data_2R2V
#
_model_server_result.job_id            EHOxwxWKEBzUag-XLUTm-Q 
_model_server_result.datetime_utc      '2024-11-04 22:52:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2r2v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":37}' 
#
_entry.id    2R2V 
#
_exptl.entry_id    2R2V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2R2V 
_cell.length_a            51.696 
_cell.length_b            51.696 
_cell.length_c            99.793 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2R2V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,N,O,R,S,T,U 1 1 
E,F,G,H,P,Q,V,W,X,Y 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C NE2 HIS 19 C HIS 19 1_555 I ZN ZN . C ZN 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc2 C OE2 GLU 23 C GLU 23 1_555 I ZN ZN . C ZN 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc3 I ZN ZN . C ZN 35 1_555 K O3 CIT . C CIT 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc4 I ZN ZN . C ZN 35 1_555 K O7 CIT . C CIT 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc5 I ZN ZN . C ZN 35 1_555 K O5 CIT . C CIT 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc6 I ZN ZN . C ZN 35 1_555 X O HOH . G HOH 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc7 D NE2 HIS 19 D HIS 19 1_555 L ZN ZN . D ZN 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc8 D OE2 GLU 23 D GLU 23 1_555 L ZN ZN . D ZN 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc9 L ZN ZN . D ZN 35 1_555 O O5 CIT . D CIT 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc10 L ZN ZN . D ZN 35 1_555 O O7 CIT . D CIT 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc11 L ZN ZN . D ZN 35 1_555 O O3 CIT . D CIT 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc12 L ZN ZN . D ZN 35 1_555 X O HOH . G HOH 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 76 n n 
C1 O2 CIT sing 77 n n 
C1 C2 CIT sing 78 n n 
O2 HO2 CIT sing 79 n n 
C2 C3 CIT sing 80 n n 
C2 H21 CIT sing 81 n n 
C2 H22 CIT sing 82 n n 
C3 O7 CIT sing 83 n n 
C3 C4 CIT sing 84 n n 
C3 C6 CIT sing 85 n n 
O7 HO7 CIT sing 86 n n 
C4 C5 CIT sing 87 n n 
C4 H41 CIT sing 88 n n 
C4 H42 CIT sing 89 n n 
C5 O3 CIT doub 90 n n 
C5 O4 CIT sing 91 n n 
O4 HO4 CIT sing 92 n n 
C6 O5 CIT doub 93 n n 
C6 O6 CIT sing 94 n n 
O6 HO6 CIT sing 95 n n 
#
_atom_sites.entry_id                     2R2V 
_atom_sites.fract_transf_matrix[1][1]    0.019344 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019344 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010021 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 ZN C 1 35 1 ZN ZN . 
J 3 ACT C 1 36 2 ACT ACT . 
K 4 CIT C 1 37 1 CIT CIT . 
L 2 ZN D 1 35 2 ZN ZN . 
M 3 ACT D 1 36 1 ACT ACT . 
N 3 ACT D 1 37 3 ACT ACT . 
O 4 CIT D 1 38 2 CIT CIT . 
P 4 CIT G 1 35 3 CIT CIT . 
Q 4 CIT G 1 36 4 CIT CIT . 
R 5 HOH A 1 35 5 HOH WAT . 
R 5 HOH A 2 36 14 HOH WAT . 
R 5 HOH A 3 37 23 HOH WAT . 
R 5 HOH A 4 38 30 HOH WAT . 
R 5 HOH A 5 39 42 HOH WAT . 
R 5 HOH A 6 40 48 HOH WAT . 
R 5 HOH A 7 41 59 HOH WAT . 
R 5 HOH A 8 42 74 HOH WAT . 
R 5 HOH A 9 43 95 HOH WAT . 
R 5 HOH A 10 44 47 HOH WAT . 
S 5 HOH B 1 35 6 HOH WAT . 
S 5 HOH B 2 36 11 HOH WAT . 
S 5 HOH B 3 37 39 HOH WAT . 
S 5 HOH B 4 38 43 HOH WAT . 
S 5 HOH B 5 39 49 HOH WAT . 
S 5 HOH B 6 41 64 HOH WAT . 
S 5 HOH B 7 42 68 HOH WAT . 
S 5 HOH B 8 43 70 HOH WAT . 
S 5 HOH B 9 44 78 HOH WAT . 
S 5 HOH B 10 45 79 HOH WAT . 
S 5 HOH B 11 47 96 HOH WAT . 
S 5 HOH B 12 48 99 HOH WAT . 
T 5 HOH C 1 38 1 HOH WAT . 
T 5 HOH C 2 39 2 HOH WAT . 
T 5 HOH C 3 40 4 HOH WAT . 
T 5 HOH C 4 41 10 HOH WAT . 
T 5 HOH C 5 42 19 HOH WAT . 
T 5 HOH C 6 43 24 HOH WAT . 
T 5 HOH C 7 44 38 HOH WAT . 
T 5 HOH C 8 45 45 HOH WAT . 
T 5 HOH C 9 46 62 HOH WAT . 
T 5 HOH C 10 47 63 HOH WAT . 
T 5 HOH C 11 48 69 HOH WAT . 
T 5 HOH C 12 49 84 HOH WAT . 
T 5 HOH C 13 50 86 HOH WAT . 
T 5 HOH C 14 51 90 HOH WAT . 
T 5 HOH C 15 52 92 HOH WAT . 
T 5 HOH C 16 53 94 HOH WAT . 
U 5 HOH D 1 39 7 HOH WAT . 
U 5 HOH D 2 40 8 HOH WAT . 
U 5 HOH D 3 41 9 HOH WAT . 
U 5 HOH D 4 42 12 HOH WAT . 
U 5 HOH D 5 43 21 HOH WAT . 
U 5 HOH D 6 44 22 HOH WAT . 
U 5 HOH D 7 45 33 HOH WAT . 
U 5 HOH D 8 46 37 HOH WAT . 
U 5 HOH D 9 47 44 HOH WAT . 
U 5 HOH D 10 48 53 HOH WAT . 
U 5 HOH D 11 49 58 HOH WAT . 
U 5 HOH D 12 50 60 HOH WAT . 
U 5 HOH D 13 51 61 HOH WAT . 
U 5 HOH D 14 52 65 HOH WAT . 
U 5 HOH D 15 53 66 HOH WAT . 
U 5 HOH D 16 55 83 HOH WAT . 
U 5 HOH D 17 56 87 HOH WAT . 
U 5 HOH D 18 57 88 HOH WAT . 
U 5 HOH D 19 58 93 HOH WAT . 
V 5 HOH E 1 35 15 HOH WAT . 
V 5 HOH E 2 36 17 HOH WAT . 
V 5 HOH E 3 37 18 HOH WAT . 
V 5 HOH E 4 38 40 HOH WAT . 
V 5 HOH E 5 39 54 HOH WAT . 
V 5 HOH E 6 40 71 HOH WAT . 
V 5 HOH E 7 41 73 HOH WAT . 
V 5 HOH E 8 42 81 HOH WAT . 
V 5 HOH E 9 43 82 HOH WAT . 
V 5 HOH E 10 44 89 HOH WAT . 
V 5 HOH E 11 46 98 HOH WAT . 
V 5 HOH E 12 54 76 HOH WAT . 
W 5 HOH F 1 35 3 HOH WAT . 
W 5 HOH F 2 36 20 HOH WAT . 
W 5 HOH F 3 37 25 HOH WAT . 
W 5 HOH F 4 38 29 HOH WAT . 
W 5 HOH F 5 39 32 HOH WAT . 
W 5 HOH F 6 40 35 HOH WAT . 
W 5 HOH F 7 41 57 HOH WAT . 
W 5 HOH F 8 42 77 HOH WAT . 
W 5 HOH F 9 43 80 HOH WAT . 
X 5 HOH G 1 37 91 HOH WAT . 
X 5 HOH G 2 38 13 HOH WAT . 
X 5 HOH G 3 39 26 HOH WAT . 
X 5 HOH G 4 40 27 HOH WAT . 
X 5 HOH G 5 41 31 HOH WAT . 
X 5 HOH G 6 42 36 HOH WAT . 
X 5 HOH G 7 43 41 HOH WAT . 
X 5 HOH G 8 44 46 HOH WAT . 
X 5 HOH G 9 45 67 HOH WAT . 
X 5 HOH G 10 46 72 HOH WAT . 
X 5 HOH G 11 47 85 HOH WAT . 
Y 5 HOH H 1 35 50 HOH WAT . 
Y 5 HOH H 2 36 16 HOH WAT . 
Y 5 HOH H 3 37 28 HOH WAT . 
Y 5 HOH H 4 38 34 HOH WAT . 
Y 5 HOH H 5 39 51 HOH WAT . 
Y 5 HOH H 6 40 52 HOH WAT . 
Y 5 HOH H 7 41 55 HOH WAT . 
Y 5 HOH H 8 42 56 HOH WAT . 
Y 5 HOH H 9 43 75 HOH WAT . 
Y 5 HOH H 10 44 97 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . K 4 -18.436 9.584 -7.359 1 40 ? C1 CIT 37 C 1 
HETATM 2 O O1 CIT . . . K 4 -18.863 8.556 -6.787 1 40.9 ? O1 CIT 37 C 1 
HETATM 3 O O2 CIT . . . K 4 -18.44 10.649 -6.706 1 40.32 ? O2 CIT 37 C 1 
HETATM 4 C C2 CIT . . . K 4 -17.925 9.57 -8.788 1 37.96 ? C2 CIT 37 C 1 
HETATM 5 C C3 CIT . . . K 4 -17.245 8.25 -9.169 1 36.3 ? C3 CIT 37 C 1 
HETATM 6 O O7 CIT . . . K 4 -18.166 7.181 -8.851 1 33.57 ? O7 CIT 37 C 1 
HETATM 7 C C4 CIT . . . K 4 -16.958 8.25 -10.67 1 37.79 ? C4 CIT 37 C 1 
HETATM 8 C C5 CIT . . . K 4 -16.331 6.991 -11.239 1 38.29 ? C5 CIT 37 C 1 
HETATM 9 O O3 CIT . . . K 4 -16.335 5.891 -10.653 1 36.21 ? O3 CIT 37 C 1 
HETATM 10 O O4 CIT . . . K 4 -15.775 7.045 -12.36 1 40.46 ? O4 CIT 37 C 1 
HETATM 11 C C6 CIT . . . K 4 -15.944 8.039 -8.394 1 35.25 ? C6 CIT 37 C 1 
HETATM 12 O O5 CIT . . . K 4 -15.679 6.904 -7.951 1 30.26 ? O5 CIT 37 C 1 
HETATM 13 O O6 CIT . . . K 4 -15.122 8.967 -8.198 1 35.84 ? O6 CIT 37 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           13 
#