data_2R1L # _model_server_result.job_id N3fu22p4eihSFEZqOr2vJQ _model_server_result.datetime_utc '2024-11-13 00:28:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r1l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":800}' # _entry.id 2R1L # _exptl.entry_id 2R1L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2R1L _cell.length_a 108.923 _cell.length_b 108.923 _cell.length_c 62.647 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R1L _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 136 A ILE 168 1_555 A N KCX 137 A KCX 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale2 A C KCX 137 A KCX 169 1_555 A N VAL 138 A VAL 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? metalc ? metalc1 D O4 DPJ . A DPJ 1 1_555 B FE FE2 . A FE2 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc2 D O4 DPJ . A DPJ 1 1_555 C CO CO . A CO 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc3 A NE2 HIS 23 A HIS 55 1_555 B FE FE2 . A FE2 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc4 A NE2 HIS 25 A HIS 57 1_555 B FE FE2 . A FE2 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc5 A OQ1 KCX 137 A KCX 169 1_555 B FE FE2 . A FE2 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc6 A OQ2 KCX 137 A KCX 169 1_555 C CO CO . A CO 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc7 A ND1 HIS 169 A HIS 201 1_555 C CO CO . A CO 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc8 A NE2 HIS 198 A HIS 230 1_555 C CO CO . A CO 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc9 A OD1 ASP 269 A ASP 301 1_555 B FE FE2 . A FE2 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2R1L _atom_sites.fract_transf_matrix[1][1] 0.009181 _atom_sites.fract_transf_matrix[1][2] 0.005301 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 A 1 800 800 FE2 FE . C 3 CO A 1 801 801 CO CO . D 4 DPJ A 1 1 1 DPJ DPS . E 5 EDO A 1 701 701 EDO EDO . F 6 HOH A 1 802 2 HOH HOH . F 6 HOH A 2 803 3 HOH HOH . F 6 HOH A 3 804 4 HOH HOH . F 6 HOH A 4 805 5 HOH HOH . F 6 HOH A 5 806 6 HOH HOH . F 6 HOH A 6 807 7 HOH HOH . F 6 HOH A 7 808 8 HOH HOH . F 6 HOH A 8 809 9 HOH HOH . F 6 HOH A 9 810 10 HOH HOH . F 6 HOH A 10 811 11 HOH HOH . F 6 HOH A 11 812 12 HOH HOH . F 6 HOH A 12 813 13 HOH HOH . F 6 HOH A 13 814 14 HOH HOH . F 6 HOH A 14 815 15 HOH HOH . F 6 HOH A 15 816 16 HOH HOH . F 6 HOH A 16 817 17 HOH HOH . F 6 HOH A 17 818 18 HOH HOH . F 6 HOH A 18 819 19 HOH HOH . F 6 HOH A 19 820 20 HOH HOH . F 6 HOH A 20 821 21 HOH HOH . F 6 HOH A 21 822 22 HOH HOH . F 6 HOH A 22 823 23 HOH HOH . F 6 HOH A 23 824 24 HOH HOH . F 6 HOH A 24 825 25 HOH HOH . F 6 HOH A 25 826 26 HOH HOH . F 6 HOH A 26 827 27 HOH HOH . F 6 HOH A 27 828 28 HOH HOH . F 6 HOH A 28 829 29 HOH HOH . F 6 HOH A 29 830 30 HOH HOH . F 6 HOH A 30 831 31 HOH HOH . F 6 HOH A 31 832 32 HOH HOH . F 6 HOH A 32 833 33 HOH HOH . F 6 HOH A 33 834 34 HOH HOH . F 6 HOH A 34 835 35 HOH HOH . F 6 HOH A 35 836 36 HOH HOH . F 6 HOH A 36 837 37 HOH HOH . F 6 HOH A 37 838 38 HOH HOH . F 6 HOH A 38 839 39 HOH HOH . F 6 HOH A 39 840 40 HOH HOH . F 6 HOH A 40 841 41 HOH HOH . F 6 HOH A 41 842 42 HOH HOH . F 6 HOH A 42 843 43 HOH HOH . F 6 HOH A 43 844 44 HOH HOH . F 6 HOH A 44 845 45 HOH HOH . F 6 HOH A 45 846 46 HOH HOH . F 6 HOH A 46 847 47 HOH HOH . F 6 HOH A 47 848 48 HOH HOH . F 6 HOH A 48 849 49 HOH HOH . F 6 HOH A 49 850 50 HOH HOH . F 6 HOH A 50 851 51 HOH HOH . F 6 HOH A 51 852 52 HOH HOH . F 6 HOH A 52 853 53 HOH HOH . F 6 HOH A 53 854 54 HOH HOH . F 6 HOH A 54 855 55 HOH HOH . F 6 HOH A 55 856 56 HOH HOH . F 6 HOH A 56 857 57 HOH HOH . F 6 HOH A 57 858 58 HOH HOH . F 6 HOH A 58 859 59 HOH HOH . F 6 HOH A 59 860 60 HOH HOH . F 6 HOH A 60 861 61 HOH HOH . F 6 HOH A 61 862 62 HOH HOH . F 6 HOH A 62 863 63 HOH HOH . F 6 HOH A 63 864 64 HOH HOH . F 6 HOH A 64 865 65 HOH HOH . F 6 HOH A 65 866 66 HOH HOH . F 6 HOH A 66 867 67 HOH HOH . F 6 HOH A 67 868 68 HOH HOH . F 6 HOH A 68 869 69 HOH HOH . F 6 HOH A 69 870 70 HOH HOH . F 6 HOH A 70 871 71 HOH HOH . F 6 HOH A 71 872 72 HOH HOH . F 6 HOH A 72 873 73 HOH HOH . F 6 HOH A 73 874 74 HOH HOH . F 6 HOH A 74 875 75 HOH HOH . F 6 HOH A 75 876 76 HOH HOH . F 6 HOH A 76 877 77 HOH HOH . F 6 HOH A 77 878 78 HOH HOH . F 6 HOH A 78 879 79 HOH HOH . F 6 HOH A 79 880 80 HOH HOH . F 6 HOH A 80 881 81 HOH HOH . F 6 HOH A 81 882 82 HOH HOH . F 6 HOH A 82 883 83 HOH HOH . F 6 HOH A 83 884 84 HOH HOH . F 6 HOH A 84 885 85 HOH HOH . F 6 HOH A 85 886 86 HOH HOH . F 6 HOH A 86 887 87 HOH HOH . F 6 HOH A 87 888 88 HOH HOH . F 6 HOH A 88 889 89 HOH HOH . F 6 HOH A 89 890 90 HOH HOH . F 6 HOH A 90 891 91 HOH HOH . F 6 HOH A 91 892 92 HOH HOH . F 6 HOH A 92 893 93 HOH HOH . F 6 HOH A 93 894 94 HOH HOH . F 6 HOH A 94 895 95 HOH HOH . F 6 HOH A 95 896 96 HOH HOH . F 6 HOH A 96 897 97 HOH HOH . F 6 HOH A 97 898 98 HOH HOH . F 6 HOH A 98 899 99 HOH HOH . F 6 HOH A 99 900 101 HOH HOH . F 6 HOH A 100 901 102 HOH HOH . F 6 HOH A 101 902 103 HOH HOH . F 6 HOH A 102 903 104 HOH HOH . F 6 HOH A 103 904 105 HOH HOH . F 6 HOH A 104 905 106 HOH HOH . F 6 HOH A 105 906 107 HOH HOH . F 6 HOH A 106 907 108 HOH HOH . F 6 HOH A 107 908 109 HOH HOH . F 6 HOH A 108 909 110 HOH HOH . F 6 HOH A 109 910 111 HOH HOH . F 6 HOH A 110 911 112 HOH HOH . F 6 HOH A 111 912 113 HOH HOH . F 6 HOH A 112 913 114 HOH HOH . F 6 HOH A 113 914 115 HOH HOH . F 6 HOH A 114 915 116 HOH HOH . F 6 HOH A 115 916 117 HOH HOH . F 6 HOH A 116 917 118 HOH HOH . F 6 HOH A 117 918 119 HOH HOH . F 6 HOH A 118 919 121 HOH HOH . F 6 HOH A 119 920 122 HOH HOH . F 6 HOH A 120 921 123 HOH HOH . F 6 HOH A 121 922 124 HOH HOH . F 6 HOH A 122 923 125 HOH HOH . F 6 HOH A 123 924 126 HOH HOH . F 6 HOH A 124 925 127 HOH HOH . F 6 HOH A 125 926 128 HOH HOH . F 6 HOH A 126 927 129 HOH HOH . F 6 HOH A 127 928 130 HOH HOH . F 6 HOH A 128 929 131 HOH HOH . F 6 HOH A 129 930 132 HOH HOH . F 6 HOH A 130 931 133 HOH HOH . F 6 HOH A 131 932 135 HOH HOH . F 6 HOH A 132 933 136 HOH HOH . F 6 HOH A 133 934 137 HOH HOH . F 6 HOH A 134 935 139 HOH HOH . F 6 HOH A 135 936 140 HOH HOH . F 6 HOH A 136 937 141 HOH HOH . F 6 HOH A 137 938 143 HOH HOH . F 6 HOH A 138 939 144 HOH HOH . F 6 HOH A 139 940 145 HOH HOH . F 6 HOH A 140 941 146 HOH HOH . F 6 HOH A 141 942 148 HOH HOH . F 6 HOH A 142 943 149 HOH HOH . F 6 HOH A 143 944 150 HOH HOH . F 6 HOH A 144 945 151 HOH HOH . F 6 HOH A 145 946 152 HOH HOH . F 6 HOH A 146 947 153 HOH HOH . F 6 HOH A 147 948 154 HOH HOH . F 6 HOH A 148 949 155 HOH HOH . F 6 HOH A 149 950 156 HOH HOH . F 6 HOH A 150 951 157 HOH HOH . F 6 HOH A 151 952 158 HOH HOH . F 6 HOH A 152 953 159 HOH HOH . F 6 HOH A 153 954 160 HOH HOH . F 6 HOH A 154 955 161 HOH HOH . F 6 HOH A 155 956 163 HOH HOH . F 6 HOH A 156 957 164 HOH HOH . F 6 HOH A 157 958 165 HOH HOH . F 6 HOH A 158 959 167 HOH HOH . F 6 HOH A 159 960 168 HOH HOH . F 6 HOH A 160 961 169 HOH HOH . F 6 HOH A 161 962 170 HOH HOH . F 6 HOH A 162 963 171 HOH HOH . F 6 HOH A 163 964 173 HOH HOH . F 6 HOH A 164 965 174 HOH HOH . F 6 HOH A 165 966 175 HOH HOH . F 6 HOH A 166 967 176 HOH HOH . F 6 HOH A 167 968 177 HOH HOH . F 6 HOH A 168 969 178 HOH HOH . F 6 HOH A 169 970 179 HOH HOH . F 6 HOH A 170 971 180 HOH HOH . F 6 HOH A 171 972 181 HOH HOH . F 6 HOH A 172 973 182 HOH HOH . F 6 HOH A 173 974 183 HOH HOH . F 6 HOH A 174 975 185 HOH HOH . F 6 HOH A 175 976 186 HOH HOH . F 6 HOH A 176 977 187 HOH HOH . F 6 HOH A 177 978 188 HOH HOH . F 6 HOH A 178 979 189 HOH HOH . F 6 HOH A 179 980 190 HOH HOH . F 6 HOH A 180 981 191 HOH HOH . F 6 HOH A 181 982 192 HOH HOH . F 6 HOH A 182 983 193 HOH HOH . F 6 HOH A 183 984 195 HOH HOH . F 6 HOH A 184 985 196 HOH HOH . F 6 HOH A 185 986 197 HOH HOH . F 6 HOH A 186 987 198 HOH HOH . F 6 HOH A 187 988 199 HOH HOH . F 6 HOH A 188 989 200 HOH HOH . F 6 HOH A 189 990 201 HOH HOH . F 6 HOH A 190 991 202 HOH HOH . F 6 HOH A 191 992 203 HOH HOH . F 6 HOH A 192 993 205 HOH HOH . F 6 HOH A 193 994 206 HOH HOH . F 6 HOH A 194 995 207 HOH HOH . F 6 HOH A 195 996 209 HOH HOH . F 6 HOH A 196 997 210 HOH HOH . F 6 HOH A 197 998 211 HOH HOH . F 6 HOH A 198 999 212 HOH HOH . F 6 HOH A 199 1000 213 HOH HOH . F 