data_2QYL # _model_server_result.job_id 5ZsLtaMUk9kxibDHDxH3OA _model_server_result.datetime_utc '2024-10-15 18:27:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qyl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2QYL # _exptl.entry_id 2QYL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QYL _cell.length_a 91.758 _cell.length_b 105.353 _cell.length_c 87.827 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QYL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 78 A HIS 228 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 A NE2 HIS 88 A HIS 238 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc3 A NE2 HIS 124 A HIS 274 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc4 A OD2 ASP 125 A ASP 275 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc5 A OD1 ASP 125 A ASP 275 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc6 A OD1 ASP 127 A ASP 277 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc7 A OD1 ASP 242 A ASP 392 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc8 B ZN ZN . A ZN 501 1_555 F O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc9 C MG MG . A MG 502 1_555 F O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc10 C MG MG . A MG 502 1_555 F O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc11 C MG MG . A MG 502 1_555 F O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc12 C MG MG . A MG 502 1_555 F O HOH . A HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc13 C MG MG . A MG 502 1_555 F O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc14 D MG MG . A MG 503 1_555 F O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc15 D MG MG . A MG 503 1_555 F O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc16 D MG MG . A MG 503 1_555 F O HOH . A HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc17 D MG MG . A MG 503 1_555 F O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QYL _atom_sites.fract_transf_matrix[1][1] 0.010898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011386 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 501 ZN ZN . C 3 MG A 1 502 502 MG MG . D 3 MG A 1 503 503 MG MG . E 4 NPV A 1 1 1 NPV NVP . F 5 HOH A 1 504 1 HOH TIP . F 5 HOH A 2 505 2 HOH TIP . F 5 HOH A 3 506 3 HOH TIP . F 5 HOH A 4 507 4 HOH TIP . F 5 HOH A 5 508 5 HOH TIP . F 5 HOH A 6 509 6 HOH TIP . F 5 HOH A 7 510 7 HOH TIP . F 5 HOH A 8 511 8 HOH TIP . F 5 HOH A 9 512 9 HOH TIP . F 5 HOH A 10 513 10 HOH TIP . F 5 HOH A 11 514 11 HOH TIP . F 5 HOH A 12 515 12 HOH TIP . F 5 HOH A 13 516 13 HOH TIP . F 5 HOH A 14 517 14 HOH TIP . F 5 HOH A 15 518 15 HOH TIP . F 5 HOH A 16 519 16 HOH TIP . F 5 HOH A 17 520 17 HOH TIP . F 5 HOH A 18 521 18 HOH TIP . F 5 HOH A 19 522 19 HOH TIP . F 5 HOH A 20 523 20 HOH TIP . F 5 HOH A 21 524 21 HOH TIP . F 5 HOH A 22 525 22 HOH TIP . F 5 HOH A 23 526 23 HOH TIP . F 5 HOH A 24 527 24 HOH TIP . F 5 HOH A 25 528 25 HOH TIP . F 5 HOH A 26 529 26 HOH TIP . F 5 HOH A 27 530 27 HOH TIP . F 5 HOH A 28 531 28 HOH TIP . F 5 HOH A 29 532 29 HOH TIP . F 5 HOH A 30 533 30 HOH TIP . F 5 HOH A 31 534 31 HOH TIP . F 5 HOH A 32 535 32 HOH TIP . F 5 HOH A 33 536 33 HOH TIP . F 5 HOH A 34 537 34 HOH TIP . F 5 HOH A 35 538 35 HOH TIP . F 5 HOH A 36 539 36 HOH TIP . F 5 HOH A 37 540 37 HOH TIP . F 5 HOH A 38 541 38 HOH TIP . F 5 HOH A 39 542 39 HOH TIP . F 5 HOH A 40 543 40 HOH TIP . F 5 HOH A 41 544 41 HOH TIP . F 5 HOH A 42 545 42 HOH TIP . F 5 HOH A 43 546 43 HOH TIP . F 5 HOH A 44 547 44 HOH TIP . F 5 HOH A 45 548 45 HOH TIP . F 5 HOH A 46 549 46 HOH TIP . F 5 HOH A 47 550 47 HOH TIP . F 5 HOH A 48 551 48 HOH TIP . F 5 HOH A 49 552 49 HOH TIP . F 5 HOH A 50 553 50 HOH TIP . F 5 HOH A 51 554 51 HOH TIP . F 5 HOH A 52 555 52 HOH TIP . F 5 HOH A 53 556 53 HOH TIP . F 5 HOH A 54 557 54 HOH TIP . F 5 HOH A 55 558 55 HOH TIP . F 5 HOH A 56 559 56 HOH TIP . F 5 HOH A 57 560 57 HOH TIP . F 5 HOH A 58 561 58 HOH TIP . F 5 HOH A 59 562 59 HOH TIP . F 5 HOH A 60 563 60 HOH TIP . F 5 HOH A 61 564 61 HOH TIP . F 5 HOH A 62 565 62 HOH TIP . F 5 HOH A 63 566 63 HOH TIP . F 5 HOH A 64 567 64 HOH TIP . F 5 HOH A 65 568 65 HOH TIP . F 5 HOH A 66 569 66 HOH TIP . F 5 HOH A 67 570 67 HOH TIP . F 5 HOH A 68 571 68 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 43.458 _atom_site.Cartn_y 26.74 _atom_site.Cartn_z -3.037 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #