data_2QYC
#
_model_server_result.job_id            AJ2_DRmEpQDuLz2uxJx6Vw 
_model_server_result.datetime_utc      '2025-06-23 03:26:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qyc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":104}' 
#
_entry.id    2QYC 
#
_exptl.entry_id    2QYC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2QYC 
_cell.length_a            50.82 
_cell.length_b            50.82 
_cell.length_c            142.17 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QYC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H 1 1 
A,B,C,D,E,F,G,H 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 88.022822 47.39 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 36 A CYS 35 1_555 A SG CYS 75 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
disulf ? disulf2 B SG CYS 36 B CYS 35 1_555 B SG CYS 75 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MSE 2 A MSE 1 1_555 A N THR 3 A THR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 A C THR 3 A THR 2 1_555 A N MSE 4 A MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale4 A C MSE 4 A MSE 3 1_555 A N PHE 5 A PHE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale5 A C VAL 9 A VAL 8 1_555 A N MSE 10 A MSE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale6 A C MSE 10 A MSE 9 1_555 A N MSE 11 A MSE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale7 A C MSE 11 A MSE 10 1_555 A N GLU 12 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale8 A C ARG 31 A ARG 30 1_555 A N MSE 32 A MSE 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale9 A C MSE 32 A MSE 31 1_555 A N LYS 33 A LYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale10 A C ALA 80 A ALA 79 1_555 A N MSE 81 A MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale11 A C MSE 81 A MSE 80 1_555 A N LYS 82 A LYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale12 A C PHE 84 A PHE 83 1_555 A N MSE 85 A MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale13 A C MSE 85 A MSE 84 1_555 A N GLY 86 A GLY 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale14 B C GLY 1 B GLY 0 1_555 B N MSE 2 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale15 B C MSE 2 B MSE 1 1_555 B N THR 3 B THR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale16 B C THR 3 B THR 2 1_555 B N MSE 4 B MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale17 B C MSE 4 B MSE 3 1_555 B N PHE 5 B PHE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale18 B C VAL 9 B VAL 8 1_555 B N MSE 10 B MSE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale19 B C MSE 10 B MSE 9 1_555 B N MSE 11 B MSE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale20 B C MSE 11 B MSE 10 1_555 B N GLU 12 B GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale21 B C ARG 31 B ARG 30 1_555 B N MSE 32 B MSE 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale22 B C MSE 32 B MSE 31 1_555 B N LYS 33 B LYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale23 B C ALA 80 B ALA 79 1_555 B N MSE 81 B MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale24 B C MSE 81 B MSE 80 1_555 B N LYS 82 B LYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale25 B C PHE 84 B PHE 83 1_555 B N MSE 85 B MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale26 B C MSE 85 B MSE 84 1_555 B N GLY 86 B GLY 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     2QYC 
_atom_sites.fract_transf_matrix[1][1]    0.01968 
_atom_sites.fract_transf_matrix[1][2]    0.01136 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02272 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00703 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 103 2 EDO EDO . 
D 2 EDO A 1 104 3 EDO EDO . 
E 3 CL B 1 103 1 CL CL . 
F 4 ACT B 1 104 4 ACT ACT . 
G 5 HOH A 1 105 5 HOH HOH . 
G 5 HOH A 2 106 13 HOH HOH . 
G 5 HOH A 3 107 14 HOH HOH . 
G 5 HOH A 4 108 16 HOH HOH . 
G 5 HOH A 5 109 17 HOH HOH . 
G 5 HOH A 6 110 18 HOH HOH . 
G 5 HOH A 7 111 19 HOH HOH . 
G 5 HOH A 8 112 20 HOH HOH . 
G 5 HOH A 9 113 23 HOH HOH . 
G 5 HOH A 10 114 26 HOH HOH . 
G 5 HOH A 11 115 27 HOH HOH . 
G 5 HOH A 12 116 30 HOH HOH . 
G 5 HOH A 13 117 32 HOH HOH . 
G 5 HOH A 14 118 36 HOH HOH . 
G 5 HOH A 15 119 41 HOH HOH . 
G 5 HOH A 16 120 42 HOH HOH . 
G 5 HOH A 17 121 43 HOH HOH . 
G 5 HOH A 18 122 44 HOH HOH . 
G 5 HOH A 19 123 47 HOH HOH . 
G 5 HOH A 20 124 54 HOH HOH . 
G 5 HOH A 21 125 56 HOH HOH . 
G 5 HOH A 22 126 57 HOH HOH . 
G 5 HOH A 23 127 58 HOH HOH . 
G 5 HOH A 24 128 60 HOH HOH . 
G 5 HOH A 25 129 61 HOH HOH . 
G 5 HOH A 26 130 65 HOH HOH . 
G 5 HOH A 27 131 67 HOH HOH . 
G 5 HOH A 28 132 69 HOH HOH . 
G 5 HOH A 29 133 71 HOH HOH . 
G 5 HOH A 30 134 74 HOH HOH . 
G 5 HOH A 31 135 76 HOH HOH . 
G 5 HOH A 32 136 79 HOH HOH . 
G 5 HOH A 33 137 81 HOH HOH . 
G 5 HOH A 34 138 82 HOH HOH . 
G 5 HOH A 35 139 83 HOH HOH . 
G 5 HOH A 36 140 84 HOH HOH . 
G 5 HOH A 37 141 85 HOH HOH . 
G 5 HOH A 38 142 87 HOH HOH . 
G 5 HOH A 39 143 91 HOH HOH . 
G 5 HOH A 40 144 92 HOH HOH . 
G 5 HOH A 41 145 95 HOH HOH . 
G 5 HOH A 42 146 98 HOH HOH . 
G 5 HOH A 43 147 99 HOH HOH . 
G 5 HOH A 44 148 101 HOH HOH . 
G 5 HOH A 45 149 103 HOH HOH . 
G 5 HOH A 46 150 104 HOH HOH . 
G 5 HOH A 47 151 106 HOH HOH . 
G 5 HOH A 48 152 115 HOH HOH . 
G 5 HOH A 49 153 116 HOH HOH . 
G 5 HOH A 50 154 118 HOH HOH . 
G 5 HOH A 51 155 120 HOH HOH . 
G 5 HOH A 52 156 121 HOH HOH . 
G 5 HOH A 53 157 122 HOH HOH . 
G 5 HOH A 54 158 123 HOH HOH . 
G 5 HOH A 55 159 124 HOH HOH . 
H 5 HOH B 1 105 6 HOH HOH . 
H 5 HOH B 2 106 7 HOH HOH . 
H 5 HOH B 3 107 8 HOH HOH . 
H 5 HOH B 4 108 9 HOH HOH . 
H 5 HOH B 5 109 10 HOH HOH . 
H 5 HOH B 6 110 11 HOH HOH . 
H 5 HOH B 7 111 12 HOH HOH . 
H 5 HOH B 8 112 15 HOH HOH . 
H 5 HOH B 9 113 21 HOH HOH . 
H 5 HOH B 10 114 22 HOH HOH . 
H 5 HOH B 11 115 24 HOH HOH . 
H 5 HOH B 12 116 25 HOH HOH . 
H 5 HOH B 13 117 28 HOH HOH . 
H 5 HOH B 14 118 29 HOH HOH . 
H 5 HOH B 15 119 31 HOH HOH . 
H 5 HOH B 16 120 33 HOH HOH . 
H 5 HOH B 17 121 34 HOH HOH . 
H 5 HOH B 18 122 35 HOH HOH . 
H 5 HOH B 19 123 37 HOH HOH . 
H 5 HOH B 20 124 38 HOH HOH . 
H 5 HOH B 21 125 39 HOH HOH . 
H 5 HOH B 22 126 40 HOH HOH . 
H 5 HOH B 23 127 45 HOH HOH . 
H 5 HOH B 24 128 46 HOH HOH . 
H 5 HOH B 25 129 48 HOH HOH . 
H 5 HOH B 26 130 49 HOH HOH . 
H 5 HOH B 27 131 50 HOH HOH . 
H 5 HOH B 28 132 51 HOH HOH . 
H 5 HOH B 29 133 52 HOH HOH . 
H 5 HOH B 30 134 53 HOH HOH . 
H 5 HOH B 31 135 55 HOH HOH . 
H 5 HOH B 32 136 59 HOH HOH . 
H 5 HOH B 33 137 62 HOH HOH . 
H 5 HOH B 34 138 63 HOH HOH . 
H 5 HOH B 35 139 64 HOH HOH . 
H 5 HOH B 36 140 66 HOH HOH . 
H 5 HOH B 37 141 68 HOH HOH . 
H 5 HOH B 38 142 70 HOH HOH . 
H 5 HOH B 39 143 72 HOH HOH . 
H 5 HOH B 40 144 73 HOH HOH . 
H 5 HOH B 41 145 75 HOH HOH . 
H 5 HOH B 42 146 77 HOH HOH . 
H 5 HOH B 43 147 78 HOH HOH . 
H 5 HOH B 44 148 80 HOH HOH . 
H 5 HOH B 45 149 86 HOH HOH . 
H 5 HOH B 46 150 88 HOH HOH . 
H 5 HOH B 47 151 89 HOH HOH . 
H 5 HOH B 48 152 90 HOH HOH . 
H 5 HOH B 49 153 93 HOH HOH . 
H 5 HOH B 50 154 94 HOH HOH . 
H 5 HOH B 51 155 96 HOH HOH . 
H 5 HOH B 52 156 97 HOH HOH . 
H 5 HOH B 53 157 100 HOH HOH . 
H 5 HOH B 54 158 102 HOH HOH . 
H 5 HOH B 55 159 105 HOH HOH . 
H 5 HOH B 56 160 107 HOH HOH . 
H 5 HOH B 57 161 108 HOH HOH . 
H 5 HOH B 58 162 109 HOH HOH . 
H 5 HOH B 59 163 110 HOH HOH . 
H 5 HOH B 60 164 111 HOH HOH . 
H 5 HOH B 61 165 112 HOH HOH . 
H 5 HOH B 62 166 113 HOH HOH . 
H 5 HOH B 63 167 114 HOH HOH . 
H 5 HOH B 64 168 117 HOH HOH . 
H 5 HOH B 65 169 119 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . F 4 8.934 43.934 23.787 0.5 42.18 ? C ACT 104 B 1 
HETATM 2 O O ACT . . . F 4 10.158 43.939 24.041 0.5 40.02 ? O ACT 104 B 1 
HETATM 3 O OXT ACT . . . F 4 8.61 43.67 22.596 0.5 40.43 ? OXT ACT 104 B 1 
HETATM 4 C CH3 ACT . . . F 4 7.91 44.218 24.856 0.5 39.34 ? CH3 ACT 104 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#