data_2R0M # _model_server_result.job_id ni83DC966wXLS5V999nvbA _model_server_result.datetime_utc '2024-11-15 00:37:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r0m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 2R0M # _exptl.entry_id 2R0M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2R0M _cell.length_a 116.88 _cell.length_b 116.88 _cell.length_c 128.11 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 116.88 0 0 3 'crystal symmetry operation' 8_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 128.11 4 'crystal symmetry operation' 11_656 -x+y+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 116.88 0 128.11 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 98 n n PA O2A FAD sing 99 n n PA O5B FAD sing 100 n n PA O3P FAD sing 101 n n O2A HOA2 FAD sing 102 n n O5B C5B FAD sing 103 n n C5B C4B FAD sing 104 n n C5B H51A FAD sing 105 n n C5B H52A FAD sing 106 n n C4B O4B FAD sing 107 n n C4B C3B FAD sing 108 n n C4B H4B FAD sing 109 n n O4B C1B FAD sing 110 n n C3B O3B FAD sing 111 n n C3B C2B FAD sing 112 n n C3B H3B FAD sing 113 n n O3B HO3A FAD sing 114 n n C2B O2B FAD sing 115 n n C2B C1B FAD sing 116 n n C2B H2B FAD sing 117 n n O2B HO2A FAD sing 118 n n C1B N9A FAD sing 119 n n C1B H1B FAD sing 120 n n N9A C8A FAD sing 121 n y N9A C4A FAD sing 122 n y C8A N7A FAD doub 123 n y C8A H8A FAD sing 124 n n N7A C5A FAD sing 125 n y C5A C6A FAD sing 126 n y C5A C4A FAD doub 127 n y C6A N6A FAD sing 128 n n C6A N1A FAD doub 129 n y N6A H61A FAD sing 130 n n N6A H62A FAD sing 131 n n N1A C2A FAD sing 132 n y C2A N3A FAD doub 133 n y C2A H2A FAD sing 134 n n N3A C4A FAD sing 135 n y N1 C2 FAD sing 136 n n N1 C10 FAD doub 137 n n C2 O2 FAD doub 138 n n C2 N3 FAD sing 139 n n N3 C4 FAD sing 140 n n N3 HN3 FAD sing 141 n n C4 O4 FAD doub 142 n n C4 C4X FAD sing 143 n n C4X N5 FAD doub 144 n n C4X C10 FAD sing 145 n n N5 C5X FAD sing 146 n n C5X C6 FAD doub 147 n y C5X C9A FAD sing 148 n y C6 C7 FAD sing 149 n y C6 H6 FAD sing 150 n n C7 C7M FAD sing 151 n n C7 C8 FAD doub 152 n y C7M HM71 FAD sing 153 n n C7M HM72 FAD sing 154 n n C7M HM73 FAD sing 155 n n C8 C8M FAD sing 156 n n C8 C9 FAD sing 157 n y C8M HM81 FAD sing 158 n n C8M HM82 FAD sing 159 n n C8M HM83 FAD sing 160 n n C9 C9A FAD doub 161 n y C9 H9 FAD sing 162 n n C9A N10 FAD sing 163 n n N10 C10 FAD sing 164 n n N10 C1' FAD sing 165 n n C1' C2' FAD sing 166 n n C1' "H1'1" FAD sing 167 n n C1' "H1'2" FAD sing 168 n n C2' O2' FAD sing 169 n n C2' C3' FAD sing 170 n n C2' H2' FAD sing 171 n n O2' HO2' FAD sing 172 n n C3' O3' FAD sing 173 n n C3' C4' FAD sing 174 n n C3' H3' FAD sing 175 n n O3' HO3' FAD sing 176 n n C4' O4' FAD sing 177 n n C4' C5' FAD sing 178 n n C4' H4' FAD sing 179 n n O4' HO4' FAD sing 180 n n C5' O5' FAD sing 181 n n C5' "H5'1" FAD sing 182 n n C5' "H5'2" FAD sing 183 n n O5' P FAD sing 184 n n P O1P FAD doub 185 n n P O2P FAD sing 186 n n P O3P FAD sing 187 n n O2P HOP2 FAD sing 188 n n # _atom_sites.entry_id 2R0M _atom_sites.fract_transf_matrix[1][1] 0.008556 _atom_sites.fract_transf_matrix[1][2] 0.00494 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009879 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 401 401 FAD FAD . C 3 4NI A 1 402 402 4NI 4NB . D 4 HOH A 1 500 500 HOH WAT . D 4 HOH A 2 501 501 HOH WAT . D 4 HOH A 3 502 502 HOH WAT . D 4 HOH A 4 503 503 HOH WAT . D 4 HOH A 5 504 504 HOH WAT . D 4 HOH A 6 505 505 HOH WAT . D 4 HOH A 7 506 506 HOH WAT . D 4 HOH A 8 507 507 HOH WAT . D 4 HOH A 9 508 508 HOH WAT . D 4 HOH A 10 509 509 HOH WAT . D 4 HOH A 11 510 510 HOH WAT . D 4 HOH A 12 511 511 HOH WAT . D 4 HOH A 13 512 512 HOH WAT . D 4 HOH A 14 513 513 HOH WAT . D 4 HOH A 15 514 514 HOH WAT . D 4 HOH A 16 515 515 HOH WAT . D 4 HOH A 17 516 516 HOH WAT . D 4 HOH A 18 517 517 HOH WAT . D 4 HOH A 19 518 518 HOH WAT . D 4 HOH A 20 519 519 HOH WAT . D 4 HOH A 21 520 520 HOH WAT . D 4 HOH A 22 521 521 HOH WAT . D 4 HOH A 23 522 522 HOH WAT . D 4 HOH A 24 523 523 HOH WAT . D 4 HOH A 25 524 524 HOH WAT . D 4 HOH A 26 525 525 HOH WAT . D 4 HOH A 27 526 526 HOH WAT . D 4 HOH A 28 527 527 HOH WAT . D 4 HOH A 29 528 528 HOH WAT . D 4 HOH A 30 529 529 HOH WAT . D 4 HOH A 31 530 530 HOH WAT . D 4 HOH A 32 531 531 HOH WAT . D 4 HOH A 33 532 532 HOH WAT . D 4 HOH A 34 533 533 HOH WAT . D 4 HOH A 35 534 534 HOH WAT . D 4 HOH A 36 535 535 HOH WAT . D 4 HOH A 37 536 536 HOH WAT . D 4 HOH A 38 537 537 HOH WAT . D 4 HOH A 39 538 538 HOH WAT . D 4 HOH A 40 539 539 HOH WAT . D 4 HOH A 41 540 540 HOH WAT . D 4 HOH A 42 541 541 HOH WAT . D 4 HOH A 43 542 542 HOH WAT . D 4 HOH A 44 543 543 HOH WAT . D 4 HOH A 45 544 544 HOH WAT . D 4 HOH A 46 545 545 HOH WAT . D 4 HOH A 47 546 546 HOH WAT . D 4 HOH A 48 547 547 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 61.369 14.929 45.543 1 21.51 ? PA FAD 401 A 1 HETATM 2 O O1A FAD . . . B 2 62.556 14.578 44.761 1 21.6 ? O1A FAD 401 A 1 HETATM 3 O O2A FAD . . . B 2 60.177 15.334 44.704 1 23.7 ? O2A FAD 401 A 1 HETATM 4 O O5B FAD . . . B 2 60.895 13.744 46.439 1 22.68 ? O5B FAD 401 A 1 HETATM 5 C C5B FAD . . . B 2 59.784 13.776 47.303 1 21.6 ? C5B FAD 401 A 1 HETATM 6 C C4B FAD . . . B 2 59.503 12.483 48.076 1 20.47 ? C4B FAD 401 A 1 HETATM 7 O O4B FAD . . . B 2 59.4 11.505 47.035 1 22.09 ? O4B FAD 401 A 1 HETATM 8 C C3B FAD . . . B 2 60.615 11.983 49.053 1 22.53 ? C3B FAD 401 A 1 HETATM 9 O O3B FAD . . . B 2 59.966 11.349 50.209 1 25.57 ? O3B FAD 401 A 1 HETATM 10 C C2B FAD . . . B 2 61.319 10.879 48.16 1 20.62 ? C2B FAD 401 A 1 HETATM 11 O O2B FAD . . . B 2 61.852 9.794 48.905 1 21.33 ? O2B FAD 401 A 1 HETATM 12 C C1B FAD . . . B 2 60.278 10.408 47.166 1 19.34 ? C1B FAD 401 A 1 HETATM 13 N N9A FAD . . . B 2 60.762 10.019 45.838 1 18.97 ? N9A FAD 401 A 1 HETATM 14 C C8A FAD . . . B 2 61.331 10.762 44.811 1 18.58 ? C8A FAD 401 A 1 HETATM 15 N N7A FAD . . . B 2 61.649 10.096 43.759 1 19.79 ? N7A FAD 401 A 1 HETATM 16 C C5A FAD . . . B 2 61.28 8.8 44.064 1 17.64 ? C5A FAD 401 A 1 HETATM 17 C C6A FAD . . . B 2 61.334 7.464 43.33 1 17.62 ? C6A FAD 401 A 1 HETATM 18 N N6A FAD . . . B 2 61.828 7.371 42.101 1 18.23 ? N6A FAD 401 A 1 HETATM 19 N N1A FAD . . . B 2 60.826 6.216 44.001 1 17.62 ? N1A FAD 401 A 1 HETATM 20 C C2A FAD . . . B 2 60.289 6.254 45.3 1 17.99 ? C2A FAD 401 A 1 HETATM 21 N N3A FAD . . . B 2 60.214 7.54 46.054 1 18.65 ? N3A FAD 401 A 1 HETATM 22 C C4A FAD . . . B 2 60.709 8.718 45.393 1 18.06 ? C4A FAD 401 A 1 HETATM 23 N N1 FAD . . . B 2 69.74 21.551 46.939 1 26.93 ? N1 FAD 401 A 1 HETATM 24 C C2 FAD . . . B 2 70.946 22.056 46.374 1 27.22 ? C2 FAD 401 A 1 HETATM 25 O O2 FAD . . . B 2 71.22 21.756 45.273 1 30.01 ? O2 FAD 401 A 1 HETATM 26 N N3 FAD . . . B 2 71.739 22.924 47.247 1 29.71 ? N3 FAD 401 A 1 HETATM 27 C C4 FAD . . . B 2 71.427 23.34 48.645 1 29.07 ? C4 FAD 401 A 1 HETATM 28 O O4 FAD . . . B 2 72.221 24.083 49.208 1 30.95 ? O4 FAD 401 A 1 HETATM 29 C C4X FAD . . . B 2 70.178 22.81 49.183 1 25.43 ? C4X FAD 401 A 1 HETATM 30 N N5 FAD . . . B 2 69.821 23.186 50.481 1 23.55 ? N5 FAD 401 A 1 HETATM 31 C C5X FAD . . . B 2 68.569 22.697 51.059 1 23.56 ? C5X FAD 401 A 1 HETATM 32 C C6 FAD . . . B 2 68.275 23.194 52.451 1 24.3 ? C6 FAD 401 A 1 HETATM 33 C C7 FAD . . . B 2 67.003 22.782 53.175 1 22.78 ? C7 FAD 401 A 1 HETATM 34 C C7M FAD . . . B 2 66.86 23.374 54.534 1 23.38 ? C7M FAD 401 A 1 HETATM 35 C C8 FAD . . . B 2 66.013 21.825 52.465 1 22.31 ? C8 FAD 401 A 1 HETATM 36 C C8M FAD . . . B 2 64.7 21.201 52.817 1 21.54 ? C8M FAD 401 A 1 HETATM 37 C C9 FAD . . . B 2 66.284 21.317 51.074 1 24.2 ? C9 FAD 401 A 1 HETATM 38 C C9A FAD . . . B 2 67.581 21.763 50.347 1 23.91 ? C9A FAD 401 A 1 HETATM 39 N N10 FAD . . . B 2 68.021 21.347 48.863 1 24.06 ? N10 FAD 401 A 1 HETATM 40 C C10 FAD . . . B 2 69.319 21.867 48.246 1 23.81 ? C10 FAD 401 A 1 HETATM 41 C C1' FAD . . . B 2 67.057 20.469 48.207 1 19.71 ? C1' FAD 401 A 1 HETATM 42 C C2' FAD . . . B 2 67.5 19.032 48.263 1 18.23 ? C2' FAD 401 A 1 HETATM 43 O O2' FAD . . . B 2 68.718 18.72 47.644 1 21.12 ? O2' FAD 401 A 1 HETATM 44 C C3' FAD . . . B 2 66.286 18.318 47.524 1 17.05 ? C3' FAD 401 A 1 HETATM 45 O O3' FAD . . . B 2 65.078 18.416 48.499 1 16.56 ? O3' FAD 401 A 1 HETATM 46 C C4' FAD . . . B 2 66.434 16.723 47.414 1 15.5 ? C4' FAD 401 A 1 HETATM 47 O O4' FAD . . . B 2 67.579 16.296 46.501 1 19.75 ? O4' FAD 401 A 1 HETATM 48 C C5' FAD . . . B 2 65.23 16.141 46.669 1 15.5 ? C5' FAD 401 A 1 HETATM 49 O O5' FAD . . . B 2 63.912 16.209 47.006 1 17.26 ? O5' FAD 401 A 1 HETATM 50 P P FAD . . . B 2 62.793 17.193 46.51 1 22.12 ? P FAD 401 A 1 HETATM 51 O O1P FAD . . . B 2 62.565 18.253 47.515 1 18.41 ? O1P FAD 401 A 1 HETATM 52 O O2P FAD . . . B 2 62.919 17.687 45.133 1 21.63 ? O2P FAD 401 A 1 HETATM 53 O O3P FAD . . . B 2 61.571 16.209 46.468 1 21.4 ? O3P FAD 401 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #