data_2R3K # _model_server_result.job_id 6WF6ywxpTQyCpVBwNdb45Q _model_server_result.datetime_utc '2024-11-30 06:03:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r3k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2R3K # _exptl.entry_id 2R3K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.241 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-bromo-5-phenyl-N-(pyrimidin-5-ylmethyl)pyrazolo[1,5-a]pyridin-7-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R3K _cell.length_a 53.45 _cell.length_b 71.7 _cell.length_c 72.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R3K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C GLY 177 A GLY 176 1_555 A N CSD 178 A CSD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C CSD 178 A CSD 177 1_555 A N LYS 179 A LYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C18 H14 Br N5' _chem_comp.formula_weight 380.241 _chem_comp.id SCQ _chem_comp.mon_nstd_flag . _chem_comp.name 3-bromo-5-phenyl-N-(pyrimidin-5-ylmethyl)pyrazolo[1,5-a]pyridin-7-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N15 C16 SCQ doub 298 n y N15 C14 SCQ sing 299 n y C16 N17 SCQ sing 300 n y C14 C13 SCQ doub 301 n y N17 C18 SCQ doub 302 n y C13 C18 SCQ sing 303 n y C13 C12 SCQ sing 304 n n N04 C05 SCQ doub 305 n y N04 N03 SCQ sing 306 n y N10 C12 SCQ sing 307 n n N10 C09 SCQ sing 308 n n C05 C01 SCQ sing 309 n y N03 C09 SCQ sing 310 n y N03 C02 SCQ sing 311 n y C09 C08 SCQ doub 312 n y C01 C02 SCQ doub 313 n y C01 BR24 SCQ sing 314 n n C02 C06 SCQ sing 315 n y C08 C07 SCQ sing 316 n y C06 C07 SCQ doub 317 n y C07 C11 SCQ sing 318 n y C23 C11 SCQ doub 319 n y C23 C22 SCQ sing 320 n y C11 C19 SCQ sing 321 n y C22 C21 SCQ doub 322 n y C19 C20 SCQ doub 323 n y C21 C20 SCQ sing 324 n y C05 H05 SCQ sing 325 n n C06 H06 SCQ sing 326 n n C08 H08 SCQ sing 327 n n N10 HN10 SCQ sing 328 n n C12 H121 SCQ sing 329 n n C12 H122 SCQ sing 330 n n C14 H14 SCQ sing 331 n n C16 H16 SCQ sing 332 n n C18 H18 SCQ sing 333 n n C19 H19 SCQ sing 334 n n C20 H20 SCQ sing 335 n n C21 H21 SCQ sing 336 n n C22 H22 SCQ sing 337 n n C23 H23 SCQ sing 338 n n # _atom_sites.entry_id 2R3K _atom_sites.fract_transf_matrix[1][1] 0.018709 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SCQ A 1 501 501 SCQ SCQ . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1005 1005 HOH HOH . C 3 HOH A 6 1006 1006 HOH HOH . C 3 HOH A 7 1007 1007 HOH HOH . C 3 HOH A 8 1008 1008 HOH HOH . C 3 HOH A 9 1009 1009 HOH HOH . C 3 HOH A 10 1010 1010 HOH HOH . C 3 HOH A 11 1011 1011 HOH HOH . C 3 HOH A 12 1012 1012 HOH HOH . C 3 HOH A 13 1013 1013 HOH HOH . C 3 HOH A 14 1014 1014 HOH HOH . C 3 HOH A 15 1015 1015 HOH HOH . C 3 HOH A 16 1016 1016 HOH HOH . C 3 HOH A 17 1017 1017 HOH HOH . C 3 HOH A 18 1018 1018 HOH HOH . C 3 HOH A 19 1019 1019 HOH HOH . C 3 HOH A 20 1020 1020 HOH HOH . C 3 HOH A 21 1021 1021 HOH HOH . C 3 HOH A 22 1022 1022 HOH HOH . C 3 HOH A 23 1023 1023 HOH HOH . C 3 HOH A 24 1024 1024 HOH HOH . C 3 HOH A 25 1025 1025 HOH HOH . C 3 HOH A 26 1026 1026 HOH HOH . C 3 HOH A 27 1027 1027 HOH HOH . C 3 HOH A 28 1028 1028 HOH HOH . C 3 HOH A 29 1029 1029 HOH HOH . C 3 HOH A 30 1030 1030 HOH HOH . C 3 HOH A 31 1031 1031 HOH HOH . C 3 HOH A 32 1032 1032 HOH HOH . C 3 HOH A 33 1033 1033 HOH HOH . C 3 HOH A 34 1034 1034 HOH HOH . C 3 HOH A 35 1035 1035 HOH HOH . C 3 HOH A 36 1036 1036 HOH HOH . C 3 HOH A 37 1037 1037 HOH HOH . C 3 HOH A 38 1038 1038 HOH HOH . C 3 HOH A 39 1039 1039 HOH HOH . C 3 HOH A 40 1040 1040 HOH HOH . C 3 HOH A 41 1041 1041 HOH HOH . C 3 HOH A 42 1042 1042 HOH HOH . C 3 HOH A 43 1043 1043 HOH HOH . C 3 HOH A 44 1044 1044 HOH HOH . C 3 HOH A 45 1045 1045 HOH HOH . C 3 HOH A 46 1046 1046 HOH HOH . C 3 HOH A 47 1047 1047 HOH HOH . C 3 HOH A 48 1048 1048 HOH HOH . C 3 HOH A 49 1049 1049 HOH HOH . C 3 HOH A 50 1050 1050 HOH HOH . C 3 HOH A 51 1051 1051 HOH HOH . C 3 HOH A 52 1052 1052 HOH HOH . C 3 HOH A 53 1053 1053 HOH HOH . C 3 HOH A 54 1054 1054 HOH HOH . C 3 HOH A 55 1055 1055 HOH HOH . C 3 HOH A 56 1056 1056 HOH HOH . C 3 HOH A 57 1057 1057 HOH HOH . C 3 HOH A 58 1058 1058 HOH HOH . C 3 HOH A 59 1059 1059 HOH HOH . C 3 HOH A 60 1060 1060 HOH HOH . C 3 HOH A 61 1061 1061 HOH HOH . C 3 HOH A 62 1062 1062 HOH HOH . C 3 HOH A 63 1063 1063 HOH HOH . C 3 HOH A 64 1064 1064 HOH HOH . C 3 HOH A 65 1065 1065 HOH HOH . C 3 HOH A 66 1066 1066 HOH HOH . C 3 HOH A 67 1067 1067 HOH HOH . C 3 HOH A 68 1068 1068 HOH HOH . C 3 HOH A 69 1069 1069 HOH HOH . C 3 HOH A 70 1070 1070 HOH HOH . C 3 HOH A 71 1071 1071 HOH HOH . C 3 HOH A 72 1072 1072 HOH HOH . C 3 HOH A 73 1073 1073 HOH HOH . C 3 HOH A 74 1074 1074 HOH HOH . C 3 HOH A 75 1075 1075 HOH HOH . C 3 HOH A 76 1076 1076 HOH HOH . C 3 HOH A 77 1077 1077 HOH HOH . C 3 HOH A 78 1078 1078 HOH HOH . C 3 HOH A 79 1079 1079 HOH HOH . C 3 HOH A 80 1080 1080 HOH HOH . C 3 HOH A 81 1081 1081 HOH HOH . C 3 HOH A 82 1082 1082 HOH HOH . C 3 HOH A 83 1083 1083 HOH HOH . C 3 HOH A 84 1084 1084 HOH HOH . C 3 HOH A 85 1085 1085 HOH HOH . C 3 HOH A 86 1086 1086 HOH HOH . C 3 HOH A 87 1087 1087 HOH HOH . C 3 HOH A 88 1088 1088 HOH HOH . C 3 HOH A 89 1089 1089 HOH HOH . C 3 HOH A 90 1090 1090 HOH HOH . C 3 HOH A 91 1091 1091 HOH HOH . C 3 HOH A 92 1092 1092 HOH HOH . C 3 HOH A 93 1093 1093 HOH HOH . C 3 HOH A 94 1094 1094 HOH HOH . C 3 HOH A 95 1095 1095 HOH HOH . C 3 HOH A 96 1096 1096 HOH HOH . C 3 HOH A 97 1097 1097 HOH HOH . C 3 HOH A 98 1098 1098 HOH HOH . C 3 HOH A 99 1099 1099 HOH HOH . C 3 HOH A 100 1100 1100 HOH HOH . C 3 HOH A 101 1101 1101 HOH HOH . C 3 HOH A 102 1102 1102 HOH HOH . C 3 HOH A 103 1103 1103 HOH HOH . C 3 HOH A 104 1104 1104 HOH HOH . C 3 HOH A 105 1105 1105 HOH HOH . C 3 HOH A 106 1106 1106 HOH HOH . C 3 HOH A 107 1107 1107 HOH HOH . C 3 HOH A 108 1108 1108 HOH HOH . C 3 HOH A 109 1109 1109 HOH HOH . C 3 HOH A 110 1110 1110 HOH HOH . C 3 HOH A 111 1111 1111 HOH HOH . C 3 HOH A 112 1112 1112 HOH HOH . C 3 HOH A 113 1113 1113 HOH HOH . C 3 HOH A 114 1114 1114 HOH HOH . C 3 HOH A 115 1115 1115 HOH HOH . C 3 HOH A 116 1116 1116 HOH HOH . C 3 HOH A 117 1117 1117 HOH HOH . C 3 HOH A 118 1118 1118 HOH HOH . C 3 HOH A 119 1119 1119 HOH HOH . C 3 HOH A 120 1120 1120 HOH HOH . C 3 HOH A 121 1121 1121 HOH HOH . C 3 HOH A 122 1122 1122 HOH HOH . C 3 HOH A 123 1123 1123 HOH HOH . C 3 HOH A 124 1124 1124 HOH HOH . C 3 HOH A 125 1125 1125 HOH HOH . C 3 HOH A 126 1126 1126 HOH HOH . C 3 HOH A 127 1127 1127 HOH HOH . C 3 HOH A 128 1128 1128 HOH HOH . C 3 HOH A 129 1129 1129 HOH HOH . C 3 HOH A 130 1130 1130 HOH HOH . C 3 HOH A 131 1131 1131 HOH HOH . C 3 HOH A 132 1132 1132 HOH HOH . C 3 HOH A 133 1133 1133 HOH HOH . C 3 HOH A 134 1134 1134 HOH HOH . C 3 HOH A 135 1135 1135 HOH HOH . C 3 HOH A 136 1136 1136 HOH HOH . C 3 HOH A 137 1137 1137 HOH HOH . C 3 HOH A 138 1138 1138 HOH HOH . C 3 HOH A 139 1139 1139 HOH HOH . C 3 HOH A 140 1140 1140 HOH HOH . C 3 HOH A 141 1141 1141 HOH HOH . C 3 HOH A 142 1142 1142 HOH HOH . C 3 HOH A 143 1143 1143 HOH HOH . C 3 HOH A 144 1144 1144 HOH HOH . C 3 HOH A 145 1145 1145 HOH HOH . C 3 HOH A 146 1146 1146 HOH HOH . C 3 HOH A 147 1147 1147 HOH HOH . C 3 HOH A 148 1148 1148 HOH HOH . C 3 HOH A 149 1149 1149 HOH HOH . C 3 HOH A 150 1150 1150 HOH HOH . C 3 HOH A 151 1151 1151 HOH HOH . C 3 HOH A 152 1152 1152 HOH HOH . C 3 HOH A 153 1153 1153 HOH HOH . C 3 HOH A 154 1154 1154 HOH HOH . C 3 HOH A 155 1155 1155 HOH HOH . C 3 HOH A 156 1156 1156 HOH HOH . C 3 HOH A 157 1157 1157 HOH HOH . C 3 HOH A 158 1158 1158 HOH HOH . C 3 HOH A 159 1159 1159 HOH HOH . C 3 HOH A 160 1160 1160 HOH HOH . C 3 HOH A 161 1161 1161 HOH HOH . C 3 HOH A 162 1162 1162 HOH HOH . C 3 HOH A 163 1163 1163 HOH HOH . C 3 HOH A 164 1164 1164 HOH HOH . C 3 HOH A 165 1165 1165 HOH HOH . C 3 HOH A 166 1166 1166 HOH HOH . C 3 HOH A 167 1167 1167 HOH HOH . C 3 HOH A 168 1168 1168 HOH HOH . C 3 HOH A 169 1169 1169 HOH HOH . C 3 HOH A 170 1170 1170 HOH HOH . C 3 HOH A 171 1171 1171 HOH HOH . C 3 HOH A 172 1172 1172 HOH HOH . C 3 HOH A 173 1173 1173 HOH HOH . C 3 HOH A 174 1174 1174 HOH HOH . C 3 HOH A 175 1175 1175 HOH HOH . C 3 HOH A 176 1176 1176 HOH HOH . C 3 HOH A 177 1177 1177 HOH HOH . C 3 HOH A 178 1178 1178 HOH HOH . C 3 HOH A 179 1179 1179 HOH HOH . C 3 HOH A 180 1180 1180 HOH HOH . C 3 HOH A 181 1181 1181 HOH HOH . C 3 HOH A 182 1182 1182 HOH HOH . C 3 HOH A 183 1183 1183 HOH HOH . C 3 HOH A 184 1184 1184 HOH HOH . C 3 HOH A 185 1185 1185 HOH HOH . C 3 HOH A 186 1186 1186 HOH HOH . C 3 HOH A 187 1187 1187 HOH HOH . C 3 HOH A 188 1188 1188 HOH HOH . C 3 HOH A 189 1189 1189 HOH HOH . C 3 HOH A 190 1190 1190 HOH HOH . C 3 HOH A 191 1191 1191 HOH HOH . C 3 HOH A 192 1192 1192 HOH HOH . C 3 HOH A 193 1193 1193 HOH HOH . C 3 HOH A 194 1194 1194 HOH HOH . C 3 HOH A 195 1195 1195 HOH HOH . C 3 HOH A 196 1196 1196 HOH HOH . C 3 HOH A 197 1197 1197 HOH HOH . C 3 HOH A 198 1198 1198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 SCQ . . . B 2 -0.382 31.78 8.664 0.7 44.82 ? C01 SCQ 501 A 1 HETATM 2 C C02 SCQ . . . B 2 0.167 30.559 8.971 0.7 45.87 ? C02 SCQ 501 A 1 HETATM 3 N N03 SCQ . . . B 2 1.38 30.511 8.351 0.7 45.77 ? N03 SCQ 501 A 1 HETATM 4 N N04 SCQ . . . B 2 1.612 31.687 7.648 0.7 45.11 ? N04 SCQ 501 A 1 HETATM 5 C C05 SCQ . . . B 2 0.538 32.447 7.847 0.7 44.56 ? C05 SCQ 501 A 1 HETATM 6 C C06 SCQ . . . B 2 -0.324 29.472 9.77 0.7 46.54 ? C06 SCQ 501 A 1 HETATM 7 C C07 SCQ . . . B 2 0.465 28.366 9.891 0.7 47.65 ? C07 SCQ 501 A 1 HETATM 8 C C08 SCQ . . . B 2 1.741 28.337 9.226 0.7 46.72 ? C08 SCQ 501 A 1 HETATM 9 C C09 SCQ . . . B 2 2.199 29.413 8.456 0.7 46.34 ? C09 SCQ 501 A 1 HETATM 10 N N10 SCQ . . . B 2 3.413 29.461 7.803 0.7 46.08 ? N10 SCQ 501 A 1 HETATM 11 C C11 SCQ . . . B 2 0.027 27.192 10.696 0.7 49.74 ? C11 SCQ 501 A 1 HETATM 12 C C12 SCQ . . . B 2 4.453 28.503 8.163 0.7 46.5 ? C12 SCQ 501 A 1 HETATM 13 C C13 SCQ . . . B 2 4.516 27.491 7.073 0.7 47.13 ? C13 SCQ 501 A 1 HETATM 14 C C14 SCQ . . . B 2 4.715 27.844 5.734 0.7 46.97 ? C14 SCQ 501 A 1 HETATM 15 N N15 SCQ . . . B 2 4.744 26.945 4.75 0.7 47.04 ? N15 SCQ 501 A 1 HETATM 16 C C16 SCQ . . . B 2 4.565 25.671 5.121 0.7 47.25 ? C16 SCQ 501 A 1 HETATM 17 N N17 SCQ . . . B 2 4.335 25.206 6.362 0.7 47.55 ? N17 SCQ 501 A 1 HETATM 18 C C18 SCQ . . . B 2 4.321 26.13 7.33 0.7 47.46 ? C18 SCQ 501 A 1 HETATM 19 C C19 SCQ . . . B 2 -0.102 27.275 12.094 0.7 50.65 ? C19 SCQ 501 A 1 HETATM 20 C C20 SCQ . . . B 2 -0.526 26.162 12.835 0.7 51.09 ? C20 SCQ 501 A 1 HETATM 21 C C21 SCQ . . . B 2 -0.822 24.962 12.187 0.7 51.23 ? C21 SCQ 501 A 1 HETATM 22 C C22 SCQ . . . B 2 -0.696 24.876 10.798 0.7 51.28 ? C22 SCQ 501 A 1 HETATM 23 C C23 SCQ . . . B 2 -0.278 25.988 10.061 0.7 50.65 ? C23 SCQ 501 A 1 HETATM 24 BR BR24 SCQ . . . B 2 -2.021 32.397 9.223 0.7 43.58 ? BR24 SCQ 501 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #