data_2R3W # _model_server_result.job_id gtnBTBIKiOZ51Q9GGFS54Q _model_server_result.datetime_utc '2025-07-20 16:35:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r3w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2501}' # _entry.id 2R3W # _exptl.entry_id 2R3W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 591.744 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R3W _cell.length_a 57.336 _cell.length_b 85.763 _cell.length_c 46.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R3W _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H33 N5 O4 S2' _chem_comp.formula_weight 591.744 _chem_comp.id G3G _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C6 G3G doub 83 n y C2 C18 G3G sing 84 n y C2 H2 G3G sing 85 n n C6 C5 G3G sing 86 n y C6 N43 G3G sing 87 n n C5 C20 G3G doub 88 n y C5 H5 G3G sing 89 n n C20 C27 G3G sing 90 n y C20 H20 G3G sing 91 n n C27 S9 G3G sing 92 n n C27 C18 G3G doub 93 n y C18 H18 G3G sing 94 n n S9 O11 G3G doub 95 n n S9 N32 G3G sing 96 n n S9 O40 G3G doub 97 n n N32 C24 G3G sing 98 n n N32 C33 G3G sing 99 n n C33 C34 G3G sing 100 n n C33 H331 G3G sing 101 n n C33 H332 G3G sing 102 n n C34 C35 G3G sing 103 n y C34 C38 G3G doub 104 n y C38 C39 G3G sing 105 n y C38 H38 G3G sing 106 n n C39 C37 G3G doub 107 n y C39 H39 G3G sing 108 n n C37 C36 G3G sing 109 n y C37 H37 G3G sing 110 n n C36 C35 G3G doub 111 n y C36 H36 G3G sing 112 n n C35 H35 G3G sing 113 n n C24 C23 G3G sing 114 n n C24 C25 G3G sing 115 n n C24 H24 G3G sing 116 n n C25 N22 G3G sing 117 n n C25 H251 G3G sing 118 n n C25 H252 G3G sing 119 n n N22 C21 G3G sing 120 n n N22 HN22 G3G sing 121 n n C21 C23 G3G sing 122 n n C21 H211 G3G sing 123 n n C21 H212 G3G sing 124 n n C23 N28 G3G sing 125 n n C23 H23 G3G sing 126 n n N28 S8 G3G sing 127 n n N28 C7 G3G sing 128 n n C7 C12 G3G sing 129 n n C7 H71 G3G sing 130 n n C7 H72 G3G sing 131 n n C12 C13 G3G sing 132 n y C12 C14 G3G doub 133 n y C14 C30 G3G sing 134 n y C14 H14 G3G sing 135 n n C30 C31 G3G doub 136 n y C30 H30 G3G sing 137 n n C31 C29 G3G sing 138 n y C31 H31 G3G sing 139 n n C29 C13 G3G doub 140 n y C29 H29 G3G sing 141 n n C13 H13 G3G sing 142 n n S8 O41 G3G doub 143 n n S8 C26 G3G sing 144 n n S8 O10 G3G doub 145 n n C26 C17 G3G sing 146 n y C26 C19 G3G doub 147 n y C17 C1 G3G doub 148 n y C17 H17 G3G sing 149 n n C1 C4 G3G sing 150 n y C1 H1 G3G sing 151 n n C4 N42 G3G sing 152 n n C4 C3 G3G doub 153 n y C3 C19 G3G sing 154 n y C3 H3 G3G sing 155 n n C19 H19 G3G sing 156 n n N42 H421 G3G sing 157 n n N42 H422 G3G sing 158 n n N43 H431 G3G sing 159 n n N43 H432 G3G sing 160 n n # _atom_sites.entry_id 2R3W _atom_sites.fract_transf_matrix[1][1] 0.017441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01166 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G3G A 1 2501 2501 G3G LIG . D 3 CL B 1 2601 2601 CL CL . E 4 HOH A 1 3003 3003 HOH HOH . E 4 HOH A 2 3004 3004 HOH HOH . E 4 HOH A 3 3006 3006 HOH HOH . E 4 HOH A 4 3007 3007 HOH HOH . E 4 HOH A 5 3009 3009 HOH HOH . E 4 HOH A 6 3010 3010 HOH HOH . E 4 HOH A 7 3011 3011 HOH HOH . E 4 HOH A 8 3012 3012 HOH HOH . E 4 HOH A 9 3019 3019 HOH HOH . E 4 HOH A 10 3022 3022 HOH HOH . E 4 HOH A 11 3023 3023 HOH HOH . E 4 HOH A 12 3027 3027 HOH HOH . E 4 HOH A 13 3033 3033 HOH HOH . E 4 HOH A 14 3037 3037 HOH HOH . E 4 HOH A 15 3038 3038 HOH HOH . E 4 HOH A 16 3040 3040 HOH HOH . E 4 HOH A 17 3041 3041 HOH HOH . E 4 HOH A 18 3046 3046 HOH HOH . E 4 HOH A 19 3049 3049 HOH HOH . E 4 HOH A 20 3050 3050 HOH HOH . E 4 HOH A 21 3055 3055 HOH HOH . E 4 HOH A 22 3057 3057 HOH HOH . E 4 HOH A 23 3062 3062 HOH HOH . E 4 HOH A 24 3063 3063 HOH HOH . E 4 HOH A 25 3064 3064 HOH HOH . E 4 HOH A 26 3065 3065 HOH HOH . E 4 HOH A 27 3066 3066 HOH HOH . E 4 HOH A 28 3067 3067 HOH HOH . E 4 HOH A 29 3068 3068 HOH HOH . E 4 HOH A 30 3076 3076 HOH HOH . E 4 HOH A 31 3077 3077 HOH HOH . E 4 HOH A 32 3078 3078 HOH HOH . E 4 HOH A 33 3079 3079 HOH HOH . E 4 HOH A 34 3080 3080 HOH HOH . E 4 HOH A 35 3083 3083 HOH HOH . E 4 HOH A 36 3085 3085 HOH HOH . E 4 HOH A 37 3088 3088 HOH HOH . E 4 HOH A 38 3089 3089 HOH HOH . E 4 HOH A 39 3093 3093 HOH HOH . E 4 HOH A 40 3094 3094 HOH HOH . E 4 HOH A 41 3098 3098 HOH HOH . E 4 HOH A 42 3099 3099 HOH HOH . E 4 HOH A 43 3100 3100 HOH HOH . E 4 HOH A 44 3101 3101 HOH HOH . E 4 HOH A 45 3106 3106 HOH HOH . E 4 HOH A 46 3108 3108 HOH HOH . F 4 HOH B 1 3001 3001 HOH HOH . F 4 HOH B 2 3002 3002 HOH HOH . F 4 HOH B 3 3005 3005 HOH HOH . F 4 HOH B 4 3008 3008 HOH HOH . F 4 HOH B 5 3013 3013 HOH HOH . F 4 HOH B 6 3014 3014 HOH HOH . F 4 HOH B 7 3015 3015 HOH HOH . F 4 HOH B 8 3016 3016 HOH HOH . F 4 HOH B 9 3017 3017 HOH HOH . F 4 HOH B 10 3018 3018 HOH HOH . F 4 HOH B 11 3020 3020 HOH HOH . F 4 HOH B 12 3021 3021 HOH HOH . F 4 HOH B 13 3024 3024 HOH HOH . F 4 HOH B 14 3025 3025 HOH HOH . F 4 HOH B 15 3026 3026 HOH HOH . F 4 HOH B 16 3028 3028 HOH HOH . F 4 HOH B 