data_2R0W # _model_server_result.job_id hmkOOuTl2t1p4ojafmqaJA _model_server_result.datetime_utc '2024-10-12 13:24:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":214}' # _entry.id 2R0W # _exptl.entry_id 2R0W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 92.51 _cell.angle_beta 94.96 _cell.angle_gamma 90.55 _cell.entry_id 2R0W _cell.length_a 42.793 _cell.length_b 43.327 _cell.length_c 58.456 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf2 A SG CYS 139 L CYS 133 1_555 A SG CYS 199 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 97 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 150 H CYS 140 1_555 B SG CYS 205 H CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2R0W _atom_sites.fract_transf_matrix[1][1] 0.023368 _atom_sites.fract_transf_matrix[1][2] 0.000224 _atom_sites.fract_transf_matrix[1][3] 0.00204 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023081 _atom_sites.fract_transf_matrix[2][3] 0.001035 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA L 1 214 1 NA NA . E 5 HOH L 1 215 1 HOH HOH . E 5 HOH L 2 216 4 HOH HOH . E 5 HOH L 3 217 7 HOH HOH . E 5 HOH L 4 218 8 HOH HOH . E 5 HOH L 5 219 9 HOH HOH . E 5 HOH L 6 220 12 HOH HOH . E 5 HOH L 7 221 15 HOH HOH . E 5 HOH L 8 222 16 HOH HOH . E 5 HOH L 9 223 18 HOH HOH . E 5 HOH L 10 224 19 HOH HOH . E 5 HOH L 11 225 20 HOH HOH . E 5 HOH L 12 226 21 HOH HOH . E 5 HOH L 13 227 23 HOH HOH . E 5 HOH L 14 228 28 HOH HOH . E 5 HOH L 15 229 29 HOH HOH . E 5 HOH L 16 230 30 HOH HOH . E 5 HOH L 17 231 32 HOH HOH . E 5 HOH L 18 232 34 HOH HOH . E 5 HOH L 19 233 35 HOH HOH . E 5 HOH L 20 234 39 HOH HOH . E 5 HOH L 21 235 41 HOH HOH . E 5 HOH L 22 236 45 HOH HOH . E 5 HOH L 23 237 46 HOH HOH . E 5 HOH L 24 238 49 HOH HOH . E 5 HOH L 25 239 50 HOH HOH . E 5 HOH L 26 240 51 HOH HOH . E 5 HOH L 27 241 53 HOH HOH . E 5 HOH L 28 242 54 HOH HOH . E 5 HOH L 29 243 58 HOH HOH . E 5 HOH L 30 244 59 HOH HOH . E 5 HOH L 31 245 60 HOH HOH . F 5 HOH H 1 214 2 HOH HOH . F 5 HOH H 2 215 3 HOH HOH . F 5 HOH H 3 216 5 HOH HOH . F 5 HOH H 4 217 6 HOH HOH . F 5 HOH H 5 218 10 HOH HOH . F 5 HOH H 6 219 11 HOH HOH . F 5 HOH H 7 220 13 HOH HOH . F 5 HOH H 8 221 14 HOH HOH . F 5 HOH H 9 222 17 HOH HOH . F 5 HOH H 10 223 22 HOH HOH . F 5 HOH H 11 224 24 HOH HOH . F 5 HOH H 12 225 25 HOH HOH . F 5 HOH H 13 226 26 HOH HOH . F 5 HOH H 14 227 27 HOH HOH . F 5 HOH H 15 228 31 HOH HOH . F 5 HOH H 16 229 33 HOH HOH . F 5 HOH H 17 230 36 HOH HOH . F 5 HOH H 18 231 37 HOH HOH . F 5 HOH H 19 232 38 HOH HOH . F 5 HOH H 20 233 40 HOH HOH . F 5 HOH H 21 234 42 HOH HOH . F 5 HOH H 22 235 43 HOH HOH . F 5 HOH H 23 236 44 HOH HOH . F 5 HOH H 24 237 47 HOH HOH . F 5 HOH H 25 238 48 HOH HOH . F 5 HOH H 26 239 52 HOH HOH . F 5 HOH H 27 240 55 HOH HOH . F 5 HOH H 28 241 56 HOH HOH . F 5 HOH H 29 242 57 HOH HOH . F 5 HOH H 30 243 62 HOH HOH . F 5 HOH H 31 244 63 HOH HOH . G 5 HOH Q 1 61 61 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 8.677 _atom_site.Cartn_y 10.428 _atom_site.Cartn_z 15.371 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 214 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #