data_2R2S # _model_server_result.job_id tyHEW6C0207nEo8sBFSTIg _model_server_result.datetime_utc '2025-02-05 17:55:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r2s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":8}' # _entry.id 2R2S # _exptl.entry_id 2R2S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R2S _cell.length_a 52.304 _cell.length_b 144.508 _cell.length_c 50.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R2S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 104.608 144.508 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D CO 3CO . B 3CO 8 1_555 E NH BLB . B BLB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc2 D CO 3CO . B 3CO 8 1_555 E NB BLB . B BLB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc3 D CO 3CO . B 3CO 8 1_555 E NJ BLB . B BLB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc4 D CO 3CO . B 3CO 8 1_555 E NG BLB . B BLB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? metalc ? metalc5 D CO 3CO . B 3CO 8 1_555 E NC BLB . B BLB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? hydrog WATSON-CRICK hydrog1 A N1 DA 1 B DA 1 1_555 B N3 DT 8 G DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 1 B DA 1 1_555 B O4 DT 8 G DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N3 DT 2 B DT 2 1_555 B N1 DA 7 G DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A O4 DT 2 B DT 2 1_555 B N6 DA 7 G DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N3 DT 3 B DT 3 1_555 B N1 DA 6 G DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O4 DT 3 B DT 3 1_555 B N6 DA 6 G DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 4 B DA 4 1_555 B N3 DT 5 G DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 4 B DA 4 1_555 B O4 DT 5 G DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 5 B DG 5 1_555 B N3 DC 4 G DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 5 B DG 5 1_555 B O2 DC 4 G DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 5 B DG 5 1_555 B N4 DC 4 G DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 6 B DT 6 1_555 B N1 DA 3 G DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 6 B DT 6 1_555 B N6 DA 3 G DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DT 7 B DT 7 1_555 B N1 DA 2 G DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O4 DT 7 B DT 7 1_555 B N6 DA 2 G DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_13_PAIR hydrog16 B N3 DT 1 G DT 9 1_555 B O2 DT 1 G DT 9 2_765 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_13_PAIR hydrog17 B O2 DT 1 G DT 9 1_555 B N3 DT 1 G DT 9 2_765 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co 3' _chem_comp.formula_weight 58.933 _chem_comp.id 3CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2R2S _atom_sites.fract_transf_matrix[1][1] 0.019119 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 3CO B 1 8 2 3CO 3CO . E 5 BLB B 1 9 1 BLB BLB . F 6 HOH B 1 13 13 HOH TIP . F 6 HOH B 2 22 22 HOH TIP . F 6 HOH B 3 23 23 HOH TIP . F 6 HOH B 4 25 25 HOH TIP . F 6 HOH B 5 31 31 HOH TIP . G 6 HOH G 1 1 1 HOH TIP . G 6 HOH G 2 19 19 HOH TIP . G 6 HOH G 3 40 40 HOH TIP . H 6 HOH A 1 279 2 HOH TIP . H 6 HOH A 2 280 3 HOH TIP . H 6 HOH A 3 281 4 HOH TIP . H 6 HOH A 4 282 5 HOH TIP . H 6 HOH A 5 283 6 HOH TIP . H 6 HOH A 6 284 7 HOH TIP . H 6 HOH A 7 285 8 HOH TIP . H 6 HOH A 8 286 9 HOH TIP . H 6 HOH A 9 287 10 HOH TIP . H 6 HOH A 10 288 11 HOH TIP . H 6 HOH A 11 289 12 HOH TIP . H 6 HOH A 12 290 14 HOH TIP . H 6 HOH A 13 291 15 HOH TIP . H 6 HOH A 14 292 16 HOH TIP . H 6 HOH A 15 293 17 HOH TIP . H 6 HOH A 16 294 18 HOH TIP . H 6 HOH A 17 295 20 HOH TIP . H 6 HOH A 18 296 21 HOH TIP . H 6 HOH A 19 297 24 HOH TIP . H 6 HOH A 20 298 26 HOH TIP . H 6 HOH A 21 299 28 HOH TIP . H 6 HOH A 22 300 30 HOH TIP . H 6 HOH A 23 301 32 HOH TIP . H 6 HOH A 24 302 33 HOH TIP . H 6 HOH A 25 303 34 HOH TIP . H 6 HOH A 26 304 35 HOH TIP . H 6 HOH A 27 305 36 HOH TIP . H 6 HOH A 28 306 37 HOH TIP . H 6 HOH A 29 307 39 HOH TIP . H 6 HOH A 30 308 41 HOH TIP . H 6 HOH A 31 309 42 HOH TIP . H 6 HOH A 32 310 43 HOH TIP . H 6 HOH A 33 311 44 HOH TIP . H 6 HOH A 34 312 46 HOH TIP . H 6 HOH A 35 313 47 HOH TIP . H 6 HOH A 36 314 48 HOH TIP . H 6 HOH A 37 315 49 HOH TIP . H 6 HOH A 38 316 50 HOH TIP . H 6 HOH A 39 317 51 HOH TIP . H 6 HOH A 40 318 52 HOH TIP . H 6 HOH A 41 319 54 HOH TIP . H 6 HOH A 42 320 55 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id 3CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 38.199 _atom_site.Cartn_y 70.651 _atom_site.Cartn_z 12.155 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 94.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id 3CO _atom_site.auth_seq_id 8 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #