data_2R2M # _model_server_result.job_id QjCsBQFEU0vJNCt8wuzhbw _model_server_result.datetime_utc '2024-12-27 00:52:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r2m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":5000}' # _entry.id 2R2M # _exptl.entry_id 2R2M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.851 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[2-({[amino(imino)methyl]amino}oxy)ethyl]-2-{6-chloro-3-[(2,2-difluoro-2-phenylethyl)amino]-2-fluorophenyl}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.64 _cell.angle_gamma 90 _cell.entry_id 2R2M _cell.length_a 70.95 _cell.length_b 72.135 _cell.length_c 72.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R2M _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 9 1_555 B SG CYS 119 B CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 B SG CYS 28 B CYS 64 1_555 B SG CYS 44 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 B SG CYS 173 B CYS 203 1_555 B SG CYS 187 B CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf4 B SG CYS 201 B CYS 231 1_555 B SG CYS 231 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'C19 H21 Cl F3 N5 O2' _chem_comp.formula_weight 443.851 _chem_comp.id I50 _chem_comp.mon_nstd_flag . _chem_comp.name N-[2-({[amino(imino)methyl]amino}oxy)ethyl]-2-{6-chloro-3-[(2,2-difluoro-2-phenylethyl)amino]-2-fluorophenyl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL18 C17 I50 sing 152 n n O10 C9 I50 doub 153 n n C9 C11 I50 sing 154 n n C9 N8 I50 sing 155 n n C7 N8 I50 sing 156 n n C7 C6 I50 sing 157 n n C11 C12 I50 sing 158 n n C17 C12 I50 doub 159 n y C17 C16 I50 sing 160 n y C12 C13 I50 sing 161 n y C6 O5 I50 sing 162 n n C16 C15 I50 doub 163 n y C13 F19 I50 sing 164 n n C13 C14 I50 doub 165 n y C15 C14 I50 sing 166 n y O5 N4 I50 sing 167 n n C14 N20 I50 sing 168 n n N4 C1 I50 sing 169 n n C1 N3 I50 sing 170 n n C1 N2 I50 doub 171 n n N20 C21 I50 sing 172 n n C21 C24 I50 sing 173 n n C27 C26 I50 doub 174 n y C27 C28 I50 sing 175 n y C26 C25 I50 sing 176 n y C28 C29 I50 doub 177 n y C25 C24 I50 sing 178 n n C25 C30 I50 doub 179 n y C29 C30 I50 sing 180 n y C24 F32 I50 sing 181 n n C24 F31 I50 sing 182 n n C7 H71 I50 sing 183 n n C7 H72 I50 sing 184 n n C11 H111 I50 sing 185 n n C11 H112 I50 sing 186 n n C15 H15 I50 sing 187 n n C16 H16 I50 sing 188 n n C21 H211 I50 sing 189 n n C21 H212 I50 sing 190 n n C27 H27 I50 sing 191 n n C30 H30 I50 sing 192 n n N2 HN2 I50 sing 193 n n N3 HN31 I50 sing 194 n n N3 HN32 I50 sing 195 n n N4 HN4 I50 sing 196 n n C6 H61 I50 sing 197 n n C6 H62 I50 sing 198 n n N8 HN8 I50 sing 199 n n N20 HN20 I50 sing 200 n n C26 H26 I50 sing 201 n n C28 H28 I50 sing 202 n n C29 H29 I50 sing 203 n n # _atom_sites.entry_id 2R2M _atom_sites.fract_transf_matrix[1][1] 0.014094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002648 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 I50 B 1 5000 5000 I50 I50 . E 5 HOH A 1 33 33 HOH HOH . E 5 HOH A 2 34 34 HOH HOH . E 5 HOH A 3 35 35 HOH HOH . E 5 HOH A 4 36 36 HOH HOH . E 5 HOH A 5 37 37 HOH HOH . E 5 HOH A 6 38 38 HOH HOH . E 5 HOH A 7 39 39 HOH HOH . E 5 HOH A 8 40 40 HOH HOH . E 5 HOH A 9 41 41 HOH HOH . E 5 HOH A 10 42 42 HOH HOH . E 5 HOH A 11 43 43 HOH HOH . E 5 HOH A 12 44 44 HOH HOH . F 5 HOH B 1 5001 5001 HOH HOH . F 5 HOH B 2 5002 5002 HOH HOH . F 5 HOH B 3 5003 5003 HOH HOH . F 5 HOH B 4 5004 5004 HOH HOH . F 5 HOH B 5 5005 5005 HOH HOH . F 5 HOH B 6 5006 5006 HOH HOH . F 5 HOH B 7 5007 5007 HOH HOH . F 5 HOH B 8 5008 5008 HOH HOH . F 5 HOH B 9 5009 5009 HOH HOH . F 5 HOH B 10 5010 5010 HOH HOH . F 5 HOH B 11 5011 5011 HOH HOH . F 5 HOH B 12 5012 5012 HOH HOH . F 5 HOH B 13 5013 5013 HOH HOH . F 5 HOH B 14 5014 5014 HOH HOH . F 5 HOH B 15 5015 5015 HOH HOH . F 5 HOH B 16 5016 5016 HOH HOH . F 5 HOH B 17 5017 5017 HOH HOH . F 5 HOH B 18 5018 5018 HOH HOH . F 5 HOH B 19 5019 5019 HOH HOH . F 5 HOH B 20 5020 5020 HOH HOH . F 5 HOH B 21 5021 5021 HOH HOH . F 5 HOH B 22 5022 5022 HOH HOH . F 5 HOH B 23 5023 5023 HOH HOH . F 5 HOH B 24 5024 5024 HOH HOH . F 5 HOH B 25 5025 5025 HOH HOH . F 5 HOH B 26 5026 5026 HOH HOH . F 5 HOH B 27 5027 5027 HOH HOH . F 5 HOH B 28 5028 5028 HOH HOH . F 5 HOH B 29 5029 5029 HOH HOH . F 5 HOH B 30 5030 5030 HOH HOH . F 5 HOH B 31 5031 5031 HOH HOH . F 5 HOH B 32 5032 5032 HOH HOH . F 5 HOH B 33 5033 5033 HOH HOH . F 5 HOH B 34 5034 5034 HOH HOH . F 5 HOH B 35 5035 5035 HOH HOH . F 5 HOH B 36 5036 5036 HOH HOH . F 5 HOH B 37 5037 5037 HOH HOH . F 5 HOH B 38 5038 5038 HOH HOH . F 5 HOH B 39 5039 5039 HOH HOH . F 5 HOH B 40 5040 5040 HOH HOH . F 5 HOH B 41 5041 5041 HOH HOH . F 5 HOH B 42 5042 5042 HOH HOH . F 5 HOH B 43 5043 5043 HOH HOH . F 5 HOH B 44 5044 5044 HOH HOH . F 5 HOH B 45 5045 5045 HOH HOH . F 5 HOH B 46 5046 5046 HOH HOH . F 5 HOH B 47 5047 5047 HOH HOH . F 5 HOH B 48 5048 5048 HOH HOH . F 5 HOH B 49 5049 5049 HOH HOH . F 5 HOH B 50 5050 5050 HOH HOH . F 5 HOH B 51 5051 5051 HOH HOH . F 5 HOH B 52 5052 5052 HOH HOH . F 5 HOH B 53 5053 5053 HOH HOH . F 5 HOH B 54 5054 5054 HOH HOH . F 5 HOH B 55 5055 5055 HOH HOH . F 5 HOH B 56 5056 5056 HOH HOH . F 5 HOH B 57 5057 5057 HOH HOH . F 5 HOH B 58 5058 5058 HOH HOH . F 5 HOH B 59 5059 5059 HOH HOH . F 5 HOH B 60 5060 5060 HOH HOH . F 5 HOH B 61 5061 5061 HOH HOH . F 5 HOH B 62 5062 5062 HOH HOH . F 5 HOH B 63 5063 5063 HOH HOH . F 5 HOH B 64 5064 5064 HOH HOH . F 5 HOH B 65 5065 5065 HOH HOH . F 5 HOH B 66 5066 5066 HOH HOH . F 5 HOH B 67 5067 5067 HOH HOH . F 5 HOH B 68 5068 5068 HOH HOH . F 5 HOH B 69 5069 5069 HOH HOH . F 5 HOH B 70 5070 5070 HOH HOH . F 5 HOH B 71 5071 5071 HOH HOH . F 5 HOH B 72 5072 5072 HOH HOH . F 5 HOH B 73 5073 5073 HOH HOH . F 5 HOH B 74 5074 5074 HOH HOH . F 5 HOH B 75 5075 5075 HOH HOH . F 5 HOH B 76 5076 5076 HOH HOH . F 5 HOH B 77 5077 5077 HOH HOH . F 5 HOH B 78 5078 5078 HOH HOH . F 5 HOH B 79 5079 5079 HOH HOH . F 5 HOH B 80 5080 5080 HOH HOH . F 5 HOH B 81 5081 5081 HOH HOH . F 5 HOH B 82 5082 5082 HOH HOH . F 5 HOH B 83 5083 5083 HOH HOH . F 5 HOH B 84 5084 5084 HOH HOH . F 5 HOH B 85 5085 5085 HOH HOH . F 5 HOH B 86 5086 5086 HOH HOH . F 5 HOH B 87 5087 5087 HOH HOH . F 5 HOH B 88 5088 5088 HOH HOH . F 5 HOH B 89 5089 5089 HOH HOH . F 5 HOH B 90 5090 5090 HOH HOH . F 5 HOH B 91 5091 5091 HOH HOH . F 5 HOH B 92 5092 5092 HOH HOH . F 5 HOH B 93 5093 5093 HOH HOH . F 5 HOH B 94 5094 5094 HOH HOH . F 5 HOH B 95 5095 5095 HOH HOH . F 5 HOH B 96 5096 5096 HOH HOH . F 5 HOH B 97 5097 5097 HOH HOH . F 5 HOH B 98 5098 5098 HOH HOH . F 5 HOH B 99 5099 5099 HOH HOH . F 5 HOH B 100 5100 5100 HOH HOH . F 5 HOH B 101 5101 5101 HOH HOH . F 5 HOH B 102 5102 5102 HOH HOH . F 5 HOH B 103 5103 5103 HOH HOH . F 5 HOH B 104 5104 5104 HOH HOH . F 5 HOH B 105 5105 5105 HOH HOH . F 5 HOH B 106 5106 5106 HOH HOH . F 5 HOH B 107 5107 5107 HOH HOH . F 5 HOH B 108 5108 5108 HOH HOH . F 5 HOH B 109 5109 5109 HOH HOH . F 5 HOH B 110 5110 5110 HOH HOH . F 5 HOH B 111 5111 5111 HOH HOH . F 5 HOH B 112 5112 5112 HOH HOH . F 5 HOH B 113 5113 5113 HOH HOH . F 5 HOH B 114 5114 5114 HOH HOH . F 5 HOH B 115 5115 5115 HOH HOH . F 5 HOH B 116 5116 5116 HOH HOH . F 5 HOH B 117 5117 5117 HOH HOH . F 5 HOH B 118 5118 5118 HOH HOH . F 5 HOH B 119 5119 5119 HOH HOH . F 5 HOH B 120 5120 5120 HOH HOH . F 5 HOH B 121 5121 5121 HOH HOH . F 5 HOH B 122 5122 5122 HOH HOH . G 5 HOH H 1 301 301 HOH HOH . G 5 HOH H 2 302 302 HOH HOH . G 5 HOH H 3 303 303 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 I50 . . . D 4 11.282 -11.893 24.144 1 22.55 ? C1 I50 5000 B 1 HETATM 2 O O5 I50 . . . D 4 12.832 -10.821 22.809 1 19.89 ? O5 I50 5000 B 1 HETATM 3 C C7 I50 . . . D 4 13.596 -11.628 20.712 1 20.6 ? C7 I50 5000 B 1 HETATM 4 C C9 I50 . . . D 4 15.911 -12.625 20.643 1 25.1 ? C9 I50 5000 B 1 HETATM 5 C C11 I50 . . . D 4 17.429 -12.468 20.738 1 25.75 ? C11 I50 5000 B 1 HETATM 6 C C12 I50 . . . D 4 18.05 -13.686 21.432 1 24.24 ? C12 I50 5000 B 1 HETATM 7 C C13 I50 . . . D 4 17.389 -14.375 22.477 1 21.58 ? C13 I50 5000 B 1 HETATM 8 C C14 I50 . . . D 4 18.01 -15.482 23.083 1 22.97 ? C14 I50 5000 B 1 HETATM 9 C C15 I50 . . . D 4 19.298 -15.911 22.654 1 27.51 ? C15 I50 5000 B 1 HETATM 10 C C16 I50 . . . D 4 19.961 -15.227 21.618 1 27.8 ? C16 I50 5000 B 1 HETATM 11 C C21 I50 . . . D 4 17.992 -17.4 24.685 1 27.6 ? C21 I50 5000 B 1 HETATM 12 C C24 I50 . . . D 4 18.595 -17.103 26.071 1 29.56 ? C24 I50 5000 B 1 HETATM 13 C C27 I50 . . . D 4 22.229 -15.983 25.34 1 28.12 ? C27 I50 5000 B 1 HETATM 14 C C30 I50 . . . D 4 19.777 -14.832 26.172 1 24.92 ? C30 I50 5000 B 1 HETATM 15 N N2 I50 . . . D 4 11.094 -10.758 24.654 1 25.85 ? N2 I50 5000 B 1 HETATM 16 N N3 I50 . . . D 4 10.304 -12.949 24.333 1 21.76 ? N3 I50 5000 B 1 HETATM 17 N N4 I50 . . . D 4 12.353 -12.083 23.185 1 20.47 ? N4 I50 5000 B 1 HETATM 18 C C6 I50 . . . D 4 12.915 -10.474 21.453 1 23.17 ? C6 I50 5000 B 1 HETATM 19 N N8 I50 . . . D 4 15.038 -11.486 20.898 1 26.56 ? N8 I50 5000 B 1 HETATM 20 O O10 I50 . . . D 4 15.467 -13.605 20.146 1 26.6 ? O10 I50 5000 B 1 HETATM 21 C C17 I50 . . . D 4 19.334 -14.117 21.009 1 29.21 ? C17 I50 5000 B 1 HETATM 22 CL CL18 I50 . . . D 4 20.161 -13.243 19.696 1 30.73 ? CL18 I50 5000 B 1 HETATM 23 F F19 I50 . . . D 4 16.163 -13.977 22.916 1 24.54 ? F19 I50 5000 B 1 HETATM 24 N N20 I50 . . . D 4 17.349 -16.196 24.172 1 26.95 ? N20 I50 5000 B 1 HETATM 25 C C25 I50 . . . D 4 19.858 -16.229 25.915 1 27.78 ? C25 I50 5000 B 1 HETATM 26 C C26 I50 . . . D 4 21.088 -16.797 25.493 1 28.61 ? C26 I50 5000 B 1 HETATM 27 C C28 I50 . . . D 4 22.147 -14.589 25.597 1 28.68 ? C28 I50 5000 B 1 HETATM 28 C C29 I50 . . . D 4 20.916 -14.02 26.016 1 28.07 ? C29 I50 5000 B 1 HETATM 29 F F31 I50 . . . D 4 17.669 -16.436 26.825 1 29.46 ? F31 I50 5000 B 1 HETATM 30 F F32 I50 . . . D 4 18.883 -18.303 26.648 1 32.53 ? F32 I50 5000 B 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 389 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #