 230 57 HOH HOH . K 5 HOH B 26 231 62 HOH HOH . K 5 HOH B 27 232 63 HOH HOH . K 5 HOH B 28 233 64 HOH HOH . K 5 HOH B 29 234 67 HOH HOH . K 5 HOH B 30 235 68 HOH HOH . K 5 HOH B 31 236 71 HOH HOH . K 5 HOH B 32 237 73 HOH HOH . K 5 HOH B 33 238 74 HOH HOH . K 5 HOH B 34 239 78 HOH HOH . K 5 HOH B 35 240 80 HOH HOH . K 5 HOH B 36 241 81 HOH HOH . K 5 HOH B 37 242 82 HOH HOH . K 5 HOH B 38 243 84 HOH HOH . K 5 HOH B 39 244 85 HOH HOH . K 5 HOH B 40 245 86 HOH HOH . K 5 HOH B 41 246 90 HOH HOH . K 5 HOH B 42 247 92 HOH HOH . K 5 HOH B 43 248 93 HOH HOH . K 5 HOH B 44 249 94 HOH HOH . K 5 HOH B 45 250 95 HOH HOH . K 5 HOH B 46 251 96 HOH HOH . K 5 HOH B 47 252 98 HOH HOH . K 5 HOH B 48 253 99 HOH HOH . K 5 HOH B 49 254 102 HOH HOH . K 5 HOH B 50 255 107 HOH HOH . K 5 HOH B 51 256 113 HOH HOH . K 5 HOH B 52 257 114 HOH HOH . K 5 HOH B 53 258 115 HOH HOH . K 5 HOH B 54 259 117 HOH HOH . K 5 HOH B 55 260 119 HOH HOH . K 5 HOH B 56 261 120 HOH HOH . K 5 HOH B 57 262 121 HOH HOH . K 5 HOH B 58 263 123 HOH HOH . K 5 HOH B 59 264 124 HOH HOH . K 5 HOH B 60 265 126 HOH HOH . K 5 HOH B 61 266 130 HOH HOH . K 5 HOH B 62 267 131 HOH HOH . K 5 HOH B 63 268 136 HOH HOH . K 5 HOH B 64 269 138 HOH HOH . K 5 HOH B 65 270 139 HOH HOH . K 5 HOH B 66 271 140 HOH HOH . K 5 HOH B 67 272 141 HOH HOH . K 5 HOH B 68 273 143 HOH HOH . K 5 HOH B 69 274 146 HOH HOH . K 5 HOH B 70 275 148 HOH HOH . K 5 HOH B 71 276 150 HOH HOH . K 5 HOH B 72 277 154 HOH HOH . K 5 HOH B 73 278 155 HOH HOH . K 5 HOH B 74 279 156 HOH HOH . K 5 HOH B 75 280 157 HOH HOH . K 5 HOH B 76 281 158 HOH HOH . K 5 HOH B 77 282 161 HOH HOH . K 5 HOH B 78 283 165 HOH HOH . K 5 HOH B 79 284 167 HOH HOH . K 5 HOH B 80 285 168 HOH HOH . K 5 HOH B 81 286 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . H 4 -48.697 -63.733 -29.108 1 39.64 ? OH2 1PE 203 B 1 HETATM 2 C C12 1PE . . . H 4 -49.794 -63.744 -28.182 1 39.28 ? C12 1PE 203 B 1 HETATM 3 C C22 1PE . . . H 4 -51.072 -63.351 -28.912 1 38.88 ? C22 1PE 203 B 1 HETATM 4 O OH3 1PE . . . H 4 -50.734 -62.42 -29.938 1 39.52 ? OH3 1PE 203 B 1 HETATM 5 C C13 1PE . . . H 4 -51.189 -62.366 -32.317 1 37.78 ? C13 1PE 203 B 1 HETATM 6 C C23 1PE . . . H 4 -51.76 -62.205 -30.91 1 38.13 ? C23 1PE 203 B 1 HETATM 7 O OH4 1PE . . . H 4 -52.001 -61.666 -33.261 1 38.6 ? OH4 1PE 203 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 7 #