data_2QZS
#
_model_server_result.job_id            '_ebPQkgc1qtq_cnWldrlMg' 
_model_server_result.datetime_utc      '2024-11-24 19:58:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qzs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":487}' 
#
_entry.id    2QZS 
#
_exptl.entry_id    2QZS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2QZS 
_cell.length_a            126.494 
_cell.length_b            126.494 
_cell.length_c            151.878 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QZS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 38 n n 
PB O2B ADP sing 39 n n 
PB O3B ADP sing 40 n n 
PB O3A ADP sing 41 n n 
O2B HOB2 ADP sing 42 n n 
O3B HOB3 ADP sing 43 n n 
PA O1A ADP doub 44 n n 
PA O2A ADP sing 45 n n 
PA O3A ADP sing 46 n n 
PA O5' ADP sing 47 n n 
O2A HOA2 ADP sing 48 n n 
O5' C5' ADP sing 49 n n 
C5' C4' ADP sing 50 n n 
C5' "H5'1" ADP sing 51 n n 
C5' "H5'2" ADP sing 52 n n 
C4' O4' ADP sing 53 n n 
C4' C3' ADP sing 54 n n 
C4' H4' ADP sing 55 n n 
O4' C1' ADP sing 56 n n 
C3' O3' ADP sing 57 n n 
C3' C2' ADP sing 58 n n 
C3' H3' ADP sing 59 n n 
O3' HO3' ADP sing 60 n n 
C2' O2' ADP sing 61 n n 
C2' C1' ADP sing 62 n n 
C2' H2' ADP sing 63 n n 
O2' HO2' ADP sing 64 n n 
C1' N9 ADP sing 65 n n 
C1' H1' ADP sing 66 n n 
N9 C8 ADP sing 67 n y 
N9 C4 ADP sing 68 n y 
C8 N7 ADP doub 69 n y 
C8 H8 ADP sing 70 n n 
N7 C5 ADP sing 71 n y 
C5 C6 ADP sing 72 n y 
C5 C4 ADP doub 73 n y 
C6 N6 ADP sing 74 n n 
C6 N1 ADP doub 75 n y 
N6 HN61 ADP sing 76 n n 
N6 HN62 ADP sing 77 n n 
N1 C2 ADP sing 78 n y 
C2 N3 ADP doub 79 n y 
C2 H2 ADP sing 80 n n 
N3 C4 ADP sing 81 n y 
#
_atom_sites.entry_id                     2QZS 
_atom_sites.fract_transf_matrix[1][1]    0.007906 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007906 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006584 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GLC A 1 486 481 GLC GLC . 
C 3 ADP A 1 487 485 ADP ADP . 
D 4 250 A 1 488 487 250 250 . 
E 5 HOH A 1 489 1 HOH HOH . 
E 5 HOH A 2 490 2 HOH HOH . 
E 5 HOH A 3 491 3 HOH HOH . 
E 5 HOH A 4 492 5 HOH HOH . 
E 5 HOH A 5 493 6 HOH HOH . 
E 5 HOH A 6 494 7 HOH HOH . 
E 5 HOH A 7 495 8 HOH HOH . 
E 5 HOH A 8 496 9 HOH HOH . 
E 5 HOH A 9 497 10 HOH HOH . 
E 5 HOH A 10 498 11 HOH HOH . 
E 5 HOH A 11 499 12 HOH HOH . 
E 5 HOH A 12 500 13 HOH HOH . 
E 5 HOH A 13 501 14 HOH HOH . 
E 5 HOH A 14 502 15 HOH HOH . 
E 5 HOH A 15 503 16 HOH HOH . 
E 5 HOH A 16 504 17 HOH HOH . 
E 5 HOH A 17 505 18 HOH HOH . 
E 5 HOH A 18 506 19 HOH HOH . 
E 5 HOH A 19 507 20 HOH HOH . 
E 5 HOH A 20 508 21 HOH HOH . 
E 5 HOH A 21 509 22 HOH HOH . 
E 5 HOH A 22 510 23 HOH HOH . 
E 5 HOH A 23 511 24 HOH HOH . 
E 5 HOH A 24 512 25 HOH HOH . 
E 5 HOH A 25 513 26 HOH HOH . 
E 5 HOH A 26 514 27 HOH HOH . 
E 5 HOH A 27 515 28 HOH HOH . 
E 5 HOH A 28 516 29 HOH HOH . 
E 5 HOH A 29 517 30 HOH HOH . 
E 5 HOH A 30 518 31 HOH HOH . 
E 5 HOH A 31 519 32 HOH HOH . 
E 5 HOH A 32 520 33 HOH HOH . 
E 5 HOH A 33 521 34 HOH HOH . 
E 5 HOH A 34 522 35 HOH HOH . 
E 5 HOH A 35 523 36 HOH HOH . 
E 5 HOH A 36 524 37 HOH HOH . 
E 5 HOH A 37 525 38 HOH HOH . 
E 5 HOH A 38 526 39 HOH HOH . 
E 5 HOH A 39 527 40 HOH HOH . 
E 5 HOH A 40 528 41 HOH HOH . 
E 5 HOH A 41 529 42 HOH HOH . 
E 5 HOH A 42 530 43 HOH HOH . 
E 5 HOH A 43 531 44 HOH HOH . 
E 5 HOH A 44 532 45 HOH HOH . 
E 5 HOH A 45 533 46 HOH HOH . 
E 5 HOH A 46 534 47 HOH HOH . 
E 5 HOH A 47 535 48 HOH HOH . 
E 5 HOH A 48 536 49 HOH HOH . 
E 5 HOH A 49 537 50 HOH HOH . 
E 5 HOH A 50 538 51 HOH HOH . 
E 5 HOH A 51 539 52 HOH HOH . 
E 5 HOH A 52 540 53 HOH HOH . 
E 5 HOH A 53 541 54 HOH HOH . 
E 5 HOH A 54 542 56 HOH HOH . 
E 5 HOH A 55 543 57 HOH HOH . 
E 5 HOH A 56 544 58 HOH HOH . 
E 5 HOH A 57 545 59 HOH HOH . 
E 5 HOH A 58 546 60 HOH HOH . 
E 5 HOH A 59 547 61 HOH HOH . 
E 5 HOH A 60 548 62 HOH HOH . 
E 5 HOH A 61 549 63 HOH HOH . 
E 5 HOH A 62 550 64 HOH HOH . 
E 5 HOH A 63 551 65 HOH HOH . 
E 5 HOH A 64 552 66 HOH HOH . 
E 5 HOH A 65 553 67 HOH HOH . 
E 5 HOH A 66 554 68 HOH HOH . 
E 5 HOH A 67 555 69 HOH HOH . 
E 5 HOH A 68 556 70 HOH HOH . 
E 5 HOH A 69 557 71 HOH HOH . 
E 5 HOH A 70 558 72 HOH HOH . 
E 5 HOH A 71 559 73 HOH HOH . 
E 5 HOH A 72 560 74 HOH HOH . 
E 5 HOH A 73 561 75 HOH HOH . 
E 5 HOH A 74 562 76 HOH HOH . 
E 5 HOH A 75 563 77 HOH HOH . 
E 5 HOH A 76 564 78 HOH HOH . 
E 5 HOH A 77 565 79 HOH HOH . 
E 5 HOH A 78 566 80 HOH HOH . 
E 5 HOH A 79 567 81 HOH HOH . 
E 5 HOH A 80 568 82 HOH HOH . 
E 5 HOH A 81 569 83 HOH HOH . 
E 5 HOH A 82 570 84 HOH HOH . 
E 5 HOH A 83 571 85 HOH HOH . 
E 5 HOH A 84 572 86 HOH HOH . 
E 5 HOH A 85 573 87 HOH HOH . 
E 5 HOH A 86 574 88 HOH HOH . 
E 5 HOH A 87 575 89 HOH HOH . 
E 5 HOH A 88 576 90 HOH HOH . 
E 5 HOH A 89 577 91 HOH HOH . 
E 5 HOH A 90 578 92 HOH HOH . 
E 5 HOH A 91 579 93 HOH HOH . 
E 5 HOH A 92 580 94 HOH HOH . 
E 5 HOH A 93 581 95 HOH HOH . 
E 5 HOH A 94 582 96 HOH HOH . 
E 5 HOH A 95 583 97 HOH HOH . 
E 5 HOH A 96 584 98 HOH HOH . 
E 5 HOH A 97 585 99 HOH HOH . 
E 5 HOH A 98 586 100 HOH HOH . 
E 5 HOH A 99 587 101 HOH HOH . 
E 5 HOH A 100 588 102 HOH HOH . 
E 5 HOH A 101 589 103 HOH HOH . 
E 5 HOH A 102 590 104 HOH HOH . 
E 5 HOH A 103 591 105 HOH HOH . 
E 5 HOH A 104 592 106 HOH HOH . 
E 5 HOH A 105 593 107 HOH HOH . 
E 5 HOH A 106 594 108 HOH HOH . 
E 5 HOH A 107 595 109 HOH HOH . 
E 5 HOH A 108 596 110 HOH HOH . 
E 5 HOH A 109 597 111 HOH HOH . 
E 5 HOH A 110 598 112 HOH HOH . 
E 5 HOH A 111 599 113 HOH HOH . 
E 5 HOH A 112 600 114 HOH HOH . 
E 5 HOH A 113 601 115 HOH HOH . 
E 5 HOH A 114 602 116 HOH HOH . 
E 5 HOH A 115 603 117 HOH HOH . 
E 5 HOH A 116 604 118 HOH HOH . 
E 5 HOH A 117 605 119 HOH HOH . 
E 5 HOH A 118 606 120 HOH HOH . 
E 5 HOH A 119 607 121 HOH HOH . 
E 5 HOH A 120 608 122 HOH HOH . 
E 5 HOH A 121 609 123 HOH HOH . 
E 5 HOH A 122 610 124 HOH HOH . 
E 5 HOH A 123 611 125 HOH HOH . 
E 5 HOH A 124 612 126 HOH HOH . 
E 5 HOH A 125 613 127 HOH HOH . 
E 5 HOH A 126 614 128 HOH HOH . 
E 5 HOH A 127 615 129 HOH HOH . 
E 5 HOH A 128 616 130 HOH HOH . 
E 5 HOH A 129 617 131 HOH HOH . 
E 5 HOH A 130 618 132 HOH HOH . 
E 5 HOH A 131 619 133 HOH HOH . 
E 5 HOH A 132 620 134 HOH HOH . 
E 5 HOH A 133 621 135 HOH HOH . 
E 5 HOH A 134 622 136 HOH HOH . 
E 5 HOH A 135 623 137 HOH HOH . 
E 5 HOH A 136 624 138 HOH HOH . 
E 5 HOH A 137 625 139 HOH HOH . 
E 5 HOH A 138 626 140 HOH HOH . 
E 5 HOH A 139 627 141 HOH HOH . 
E 5 HOH A 140 628 142 HOH HOH . 
E 5 HOH A 141 629 144 HOH HOH . 
E 5 HOH A 142 630 145 HOH HOH . 
E 5 HOH A 143 631 146 HOH HOH . 
E 5 HOH A 144 632 147 HOH HOH . 
E 5 HOH A 145 633 148 HOH HOH . 
E 5 HOH A 146 634 149 HOH HOH . 
E 5 HOH A 147 635 151 HOH HOH . 
E 5 HOH A 148 636 152 HOH HOH . 
E 5 HOH A 149 637 153 HOH HOH . 
E 5 HOH A 150 638 154 HOH HOH . 
E 5 HOH A 151 639 155 HOH HOH . 
E 5 HOH A 152 640 156 HOH HOH . 
E 5 HOH A 153 641 157 HOH HOH . 
E 5 HOH A 154 642 158 HOH HOH . 
E 5 HOH A 155 643 159 HOH HOH . 
E 5 HOH A 156 644 160 HOH HOH . 
E 5 HOH A 157 645 161 HOH HOH . 
E 5 HOH A 158 646 162 HOH HOH . 
E 5 HOH A 159 647 163 HOH HOH . 
E 5 HOH A 160 648 164 HOH HOH . 
E 5 HOH A 161 649 165 HOH HOH . 
E 5 HOH A 162 650 166 HOH HOH . 
E 5 HOH A 163 651 167 HOH HOH . 
E 5 HOH A 164 652 168 HOH HOH . 
E 5 HOH A 165 653 169 HOH HOH . 
E 5 HOH A 166 654 170 HOH HOH . 
E 5 HOH A 167 655 171 HOH HOH . 
E 5 HOH A 168 656 172 HOH HOH . 
E 5 HOH A 169 657 173 HOH HOH . 
E 5 HOH A 170 658 174 HOH HOH . 
E 5 HOH A 171 659 176 HOH HOH . 
E 5 HOH A 172 660 177 HOH HOH . 
E 5 HOH A 173 661 179 HOH HOH . 
E 5 HOH A 174 662 180 HOH HOH . 
E 5 HOH A 175 663 181 HOH HOH . 
E 5 HOH A 176 664 182 HOH HOH . 
E 5 HOH A 177 665 183 HOH HOH . 
E 5 HOH A 178 666 184 HOH HOH . 
E 5 HOH A 179 667 185 HOH HOH . 
E 5 HOH A 180 668 186 HOH HOH . 
E 5 HOH A 181 669 187 HOH HOH . 
E 5 HOH A 182 670 188 HOH HOH . 
E 5 HOH A 183 671 189 HOH HOH . 
E 5 HOH A 184 672 190 HOH HOH . 
E 5 HOH A 185 673 191 HOH HOH . 
E 5 HOH A 186 674 192 HOH HOH . 
E 5 HOH A 187 675 193 HOH HOH . 
E 5 HOH A 188 676 194 HOH HOH . 
E 5 HOH A 189 677 195 HOH HOH . 
E 5 HOH A 190 678 196 HOH HOH . 
E 5 HOH A 191 679 197 HOH HOH . 
E 5 HOH A 192 680 198 HOH HOH . 
E 5 HOH A 193 681 199 HOH HOH . 
E 5 HOH A 194 682 200 HOH HOH . 
E 5 HOH A 195 683 201 HOH HOH . 
E 5 HOH A 196 684 202 HOH HOH . 
E 5 HOH A 197 685 203 HOH HOH . 
E 5 HOH A 198 686 204 HOH HOH . 
E 5 HOH A 199 687 205 HOH HOH . 
E 5 HOH A 200 688 206 HOH HOH . 
E 5 HOH A 201 689 207 HOH HOH . 
E 5 HOH A 202 690 208 HOH HOH . 
E 5 HOH A 203 691 209 HOH HOH . 
E 5 HOH A 204 692 210 HOH HOH . 
E 5 HOH A 205 693 211 HOH HOH . 
E 5 HOH A 206 694 212 HOH HOH . 
E 5 HOH A 207 695 213 HOH HOH . 
E 5 HOH A 208 696 214 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . C 3 21.921 -5.409 39.051 1 35.37 ? PB ADP 487 A 1 
HETATM 2 O O1B ADP . . . C 3 20.806 -4.849 38.185 1 33.66 ? O1B ADP 487 A 1 
HETATM 3 O O2B ADP . . . C 3 23.171 -4.555 39.223 1 35.46 ? O2B ADP 487 A 1 
HETATM 4 O O3B ADP . . . C 3 22.33 -6.861 38.54 1 34.02 ? O3B ADP 487 A 1 
HETATM 5 P PA ADP . . . C 3 21.322 -6.755 41.586 1 34.29 ? PA ADP 487 A 1 
HETATM 6 O O1A ADP . . . C 3 20.671 -7.991 41.055 1 32.88 ? O1A ADP 487 A 1 
HETATM 7 O O2A ADP . . . C 3 20.774 -6.12 42.839 1 33.11 ? O2A ADP 487 A 1 
HETATM 8 O O3A ADP . . . C 3 21.223 -5.582 40.49 1 34.44 ? O3A ADP 487 A 1 
HETATM 9 O O5' ADP . . . C 3 22.887 -7.045 41.829 1 34.36 ? O5' ADP 487 A 1 
HETATM 10 C C5' ADP . . . C 3 23.868 -6.037 42.013 1 32.83 ? C5' ADP 487 A 1 
HETATM 11 C C4' ADP . . . C 3 25.104 -6.696 42.587 1 32.34 ? C4' ADP 487 A 1 
HETATM 12 O O4' ADP . . . C 3 26.209 -5.802 42.391 1 32.39 ? O4' ADP 487 A 1 
HETATM 13 C C3' ADP . . . C 3 24.935 -6.824 44.091 1 33.44 ? C3' ADP 487 A 1 
HETATM 14 O O3' ADP . . . C 3 25.823 -7.842 44.614 1 31.47 ? O3' ADP 487 A 1 
HETATM 15 C C2' ADP . . . C 3 25.38 -5.433 44.546 1 33.5 ? C2' ADP 487 A 1 
HETATM 16 O O2' ADP . . . C 3 25.805 -5.44 45.893 1 33.49 ? O2' ADP 487 A 1 
HETATM 17 C C1' ADP . . . C 3 26.576 -5.211 43.634 1 34.06 ? C1' ADP 487 A 1 
HETATM 18 N N9 ADP . . . C 3 26.911 -3.8 43.366 1 34.74 ? N9 ADP 487 A 1 
HETATM 19 C C8 ADP . . . C 3 26.229 -2.923 42.578 1 34.65 ? C8 ADP 487 A 1 
HETATM 20 N N7 ADP . . . C 3 26.915 -1.746 42.581 1 34.34 ? N7 ADP 487 A 1 
HETATM 21 C C5 ADP . . . C 3 28.021 -1.929 43.353 1 34.72 ? C5 ADP 487 A 1 
HETATM 22 C C6 ADP . . . C 3 29.089 -1.109 43.718 1 34.85 ? C6 ADP 487 A 1 
HETATM 23 N N6 ADP . . . C 3 29.151 0.181 43.262 1 34.56 ? N6 ADP 487 A 1 
HETATM 24 N N1 ADP . . . C 3 30.044 -1.615 44.537 1 34.23 ? N1 ADP 487 A 1 
HETATM 25 C C2 ADP . . . C 3 30.023 -2.877 44.984 1 34.26 ? C2 ADP 487 A 1 
HETATM 26 N N3 ADP . . . C 3 29.005 -3.693 44.652 1 34.83 ? N3 ADP 487 A 1 
HETATM 27 C C4 ADP . . . C 3 28.012 -3.231 43.836 1 34.24 ? C4 ADP 487 A 1 
#
_model_server_stats.io_time_ms              81 
_model_server_stats.parse_time_ms           98 
_model_server_stats.create_model_time_ms    90 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           27 
#