17 3029 3029 HOH HOH . F 4 HOH B 18 3030 3030 HOH HOH . F 4 HOH B 19 3031 3031 HOH HOH . F 4 HOH B 20 3032 3032 HOH HOH . F 4 HOH B 21 3034 3034 HOH HOH . F 4 HOH B 22 3035 3035 HOH HOH . F 4 HOH B 23 3036 3036 HOH HOH . F 4 HOH B 24 3039 3039 HOH HOH . F 4 HOH B 25 3042 3042 HOH HOH . F 4 HOH B 26 3043 3043 HOH HOH . F 4 HOH B 27 3044 3044 HOH HOH . F 4 HOH B 28 3045 3045 HOH HOH . F 4 HOH B 29 3047 3047 HOH HOH . F 4 HOH B 30 3048 3048 HOH HOH . F 4 HOH B 31 3051 3051 HOH HOH . F 4 HOH B 32 3052 3052 HOH HOH . F 4 HOH B 33 3053 3053 HOH HOH . F 4 HOH B 34 3054 3054 HOH HOH . F 4 HOH B 35 3056 3056 HOH HOH . F 4 HOH B 36 3058 3058 HOH HOH . F 4 HOH B 37 3059 3059 HOH HOH . F 4 HOH B 38 3060 3060 HOH HOH . F 4 HOH B 39 3061 3061 HOH HOH . F 4 HOH B 40 3069 3069 HOH HOH . F 4 HOH B 41 3070 3070 HOH HOH . F 4 HOH B 42 3071 3071 HOH HOH . F 4 HOH B 43 3072 3072 HOH HOH . F 4 HOH B 44 3073 3073 HOH HOH . F 4 HOH B 45 3074 3074 HOH HOH . F 4 HOH B 46 3075 3075 HOH HOH . F 4 HOH B 47 3081 3081 HOH HOH . F 4 HOH B 48 3082 3082 HOH HOH . F 4 HOH B 49 3084 3084 HOH HOH . F 4 HOH B 50 3086 3086 HOH HOH . F 4 HOH B 51 3087 3087 HOH HOH . F 4 HOH B 52 3090 3090 HOH HOH . F 4 HOH B 53 3091 3091 HOH HOH . F 4 HOH B 54 3092 3092 HOH HOH . F 4 HOH B 55 3095 3095 HOH HOH . F 4 HOH B 56 3096 3096 HOH HOH . F 4 HOH B 57 3097 3097 HOH HOH . F 4 HOH B 58 3102 3102 HOH HOH . F 4 HOH B 59 3103 3103 HOH HOH . F 4 HOH B 60 3104 3104 HOH HOH . F 4 HOH B 61 3105 3105 HOH HOH . F 4 HOH B 62 3107 3107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 G3G . . . C 2 -14.331 -23.739 21.595 1 21.28 ? C2 G3G 2501 A 1 HETATM 2 C C6 G3G . . . C 2 -15.353 -24.198 20.742 1 19.36 ? C6 G3G 2501 A 1 HETATM 3 C C5 G3G . . . C 2 -15.189 -24.164 19.337 1 29.79 ? C5 G3G 2501 A 1 HETATM 4 C C20 G3G . . . C 2 -13.989 -23.639 18.789 1 27.35 ? C20 G3G 2501 A 1 HETATM 5 C C27 G3G . . . C 2 -12.954 -23.173 19.637 1 22.12 ? C27 G3G 2501 A 1 HETATM 6 C C18 G3G . . . C 2 -13.122 -23.236 21.045 1 21.31 ? C18 G3G 2501 A 1 HETATM 7 S S9 G3G . . . C 2 -11.453 -22.526 18.919 1 29.81 ? S9 G3G 2501 A 1 HETATM 8 O O40 G3G . . . C 2 -10.441 -22.958 19.864 1 33.9 ? O40 G3G 2501 A 1 HETATM 9 O O11 G3G . . . C 2 -11.462 -22.828 17.498 1 25.49 ? O11 G3G 2501 A 1 HETATM 10 N N32 G3G . . . C 2 -11.785 -20.849 19.169 1 29.67 ? N32 G3G 2501 A 1 HETATM 11 C C33 G3G . . . C 2 -11.314 -20.239 20.448 1 22.42 ? C33 G3G 2501 A 1 HETATM 12 C C34 G3G . . . C 2 -10.019 -19.437 20.332 1 20.88 ? C34 G3G 2501 A 1 HETATM 13 C C38 G3G . . . C 2 -9.761 -18.388 21.257 1 27.65 ? C38 G3G 2501 A 1 HETATM 14 C C39 G3G . . . C 2 -8.575 -17.619 21.18 1 32.37 ? C39 G3G 2501 A 1 HETATM 15 C C37 G3G . . . C 2 -7.636 -17.921 20.158 1 31.93 ? C37 G3G 2501 A 1 HETATM 16 C C36 G3G . . . C 2 -7.886 -18.984 19.24 1 25.5 ? C36 G3G 2501 A 1 HETATM 17 C C35 G3G . . . C 2 -9.085 -19.741 19.313 1 18.82 ? C35 G3G 2501 A 1 HETATM 18 C C24 G3G . . . C 2 -12.723 -20.193 18.179 1 29.4 ? C24 G3G 2501 A 1 HETATM 19 C C25 G3G . . . C 2 -13.996 -19.563 18.79 1 23.92 ? C25 G3G 2501 A 1 HETATM 20 N N22 G3G . . . C 2 -13.939 -18.096 18.546 1 24.13 ? N22 G3G 2501 A 1 HETATM 21 C C21 G3G . . . C 2 -12.524 -17.728 18.239 1 19.22 ? C21 G3G 2501 A 1 HETATM 22 C C23 G3G . . . C 2 -11.975 -18.973 17.493 1 26.96 ? C23 G3G 2501 A 1 HETATM 23 N N28 G3G . . . C 2 -12.267 -18.891 16.022 1 31.16 ? N28 G3G 2501 A 1 HETATM 24 C C7 G3G . . . C 2 -13.582 -18.751 15.371 1 26.94 ? C7 G3G 2501 A 1 HETATM 25 C C12 G3G . . . C 2 -14.451 -20.007 15.345 1 25.03 ? C12 G3G 2501 A 1 HETATM 26 C C14 G3G . . . C 2 -15.872 -19.87 15.454 1 25.65 ? C14 G3G 2501 A 1 HETATM 27 C C30 G3G . . . C 2 -16.736 -21.002 15.418 1 27.8 ? C30 G3G 2501 A 1 HETATM 28 C C31 G3G . . . C 2 -16.164 -22.305 15.297 1 33.18 ? C31 G3G 2501 A 1 HETATM 29 C C29 G3G . . . C 2 -14.749 -22.452 15.21 1 26.83 ? C29 G3G 2501 A 1 HETATM 30 C C13 G3G . . . C 2 -13.886 -21.313 15.225 1 29.43 ? C13 G3G 2501 A 1 HETATM 31 S S8 G3G . . . C 2 -10.952 -19.258 15.026 1 29.99 ? S8 G3G 2501 A 1 HETATM 32 C C26 G3G . . . C 2 -9.845 -17.889 15.05 1 23.3 ? C26 G3G 2501 A 1 HETATM 33 C C17 G3G . . . C 2 -10.074 -16.615 14.464 1 28.82 ? C17 G3G 2501 A 1 HETATM 34 C C1 G3G . . . C 2 -9.104 -15.565 14.565 1 28.96 ? C1 G3G 2501 A 1 HETATM 35 C C4 G3G . . . C 2 -7.848 -15.8 15.233 1 35.04 ? C4 G3G 2501 A 1 HETATM 36 C C3 G3G . . . C 2 -7.607 -17.079 15.822 1 27.09 ? C3 G3G 2501 A 1 HETATM 37 C C19 G3G . . . C 2 -8.614 -18.085 15.768 1 23.31 ? C19 G3G 2501 A 1 HETATM 38 O O41 G3G . . . C 2 -11.441 -19.45 13.647 1 35.53 ? O41 G3G 2501 A 1 HETATM 39 O O10 G3G . . . C 2 -10.25 -20.41 15.616 1 32.89 ? O10 G3G 2501 A 1 HETATM 40 N N42 G3G . . . C 2 -6.885 -14.854 15.316 1 30.88 ? N42 G3G 2501 A 1 HETATM 41 N N43 G3G . . . C 2 -16.495 -24.681 21.264 1 25.33 ? N43 G3G 2501 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 503 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #