data_2QYM # _model_server_result.job_id HFT8o39zAAz3ZU0jqESPZQ _model_server_result.datetime_utc '2024-10-15 18:22:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2QYM # _exptl.entry_id 2QYM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QYM _cell.length_a 74.738 _cell.length_b 74.738 _cell.length_c 275.91 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+5/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 37.369 64.725007 229.925 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 1 1_555 A NE2 HIS 87 A HIS 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A NE2 HIS 123 A HIS 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A OD2 ASP 124 A ASP 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 241 A ASP 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 B ZN ZN . A ZN 1 1_555 D O HOH . A HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc6 B ZN ZN . A ZN 1 1_555 D O HOH . A HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc7 C MG MG . A MG 2 1_555 A OD1 ASP 124 A ASP 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc8 C MG MG . A MG 2 1_555 D O HOH . A HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc9 C MG MG . A MG 2 1_555 D O HOH . A HOH 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc10 C MG MG . A MG 2 1_555 D O HOH . A HOH 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc11 C MG MG . A MG 2 1_555 D O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc12 C MG MG . A MG 2 1_555 D O HOH . A HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QYM _atom_sites.fract_transf_matrix[1][1] 0.01338 _atom_sites.fract_transf_matrix[1][2] 0.007725 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 MG A 1 2 2 MG MG . D 4 HOH A 1 558 1 HOH TIP . D 4 HOH A 2 559 2 HOH TIP . D 4 HOH A 3 560 3 HOH TIP . D 4 HOH A 4 561 4 HOH TIP . D 4 HOH A 5 562 5 HOH TIP . D 4 HOH A 6 563 6 HOH TIP . D 4 HOH A 7 564 7 HOH TIP . D 4 HOH A 8 565 8 HOH TIP . D 4 HOH A 9 566 9 HOH TIP . D 4 HOH A 10 567 10 HOH TIP . D 4 HOH A 11 568 11 HOH TIP . D 4 HOH A 12 569 12 HOH TIP . D 4 HOH A 13 570 13 HOH TIP . D 4 HOH A 14 571 14 HOH TIP . D 4 HOH A 15 572 15 HOH TIP . D 4 HOH A 16 573 16 HOH TIP . D 4 HOH A 17 574 17 HOH TIP . D 4 HOH A 18 575 18 HOH TIP . D 4 HOH A 19 576 19 HOH TIP . D 4 HOH A 20 577 20 HOH TIP . D 4 HOH A 21 578 21 HOH TIP . D 4 HOH A 22 579 22 HOH TIP . D 4 HOH A 23 580 23 HOH TIP . D 4 HOH A 24 581 24 HOH TIP . D 4 HOH A 25 582 25 HOH TIP . D 4 HOH A 26 583 26 HOH TIP . D 4 HOH A 27 584 27 HOH TIP . D 4 HOH A 28 585 28 HOH TIP . D 4 HOH A 29 586 29 HOH TIP . D 4 HOH A 30 587 30 HOH TIP . D 4 HOH A 31 588 31 HOH TIP . D 4 HOH A 32 589 32 HOH TIP . D 4 HOH A 33 590 33 HOH TIP . D 4 HOH A 34 591 34 HOH TIP . D 4 HOH A 35 592 35 HOH TIP . D 4 HOH A 36 593 36 HOH TIP . D 4 HOH A 37 594 37 HOH TIP . D 4 HOH A 38 595 38 HOH TIP . D 4 HOH A 39 596 39 HOH TIP . D 4 HOH A 40 597 40 HOH TIP . D 4 HOH A 41 598 41 HOH TIP . D 4 HOH A 42 599 42 HOH TIP . D 4 HOH A 43 600 43 HOH TIP . D 4 HOH A 44 601 44 HOH TIP . D 4 HOH A 45 602 45 HOH TIP . D 4 HOH A 46 603 46 HOH TIP . D 4 HOH A 47 604 47 HOH TIP . D 4 HOH A 48 605 48 HOH TIP . D 4 HOH A 49 606 49 HOH TIP . D 4 HOH A 50 607 50 HOH TIP . D 4 HOH A 51 608 51 HOH TIP . D 4 HOH A 52 609 52 HOH TIP . D 4 HOH A 53 610 53 HOH TIP . D 4 HOH A 54 611 54 HOH TIP . D 4 HOH A 55 612 55 HOH TIP . D 4 HOH A 56 613 56 HOH TIP . D 4 HOH A 57 614 57 HOH TIP . D 4 HOH A 58 615 58 HOH TIP . D 4 HOH A 59 616 59 HOH TIP . D 4 HOH A 60 617 60 HOH TIP . D 4 HOH A 61 618 61 HOH TIP . D 4 HOH A 62 619 62 HOH TIP . D 4 HOH A 63 620 63 HOH TIP . D 4 HOH A 64 621 64 HOH TIP . D 4 HOH A 65 622 65 HOH TIP . D 4 HOH A 66 623 66 HOH TIP . D 4 HOH A 67 624 67 HOH TIP . D 4 HOH A 68 625 68 HOH TIP . D 4 HOH A 69 626 69 HOH TIP . D 4 HOH A 70 627 70 HOH TIP . D 4 HOH A 71 628 71 HOH TIP . D 4 HOH A 72 629 72 HOH TIP . D 4 HOH A 73 630 73 HOH TIP . D 4 HOH A 74 631 74 HOH TIP . D 4 HOH A 75 632 75 HOH TIP . D 4 HOH A 76 633 76 HOH TIP . D 4 HOH A 77 634 77 HOH TIP . D 4 HOH A 78 635 78 HOH TIP . D 4 HOH A 79 636 79 HOH TIP . D 4 HOH A 80 637 80 HOH TIP . D 4 HOH A 81 638 81 HOH TIP . D 4 HOH A 82 639 82 HOH TIP . D 4 HOH A 83 640 83 HOH TIP . D 4 HOH A 84 641 84 HOH TIP . D 4 HOH A 85 642 85 HOH TIP . D 4 HOH A 86 643 86 HOH TIP . D 4 HOH A 87 644 87 HOH TIP . D 4 HOH A 88 645 88 HOH TIP . D 4 HOH A 89 646 89 HOH TIP . D 4 HOH A 90 647 90 HOH TIP . D 4 HOH A 91 648 91 HOH TIP . D 4 HOH A 92 649 92 HOH TIP . D 4 HOH A 93 650 93 HOH TIP . D 4 HOH A 94 651 94 HOH TIP . D 4 HOH A 95 652 95 HOH TIP . D 4 HOH A 96 653 96 HOH TIP . D 4 HOH A 97 654 97 HOH TIP . D 4 HOH A 98 655 98 HOH TIP . D 4 HOH A 99 656 99 HOH TIP . D 4 HOH A 100 657 100 HOH TIP . D 4 HOH A 101 658 101 HOH TIP . D 4 HOH A 102 659 102 HOH TIP . D 4 HOH A 103 660 103 HOH TIP . D 4 HOH A 104 661 104 HOH TIP . D 4 HOH A 105 662 105 HOH TIP . D 4 HOH A 106 663 106 HOH TIP . D 4 HOH A 107 664 107 HOH TIP . D 4 HOH A 108 665 108 HOH TIP . D 4 HOH A 109 666 109 HOH TIP . D 4 HOH A 110 667 110 HOH TIP . D 4 HOH A 111 668 111 HOH TIP . D 4 HOH A 112 669 112 HOH TIP . D 4 HOH A 113 670 113 HOH TIP . D 4 HOH A 114 671 114 HOH TIP . D 4 HOH A 115 672 115 HOH TIP . D 4 HOH A 116 673 116 HOH TIP . D 4 HOH A 117 674 117 HOH TIP . D 4 HOH A 118 675 118 HOH TIP . D 4 HOH A 119 676 119 HOH TIP . D 4 HOH A 120 677 120 HOH TIP . D 4 HOH A 121 678 121 HOH TIP . D 4 HOH A 122 679 122 HOH TIP . D 4 HOH A 123 680 123 HOH TIP . D 4 HOH A 124 681 124 HOH TIP . D 4 HOH A 125 682 125 HOH TIP . D 4 HOH A 126 683 126 HOH TIP . D 4 HOH A 127 684 127 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.934 _atom_site.Cartn_y 38.639 _atom_site.Cartn_z 103.595 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #