data_2QZ7 # _model_server_result.job_id Uo7S4rGg9CIi8_RswGE-5Q _model_server_result.datetime_utc '2024-10-10 07:23:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qz7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":197}' # _entry.id 2QZ7 # _exptl.entry_id 2QZ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QZ7 _cell.length_a 67.821 _cell.length_b 67.821 _cell.length_c 170.866 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,L 1 1 B,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TRP 32 A TRP 30 1_555 C NA NA . A NA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 A O LEU 44 A LEU 42 1_555 D NA NA . A NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 A OD1 ASP 45 A ASP 43 1_555 D NA NA . A NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc4 A O SER 81 A SER 79 1_555 D NA NA . A NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc5 A O GLY 84 A GLY 82 1_555 C NA NA . A NA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc6 A O GLY 86 A GLY 84 1_555 C NA NA . A NA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc7 A OE1 GLU 91 A GLU 89 1_555 D NA NA . A NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc8 A O PHE 122 A PHE 120 1_555 E NA NA . A NA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc9 A O VAL 125 A VAL 123 1_555 E NA NA . A NA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc10 A OG1 THR 128 A THR 126 1_555 E NA NA . A NA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc11 B O TRP 32 B TRP 30 1_555 H NA NA . B NA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc12 B OG SER 35 B SER 33 1_555 K NA NA . B NA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc13 B O PRO 36 B PRO 34 1_555 K NA NA . B NA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc14 B O ARG 39 B ARG 37 1_555 K NA NA . B NA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc15 B O LEU 44 B LEU 42 1_555 I NA NA . B NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc16 B OD1 ASP 45 B ASP 43 1_555 I NA NA . B NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc17 B O SER 81 B SER 79 1_555 I NA NA . B NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc18 B O GLY 84 B GLY 82 1_555 H NA NA . B NA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc19 B O GLY 86 B GLY 84 1_555 H NA NA . B NA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc20 B OE2 GLU 91 B GLU 89 1_555 I NA NA . B NA 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc21 B O PHE 122 B PHE 120 1_555 J NA NA . B NA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc22 B O VAL 125 B VAL 123 1_555 J NA NA . B NA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc23 B OG1 THR 128 B THR 126 1_555 J NA NA . B NA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc24 C NA NA . A NA 193 1_555 L O HOH . A HOH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc25 H NA NA . B NA 193 1_555 M O HOH . B HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc26 H NA NA . B NA 193 1_555 M O HOH . B HOH 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc27 D NA NA . A NA 194 1_555 L O HOH . A HOH 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc28 I NA NA . B NA 194 1_555 M O HOH . B HOH 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc29 E NA NA . A NA 195 1_555 L O HOH . A HOH 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc30 J NA NA . B NA 195 1_555 M O HOH . B HOH 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc31 J NA NA . B NA 195 1_555 M O HOH . B HOH 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc32 K NA NA . B NA 196 1_555 M O HOH . B HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? covale ? covale1 A C ASN 76 A ASN 74 1_555 A N MSE 77 A MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 77 A MSE 75 1_555 A N SER 78 A SER 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C GLU 92 A GLU 90 1_555 A N MSE 93 A MSE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 93 A MSE 91 1_555 A N THR 94 A THR 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C GLU 185 A GLU 183 1_555 A N MSE 186 A MSE 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale6 A C MSE 186 A MSE 184 1_555 A N GLY 187 A GLY 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 B C ASN 76 B ASN 74 1_555 B N MSE 77 B MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale8 B C MSE 77 B MSE 75 1_555 B N SER 78 B SER 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 B C GLU 92 B GLU 90 1_555 B N MSE 93 B MSE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 B C MSE 93 B MSE 91 1_555 B N THR 94 B THR 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale11 B C GLU 185 B GLU 183 1_555 B N MSE 186 B MSE 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale12 B C MSE 186 B MSE 184 1_555 B N GLY 187 B GLY 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc33 J NA NA . B NA 195 1_555 B O ASP 123 B ASP 121 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 2QZ7 _atom_sites.fract_transf_matrix[1][1] 0.014745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 193 1 NA NA . D 2 NA A 1 194 3 NA NA . E 2 NA A 1 195 5 NA NA . F 3 EDO A 1 196 1 EDO EDO . G 3 EDO A 1 197 2 EDO EDO . H 2 NA B 1 193 2 NA NA . I 2 NA B 1 194 4 NA NA . J 2 NA B 1 195 6 NA NA . K 2 NA B 1 196 7 NA NA . L 4 HOH A 1 198 4 HOH HOH . L 4 HOH A 2 199 5 HOH HOH . L 4 HOH A 3 200 8 HOH HOH . L 4 HOH A 4 201 10 HOH HOH . L 4 HOH A 5 202 11 HOH HOH . L 4 HOH A 6 203 12 HOH HOH . L 4 HOH A 7 204 15 HOH HOH . L 4 HOH A 8 205 16 HOH HOH . L 4 HOH A 9 206 17 HOH HOH . L 4 HOH A 10 207 18 HOH HOH . L 4 HOH A 11 208 20 HOH HOH . L 4 HOH A 12 209 21 HOH HOH . L 4 HOH A 13 210 23 HOH HOH . L 4 HOH A 14 211 27 HOH HOH . L 4 HOH A 15 212 28 HOH HOH . L 4 HOH A 16 213 30 HOH HOH . L 4 HOH A 17 214 31 HOH HOH . L 4 HOH A 18 215 33 HOH HOH . L 4 HOH A 19 216 35 HOH HOH . L 4 HOH A 20 217 37 HOH HOH . L 4 HOH A 21 218 39 HOH HOH . L 4 HOH A 22 219 40 HOH HOH . L 4 HOH A 23 220 41 HOH HOH . L 4 HOH A 24 221 42 HOH HOH . L 4 HOH A 25 222 43 HOH HOH . L 4 HOH A 26 223 46 HOH HOH . L 4 HOH A 27 224 47 HOH HOH . L 4 HOH A 28 225 49 HOH HOH . L 4 HOH A 29 226 52 HOH HOH . L 4 HOH A 30 227 53 HOH HOH . L 4 HOH A 31 228 55 HOH HOH . L 4 HOH A 32 229 56 HOH HOH . L 4 HOH A 33 230 57 HOH HOH . L 4 HOH A 34 231 58 HOH HOH . L 4 HOH A 35 232 59 HOH HOH . L 4 HOH A 36 233 60 HOH HOH . L 4 HOH A 37 234 61 HOH HOH . L 4 HOH A 38 235 62 HOH HOH . L 4 HOH A 39 236 68 HOH HOH . L 4 HOH A 40 237 71 HOH HOH . L 4 HOH A 41 238 72 HOH HOH . L 4 HOH A 42 239 73 HOH HOH . L 4 HOH A 43 240 74 HOH HOH . L 4 HOH A 44 241 75 HOH HOH . L 4 HOH A 45 242 76 HOH HOH . L 4 HOH A 46 243 80 HOH HOH . L 4 HOH A 47 244 84 HOH HOH . L 4 HOH A 48 245 86 HOH HOH . L 4 HOH A 49 246 87 HOH HOH . L 4 HOH A 50 247 89 HOH HOH . L 4 HOH A 51 248 90 HOH HOH . L 4 HOH A 52 249 94 HOH HOH . L 4 HOH A 53 250 95 HOH HOH . L 4 HOH A 54 251 98 HOH HOH . L 4 HOH A 55 252 99 HOH HOH . L 4 HOH A 56 253 104 HOH HOH . L 4 HOH A 57 254 106 HOH HOH . L 4 HOH A 58 255 111 HOH HOH . L 4 HOH A 59 256 112 HOH HOH . L 4 HOH A 60 257 113 HOH HOH . L 4 HOH A 61 258 114 HOH HOH . L 4 HOH A 62 259 117 HOH HOH . M 4 HOH B 1 197 1 HOH HOH . M 4 HOH B 2 198 2 HOH HOH . M 4 HOH B 3 199 3 HOH HOH . M 4 HOH B 4 200 6 HOH HOH . M 4 HOH B 5 201 7 HOH HOH . M 4 HOH B 6 202 9 HOH HOH . M 4 HOH B 7 203 13 HOH HOH . M 4 HOH B 8 204 14 HOH HOH . M 4 HOH B 9 205 19 HOH HOH . M 4 HOH B 10 206 22 HOH HOH . M 4 HOH B 11 207 24 HOH HOH . M 4 HOH B 12 208 25 HOH HOH . M 4 HOH B 13 209 26 HOH HOH . M 4 HOH B 14 210 29 HOH HOH . M 4 HOH B 15 211 32 HOH HOH . M 4 HOH B 16 212 34 HOH HOH . M 4 HOH B 17 213 36 HOH HOH . M 4 HOH B 18 214 38 HOH HOH . M 4 HOH B 19 215 44 HOH HOH . M 4 HOH B 20 216 45 HOH HOH . M 4 HOH B 21 217 48 HOH HOH . M 4 HOH B 22 218 50 HOH HOH . M 4 HOH B 23 219 51 HOH HOH . M 4 HOH B 24 220 54 HOH HOH . M 4 HOH B 25 221 63 HOH HOH . M 4 HOH B 26 222 64 HOH HOH . M 4 HOH B 27 223 65 HOH HOH . M 4 HOH B 28 224 66 HOH HOH . M 4 HOH B 29 225 67 HOH HOH . M 4 HOH B 30 226 69 HOH HOH . M 4 HOH B 31 227 70 HOH HOH . M 4 HOH B 32 228 77 HOH HOH . M 4 HOH B 33 229 78 HOH HOH . M 4 HOH B 34 230 79 HOH HOH . M 4 HOH B 35 231 81 HOH HOH . M 4 HOH B 36 232 82 HOH HOH . M 4 HOH B 37 233 83 HOH HOH . M 4 HOH B 38 234 85 HOH HOH . M 4 HOH B 39 235 88 HOH HOH . M 4 HOH B 40 236 91 HOH HOH . M 4 HOH B 41 237 92 HOH HOH . M 4 HOH B 42 238 93 HOH HOH . M 4 HOH B 43 239 96 HOH HOH . M 4 HOH B 44 240 97 HOH HOH . M 4 HOH B 45 241 100 HOH HOH . M 4 HOH B 46 242 101 HOH HOH . M 4 HOH B 47 243 102 HOH HOH . M 4 HOH B 48 244 103 HOH HOH . M 4 HOH B 49 245 105 HOH HOH . M 4 HOH B 50 246 107 HOH HOH . M 4 HOH B 51 247 108 HOH HOH . M 4 HOH B 52 248 109 HOH HOH . M 4 HOH B 53 249 110 HOH HOH . M 4 HOH B 54 250 115 HOH HOH . M 4 HOH B 55 251 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 3 16.868 43.882 14.894 1 44.55 ? C1 EDO 197 A 1 HETATM 2 O O1 EDO . . . G 3 17.09 43.047 16.068 1 41.56 ? O1 EDO 197 A 1 HETATM 3 C C2 EDO . . . G 3 15.792 43.488 13.85 1 48.36 ? C2 EDO 197 A 1 HETATM 4 O O2 EDO . . . G 3 14.395 43.463 14.264 1 49.28 ? O2 EDO 197 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #