data_2QY0
#
_model_server_result.job_id            Lh58EgmyMXCozGGazKxB3Q 
_model_server_result.datetime_utc      '2024-11-22 08:20:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qy0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":803}' 
#
_entry.id    2QY0 
#
_exptl.entry_id    2QY0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2QY0 
_cell.length_a            74.541 
_cell.length_b            92.416 
_cell.length_c            162.848 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QY0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 292 1_555 A SG CYS 54 A CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 A SG CYS 34 A CYS 321 1_555 A SG CYS 67 A CYS 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 A SG CYS 72 A CYS 359 1_555 A SG CYS 125 A CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 A SG CYS 102 A CYS 389 1_555 A SG CYS 143 A CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf5 A SG CYS 147 A CYS 434 1_555 B SG CYS 114 B CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
disulf ? disulf6 B SG CYS 157 B CYS 603 1_555 B SG CYS 176 B CYS 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf7 B SG CYS 187 B CYS 633 1_555 B SG CYS 217 B CYS 663 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
disulf ? disulf8 C SG CYS 5 C CYS 292 1_555 C SG CYS 54 C CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf9 C SG CYS 34 C CYS 321 1_555 C SG CYS 67 C CYS 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf10 C SG CYS 72 C CYS 359 1_555 C SG CYS 125 C CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf11 C SG CYS 102 C CYS 389 1_555 C SG CYS 143 C CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf12 C SG CYS 147 C CYS 434 1_555 D SG CYS 114 D CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
disulf ? disulf13 D SG CYS 157 D CYS 603 1_555 D SG CYS 176 D CYS 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
disulf ? disulf14 D SG CYS 187 D CYS 633 1_555 D SG CYS 217 D CYS 663 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2QY0 
_atom_sites.fract_transf_matrix[1][1]    0.013415 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010821 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006141 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GOL A 1 806 806 GOL GOL . 
F 3 GOL B 1 801 801 GOL GOL . 
G 3 GOL B 1 804 804 GOL GOL . 
H 3 GOL C 1 802 802 GOL GOL . 
I 3 GOL C 1 805 805 GOL GOL . 
J 3 GOL D 1 800 800 GOL GOL . 
K 3 GOL D 1 803 803 GOL GOL . 
L 4 HOH A 1 19 19 HOH HOH . 
L 4 HOH A 2 27 27 HOH HOH . 
L 4 HOH A 3 32 32 HOH HOH . 
L 4 HOH A 4 35 35 HOH HOH . 
L 4 HOH A 5 42 42 HOH HOH . 
L 4 HOH A 6 46 46 HOH HOH . 
L 4 HOH A 7 48 48 HOH HOH . 
L 4 HOH A 8 50 50 HOH HOH . 
L 4 HOH A 9 52 52 HOH HOH . 
L 4 HOH A 10 58 58 HOH HOH . 
L 4 HOH A 11 61 61 HOH HOH . 
L 4 HOH A 12 65 65 HOH HOH . 
L 4 HOH A 13 68 68 HOH HOH . 
L 4 HOH A 14 71 71 HOH HOH . 
L 4 HOH A 15 83 83 HOH HOH . 
L 4 HOH A 16 100 100 HOH HOH . 
L 4 HOH A 17 104 104 HOH HOH . 
L 4 HOH A 18 111 111 HOH HOH . 
L 4 HOH A 19 132 132 HOH HOH . 
L 4 HOH A 20 159 159 HOH HOH . 
M 4 HOH B 1 2 2 HOH HOH . 
M 4 HOH B 2 3 3 HOH HOH . 
M 4 HOH B 3 6 6 HOH HOH . 
M 4 HOH B 4 8 8 HOH HOH . 
M 4 HOH B 5 11 11 HOH HOH . 
M 4 HOH B 6 15 15 HOH HOH . 
M 4 HOH B 7 17 17 HOH HOH . 
M 4 HOH B 8 18 18 HOH HOH . 
M 4 HOH B 9 20 20 HOH HOH . 
M 4 HOH B 10 23 23 HOH HOH . 
M 4 HOH B 11 24 24 HOH HOH . 
M 4 HOH B 12 29 29 HOH HOH . 
M 4 HOH B 13 30 30 HOH HOH . 
M 4 HOH B 14 34 34 HOH HOH . 
M 4 HOH B 15 38 38 HOH HOH . 
M 4 HOH B 16 40 40 HOH HOH . 
M 4 HOH B 17 41 41 HOH HOH . 
M 4 HOH B 18 47 47 HOH HOH . 
M 4 HOH B 19 49 49 HOH HOH . 
M 4 HOH B 20 55 55 HOH HOH . 
M 4 HOH B 21 56 56 HOH HOH . 
M 4 HOH B 22 60 60 HOH HOH . 
M 4 HOH B 23 67 67 HOH HOH . 
M 4 HOH B 24 70 70 HOH HOH . 
M 4 HOH B 25 72 72 HOH HOH . 
M 4 HOH B 26 73 73 HOH HOH . 
M 4 HOH B 27 74 74 HOH HOH . 
M 4 HOH B 28 75 75 HOH HOH . 
M 4 HOH B 29 77 77 HOH HOH . 
M 4 HOH B 30 78 78 HOH HOH . 
M 4 HOH B 31 79 79 HOH HOH . 
M 4 HOH B 32 82 82 HOH HOH . 
M 4 HOH B 33 86 86 HOH HOH . 
M 4 HOH B 34 90 90 HOH HOH . 
M 4 HOH B 35 95 95 HOH HOH . 
M 4 HOH B 36 96 96 HOH HOH . 
M 4 HOH B 37 99 99 HOH HOH . 
M 4 HOH B 38 103 103 HOH HOH . 
M 4 HOH B 39 105 105 HOH HOH . 
M 4 HOH B 40 110 110 HOH HOH . 
M 4 HOH B 41 112 112 HOH HOH . 
M 4 HOH B 42 114 114 HOH HOH . 
M 4 HOH B 43 115 115 HOH HOH . 
M 4 HOH B 44 116 116 HOH HOH . 
M 4 HOH B 45 117 117 HOH HOH . 
M 4 HOH B 46 118 118 HOH HOH . 
M 4 HOH B 47 122 122 HOH HOH . 
M 4 HOH B 48 123 123 HOH HOH . 
M 4 HOH B 49 133 133 HOH HOH . 
M 4 HOH B 50 136 136 HOH HOH . 
M 4 HOH B 51 137 137 HOH HOH . 
M 4 HOH B 52 138 138 HOH HOH . 
M 4 HOH B 53 139 139 HOH HOH . 
M 4 HOH B 54 140 140 HOH HOH . 
M 4 HOH B 55 141 141 HOH HOH . 
M 4 HOH B 56 142 142 HOH HOH . 
M 4 HOH B 57 143 143 HOH HOH . 
M 4 HOH B 58 150 150 HOH HOH . 
M 4 HOH B 59 153 153 HOH HOH . 
M 4 HOH B 60 154 154 HOH HOH . 
M 4 HOH B 61 157 157 HOH HOH . 
N 4 HOH C 1 31 31 HOH HOH . 
N 4 HOH C 2 33 33 HOH HOH . 
N 4 HOH C 3 43 43 HOH HOH . 
N 4 HOH C 4 53 53 HOH HOH . 
N 4 HOH C 5 54 54 HOH HOH . 
N 4 HOH C 6 57 57 HOH HOH . 
N 4 HOH C 7 62 62 HOH HOH . 
N 4 HOH C 8 80 80 HOH HOH . 
N 4 HOH C 9 84 84 HOH HOH . 
N 4 HOH C 10 88 88 HOH HOH . 
N 4 HOH C 11 89 89 HOH HOH . 
N 4 HOH C 12 92 92 HOH HOH . 
N 4 HOH C 13 93 93 HOH HOH . 
N 4 HOH C 14 97 97 HOH HOH . 
N 4 HOH C 15 101 101 HOH HOH . 
N 4 HOH C 16 102 102 HOH HOH . 
N 4 HOH C 17 109 109 HOH HOH . 
N 4 HOH C 18 119 119 HOH HOH . 
N 4 HOH C 19 120 120 HOH HOH . 
N 4 HOH C 20 127 127 HOH HOH . 
N 4 HOH C 21 128 128 HOH HOH . 
N 4 HOH C 22 144 144 HOH HOH . 
N 4 HOH C 23 145 145 HOH HOH . 
N 4 HOH C 24 155 155 HOH HOH . 
N 4 HOH C 25 156 156 HOH HOH . 
O 4 HOH D 1 1 1 HOH HOH . 
O 4 HOH D 2 4 4 HOH HOH . 
O 4 HOH D 3 5 5 HOH HOH . 
O 4 HOH D 4 7 7 HOH HOH . 
O 4 HOH D 5 9 9 HOH HOH . 
O 4 HOH D 6 10 10 HOH HOH . 
O 4 HOH D 7 12 12 HOH HOH . 
O 4 HOH D 8 13 13 HOH HOH . 
O 4 HOH D 9 14 14 HOH HOH . 
O 4 HOH D 10 16 16 HOH HOH . 
O 4 HOH D 11 21 21 HOH HOH . 
O 4 HOH D 12 22 22 HOH HOH . 
O 4 HOH D 13 25 25 HOH HOH . 
O 4 HOH D 14 26 26 HOH HOH . 
O 4 HOH D 15 28 28 HOH HOH . 
O 4 HOH D 16 36 36 HOH HOH . 
O 4 HOH D 17 37 37 HOH HOH . 
O 4 HOH D 18 39 39 HOH HOH . 
O 4 HOH D 19 44 44 HOH HOH . 
O 4 HOH D 20 45 45 HOH HOH . 
O 4 HOH D 21 51 51 HOH HOH . 
O 4 HOH D 22 59 59 HOH HOH . 
O 4 HOH D 23 63 63 HOH HOH . 
O 4 HOH D 24 64 64 HOH HOH . 
O 4 HOH D 25 66 66 HOH HOH . 
O 4 HOH D 26 69 69 HOH HOH . 
O 4 HOH D 27 76 76 HOH HOH . 
O 4 HOH D 28 81 81 HOH HOH . 
O 4 HOH D 29 85 85 HOH HOH . 
O 4 HOH D 30 87 87 HOH HOH . 
O 4 HOH D 31 91 91 HOH HOH . 
O 4 HOH D 32 94 94 HOH HOH . 
O 4 HOH D 33 98 98 HOH HOH . 
O 4 HOH D 34 106 106 HOH HOH . 
O 4 HOH D 35 107 107 HOH HOH . 
O 4 HOH D 36 108 108 HOH HOH . 
O 4 HOH D 37 113 113 HOH HOH . 
O 4 HOH D 38 121 121 HOH HOH . 
O 4 HOH D 39 124 124 HOH HOH . 
O 4 HOH D 40 125 125 HOH HOH . 
O 4 HOH D 41 126 126 HOH HOH . 
O 4 HOH D 42 129 129 HOH HOH . 
O 4 HOH D 43 130 130 HOH HOH . 
O 4 HOH D 44 131 131 HOH HOH . 
O 4 HOH D 45 134 134 HOH HOH . 
O 4 HOH D 46 135 135 HOH HOH . 
O 4 HOH D 47 146 146 HOH HOH . 
O 4 HOH D 48 147 147 HOH HOH . 
O 4 HOH D 49 148 148 HOH HOH . 
O 4 HOH D 50 149 149 HOH HOH . 
O 4 HOH D 51 151 151 HOH HOH . 
O 4 HOH D 52 152 152 HOH HOH . 
O 4 HOH D 53 158 158 HOH HOH . 
O 4 HOH D 54 160 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 3 -12.199 0.14 73.835 0.8 24.29 ? C1 GOL 803 D 1 
HETATM 2 O O1 GOL . . . K 3 -13.56 -0.177 73.912 0.8 25.69 ? O1 GOL 803 D 1 
HETATM 3 C C2 GOL . . . K 3 -12.157 1.447 73.062 0.8 23.72 ? C2 GOL 803 D 1 
HETATM 4 O O2 GOL . . . K 3 -10.808 1.745 72.809 0.8 25.04 ? O2 GOL 803 D 1 
HETATM 5 C C3 GOL . . . K 3 -12.88 1.263 71.753 0.8 23.38 ? C3 GOL 803 D 1 
HETATM 6 O O3 GOL . . . K 3 -12.348 2.149 70.785 0.8 23.83 ? O3 GOL 803 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           250 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#