6 HOH A 200 1001 214 HOH HOH . F 6 HOH A 201 1002 215 HOH HOH . F 6 HOH A 202 1003 218 HOH HOH . F 6 HOH A 203 1004 220 HOH HOH . F 6 HOH A 204 1005 221 HOH HOH . F 6 HOH A 205 1006 222 HOH HOH . F 6 HOH A 206 1007 223 HOH HOH . F 6 HOH A 207 1008 224 HOH HOH . F 6 HOH A 208 1009 227 HOH HOH . F 6 HOH A 209 1010 228 HOH HOH . F 6 HOH A 210 1011 230 HOH HOH . F 6 HOH A 211 1012 231 HOH HOH . F 6 HOH A 212 1013 232 HOH HOH . F 6 HOH A 213 1014 234 HOH HOH . F 6 HOH A 214 1015 235 HOH HOH . F 6 HOH A 215 1016 237 HOH HOH . F 6 HOH A 216 1017 238 HOH HOH . F 6 HOH A 217 1018 241 HOH HOH . F 6 HOH A 218 1019 242 HOH HOH . F 6 HOH A 219 1020 243 HOH HOH . F 6 HOH A 220 1021 244 HOH HOH . F 6 HOH A 221 1022 246 HOH HOH . F 6 HOH A 222 1023 247 HOH HOH . F 6 HOH A 223 1024 254 HOH HOH . F 6 HOH A 224 1025 255 HOH HOH . F 6 HOH A 225 1026 256 HOH HOH . F 6 HOH A 226 1027 259 HOH HOH . F 6 HOH A 227 1028 260 HOH HOH . F 6 HOH A 228 1029 261 HOH HOH . F 6 HOH A 229 1030 262 HOH HOH . F 6 HOH A 230 1031 263 HOH HOH . F 6 HOH A 231 1032 264 HOH HOH . F 6 HOH A 232 1033 265 HOH HOH . F 6 HOH A 233 1034 266 HOH HOH . F 6 HOH A 234 1035 267 HOH HOH . F 6 HOH A 235 1036 268 HOH HOH . F 6 HOH A 236 1037 272 HOH HOH . F 6 HOH A 237 1038 273 HOH HOH . F 6 HOH A 238 1039 274 HOH HOH . F 6 HOH A 239 1040 275 HOH HOH . F 6 HOH A 240 1041 276 HOH HOH . F 6 HOH A 241 1042 278 HOH HOH . F 6 HOH A 242 1043 279 HOH HOH . F 6 HOH A 243 1044 281 HOH HOH . F 6 HOH A 244 1045 283 HOH HOH . F 6 HOH A 245 1046 284 HOH HOH . F 6 HOH A 246 1047 286 HOH HOH . F 6 HOH A 247 1048 287 HOH HOH . F 6 HOH A 248 1049 291 HOH HOH . F 6 HOH A 249 1050 292 HOH HOH . F 6 HOH A 250 1051 294 HOH HOH . F 6 HOH A 251 1052 295 HOH HOH . F 6 HOH A 252 1053 297 HOH HOH . F 6 HOH A 253 1054 298 HOH HOH . F 6 HOH A 254 1055 299 HOH HOH . F 6 HOH A 255 1056 300 HOH HOH . F 6 HOH A 256 1057 301 HOH HOH . F 6 HOH A 257 1058 302 HOH HOH . F 6 HOH A 258 1059 304 HOH HOH . F 6 HOH A 259 1060 305 HOH HOH . F 6 HOH A 260 1061 306 HOH HOH . F 6 HOH A 261 1062 307 HOH HOH . F 6 HOH A 262 1063 308 HOH HOH . F 6 HOH A 263 1064 309 HOH HOH . F 6 HOH A 264 1065 310 HOH HOH . F 6 HOH A 265 1066 311 HOH HOH . F 6 HOH A 266 1067 313 HOH HOH . F 6 HOH A 267 1068 314 HOH HOH . F 6 HOH A 268 1069 315 HOH HOH . F 6 HOH A 269 1070 316 HOH HOH . F 6 HOH A 270 1071 318 HOH HOH . F 6 HOH A 271 1072 319 HOH HOH . F 6 HOH A 272 1073 320 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 31.347 _atom_site.Cartn_y 21.422 _atom_site.Cartn_z -3.552 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 12.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 800 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #