data_2R40 # _model_server_result.job_id pLdVezKU7uN9bXes4Axp7Q _model_server_result.datetime_utc '2024-10-19 12:29:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r40 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":9001}' # _entry.id 2R40 # _exptl.entry_id 2R40 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 480.634 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2beta,3beta,5beta,22R)-2,3,14,20,22,25-hexahydroxycholest-7-en-6-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2R40 _cell.length_a 58.001 _cell.length_b 58.001 _cell.length_c 303.592 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R40 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -101.197333 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H44 O7' _chem_comp.formula_weight 480.634 _chem_comp.id 20E _chem_comp.mon_nstd_flag . _chem_comp.name (2beta,3beta,5beta,22R)-2,3,14,20,22,25-hexahydroxycholest-7-en-6-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-beta,3-beta,14,20,22,25-Hexahydroxy-5-beta-cholet-7-en-6- one' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C25 20E sing 1 n n O25 C25 20E sing 2 n n C25 C24 20E sing 3 n n C25 C26 20E sing 4 n n O22 C22 20E sing 5 n n C24 C23 20E sing 6 n n C21 C20 20E sing 7 n n C23 C22 20E sing 8 n n C22 C20 20E sing 9 n n C20 O20 20E sing 10 n n C20 C17 20E sing 11 n n C17 C13 20E sing 12 n n C17 C16 20E sing 13 n n C12 C13 20E sing 14 n n C12 C11 20E sing 15 n n C13 C18 20E sing 16 n n C13 C14 20E sing 17 n n C11 C9 20E sing 18 n n C16 C15 20E sing 19 n n O14 C14 20E sing 20 n n C14 C15 20E sing 21 n n C14 C8 20E sing 22 n n C9 C8 20E sing 23 n n C9 C10 20E sing 24 n n O2 C2 20E sing 25 n n C1 C2 20E sing 26 n n C1 C10 20E sing 27 n n C8 C7 20E doub 28 n n C2 C3 20E sing 29 n n C19 C10 20E sing 30 n n C10 C5 20E sing 31 n n C7 C6 20E sing 32 n n C3 C4 20E sing 33 n n C3 O3 20E sing 34 n n C5 C4 20E sing 35 n n C5 C6 20E sing 36 n n C6 O6 20E doub 37 n n C19 H191 20E sing 38 n n C19 H192 20E sing 39 n n C19 H193 20E sing 40 n n C1 H11 20E sing 41 n n C1 H12 20E sing 42 n n C2 H2 20E sing 43 n n O2 HO2 20E sing 44 n n C3 H3 20E sing 45 n n O3 HO3 20E sing 46 n n C4 H41 20E sing 47 n n C4 H42 20E sing 48 n n C5 H5 20E sing 49 n n C7 H7 20E sing 50 n n C9 H9 20E sing 51 n n C11 H111 20E sing 52 n n C11 H112 20E sing 53 n n C12 H121 20E sing 54 n n C12 H122 20E sing 55 n n C18 H181 20E sing 56 n n C18 H182 20E sing 57 n n C18 H183 20E sing 58 n n O14 HO14 20E sing 59 n n C15 H151 20E sing 60 n n C15 H152 20E sing 61 n n C16 H161 20E sing 62 n n C16 H162 20E sing 63 n n C17 H17 20E sing 64 n n O20 HO20 20E sing 65 n n C21 H211 20E sing 66 n n C21 H212 20E sing 67 n n C21 H213 20E sing 68 n n C22 H22 20E sing 69 n n O22 HO22 20E sing 70 n n C23 H231 20E sing 71 n n C23 H232 20E sing 72 n n C24 H241 20E sing 73 n n C24 H242 20E sing 74 n n C26 H261 20E sing 75 n n C26 H262 20E sing 76 n n C26 H263 20E sing 77 n n C27 H271 20E sing 78 n n C27 H272 20E sing 79 n n C27 H273 20E sing 80 n n O25 HO25 20E sing 81 n n # _atom_sites.entry_id 2R40 _atom_sites.fract_transf_matrix[1][1] 0.017241 _atom_sites.fract_transf_matrix[1][2] 0.009954 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003294 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FLC D 1 9400 9400 FLC FLC . D 4 SO4 D 1 1327 1327 SO4 SO4 . E 5 20E D 1 9001 9001 20E 20E . F 6 GOL D 1 9500 9500 GOL GOL . G 7 EPH A 1 600 600 EPH EPH . H 8 HOH D 1 9501 3 HOH HOH . H 8 HOH D 2 9502 6 HOH HOH . H 8 HOH D 3 9503 8 HOH HOH . H 8 HOH D 4 9504 9 HOH HOH . H 8 HOH D 5 9505 10 HOH HOH . H 8 HOH D 6 9506 11 HOH HOH . H 8 HOH D 7 9507 12 HOH HOH . H 8 HOH D 8 9508 14 HOH HOH . H 8 HOH D 9 9509 15 HOH HOH . H 8 HOH D 10 9510 16 HOH HOH . H 8 HOH D 11 9511 17 HOH HOH . H 8 HOH D 12 9512 18 HOH HOH . H 8 HOH D 13 9513 19 HOH HOH . H 8 HOH D 14 9514 20 HOH HOH . H 8 HOH D 15 9515 22 HOH HOH . H 8 HOH D 16 9516 23 HOH HOH . H 8 HOH D 17 9517 24 HOH HOH . H 8 HOH D 18 9518 25 HOH HOH . H 8 HOH D 19 9519 26 HOH HOH . H 8 HOH D 20 9520 27 HOH HOH . H 8 HOH D 21 9521 28 HOH HOH . H 8 HOH D 22 9522 29 HOH HOH . H 8 HOH D 23 9523 30 HOH HOH . H 8 HOH D 24 9524 31 HOH HOH . H 8 HOH D 25 9525 33 HOH HOH . H 8 HOH D 26 9526 38 HOH HOH . H 8 HOH D 27 9527 39 HOH HOH . H 8 HOH D 28 9528 40 HOH HOH . H 8 HOH D 29 9529 41 HOH HOH . H 8 HOH D 30 9530 42 HOH HOH . H 8 HOH D 31 9531 43 HOH HOH . H 8 HOH D 32 9532 45 HOH HOH . H 8 HOH D 33 9533 46 HOH HOH . H 8 HOH D 34 9534 62 HOH HOH . H 8 HOH D 35 9535 63 HOH HOH . H 8 HOH D 36 9536 65 HOH HOH . H 8 HOH D 37 9537 66 HOH HOH . H 8 HOH D 38 9538 78 HOH HOH . H 8 HOH D 39 9539 79 HOH HOH . H 8 HOH D 40 9540 80 HOH HOH . H 8 HOH D 41 9541 81 HOH HOH . H 8 HOH D 42 9542 83 HOH HOH . H 8 HOH D 43 9543 84 HOH HOH . H 8 HOH D 44 9544 85 HOH HOH . H 8 HOH D 45 9545 86 HOH HOH . H 8 HOH D 46 9546 87 HOH HOH . I 8 HOH A 1 601 1 HOH HOH . I 8 HOH A 2 602 2 HOH HOH . I 8 HOH A 3 603 4 HOH HOH . I 8 HOH A 4 604 5 HOH HOH . I 8 HOH A 5 605 7 HOH HOH . I 8 HOH A 6 606 13 HOH HOH . I 8 HOH A 7 607 21 HOH HOH . I 8 HOH A 8 608 32 HOH HOH . I 8 HOH A 9 609 36 HOH HOH . I 8 HOH A 10 610 37 HOH HOH . I 8 HOH A 11 611 44 HOH HOH . I 8 HOH A 12 612 47 HOH HOH . I 8 HOH A 13 613 48 HOH HOH . I 8 HOH A 14 614 49 HOH HOH . I 8 HOH A 15 615 50 HOH HOH . I 8 HOH A 16 616 51 HOH HOH . I 8 HOH A 17 617 52 HOH HOH . I 8 HOH A 18 618 53 HOH HOH . I 8 HOH A 19 619 54 HOH HOH . I 8 HOH A 20 620 55 HOH HOH . I 8 HOH A 21 621 56 HOH HOH . I 8 HOH A 22 622 57 HOH HOH . I 8 HOH A 23 623 58 HOH HOH . I 8 HOH A 24 624 59 HOH HOH . I 8 HOH A 25 625 60 HOH HOH . I 8 HOH A 26 626 61 HOH HOH . I 8 HOH A 27 627 64 HOH HOH . I 8 HOH A 28 628 67 HOH HOH . I 8 HOH A 29 629 68 HOH HOH . I 8 HOH A 30 630 69 HOH HOH . I 8 HOH A 31 631 70 HOH HOH . I 8 HOH A 32 632 71 HOH HOH . I 8 HOH A 33 633 72 HOH HOH . I 8 HOH A 34 634 73 HOH HOH . I 8 HOH A 35 635 74 HOH HOH . I 8 HOH A 36 636 75 HOH HOH . I 8 HOH A 37 637 76 HOH HOH . I 8 HOH A 38 638 77 HOH HOH . I 8 HOH A 39 639 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 20E . . . E 5 26.006 -10.94 -2.709 1 33.23 ? C19 20E 9001 D 1 HETATM 2 C C10 20E . . . E 5 27.359 -10.228 -2.685 1 35.28 ? C10 20E 9001 D 1 HETATM 3 C C1 20E . . . E 5 28.42 -11.251 -3.163 1 33.13 ? C1 20E 9001 D 1 HETATM 4 C C2 20E . . . E 5 29.835 -10.671 -3.059 1 34.28 ? C2 20E 9001 D 1 HETATM 5 O O2 20E . . . E 5 30.795 -11.656 -3.476 1 36.75 ? O2 20E 9001 D 1 HETATM 6 C C3 20E . . . E 5 30.165 -10.184 -1.637 1 34.52 ? C3 20E 9001 D 1 HETATM 7 O O3 20E . . . E 5 30.294 -11.293 -0.773 1 34.14 ? O3 20E 9001 D 1 HETATM 8 C C4 20E . . . E 5 29.094 -9.227 -1.066 1 35.35 ? C4 20E 9001 D 1 HETATM 9 C C5 20E . . . E 5 27.647 -9.75 -1.237 1 34.54 ? C5 20E 9001 D 1 HETATM 10 C C6 20E . . . E 5 26.774 -8.563 -0.808 1 35.82 ? C6 20E 9001 D 1 HETATM 11 O O6 20E . . . E 5 26.557 -8.393 0.397 1 34.03 ? O6 20E 9001 D 1 HETATM 12 C C7 20E . . . E 5 26.297 -7.638 -1.754 1 34.72 ? C7 20E 9001 D 1 HETATM 13 C C8 20E . . . E 5 26.531 -7.788 -3.126 1 33.21 ? C8 20E 9001 D 1 HETATM 14 C C9 20E . . . E 5 27.386 -8.975 -3.658 1 34.19 ? C9 20E 9001 D 1 HETATM 15 C C11 20E . . . E 5 27.073 -9.335 -5.163 1 33.34 ? C11 20E 9001 D 1 HETATM 16 C C12 20E . . . E 5 26.611 -8.155 -6.071 1 32.63 ? C12 20E 9001 D 1 HETATM 17 C C13 20E . . . E 5 25.455 -7.354 -5.447 1 32.15 ? C13 20E 9001 D 1 HETATM 18 C C18 20E . . . E 5 24.222 -8.266 -5.207 1 31.3 ? C18 20E 9001 D 1 HETATM 19 C C14 20E . . . E 5 26.016 -6.739 -4.154 1 33.15 ? C14 20E 9001 D 1 HETATM 20 O O14 20E . . . E 5 27.179 -5.951 -4.452 1 32.47 ? O14 20E 9001 D 1 HETATM 21 C C15 20E . . . E 5 24.93 -5.774 -3.727 1 31.55 ? C15 20E 9001 D 1 HETATM 22 C C16 20E . . . E 5 24.483 -5.146 -5.073 1 31.68 ? C16 20E 9001 D 1 HETATM 23 C C17 20E . . . E 5 25.08 -6.019 -6.208 1 30.51 ? C17 20E 9001 D 1 HETATM 24 C C20 20E . . . E 5 24.164 -6.052 -7.518 1 29.97 ? C20 20E 9001 D 1 HETATM 25 O O20 20E . . . E 5 23.005 -6.838 -7.329 1 28.64 ? O20 20E 9001 D 1 HETATM 26 C C21 20E . . . E 5 24.867 -6.682 -8.72 1 24.23 ? C21 20E 9001 D 1 HETATM 27 C C22 20E . . . E 5 23.655 -4.592 -7.886 1 33.93 ? C22 20E 9001 D 1 HETATM 28 O O22 20E . . . E 5 22.633 -4.615 -8.943 1 35.63 ? O22 20E 9001 D 1 HETATM 29 C C23 20E . . . E 5 24.772 -3.569 -8.268 1 34.48 ? C23 20E 9001 D 1 HETATM 30 C C24 20E . . . E 5 24.123 -2.273 -8.835 1 36.18 ? C24 20E 9001 D 1 HETATM 31 C C25 20E . . . E 5 25.087 -1.074 -8.957 1 36.9 ? C25 20E 9001 D 1 HETATM 32 C C26 20E . . . E 5 25.374 -0.448 -7.578 1 36.16 ? C26 20E 9001 D 1 HETATM 33 C C27 20E . . . E 5 24.465 -0.036 -9.897 1 37.83 ? C27 20E 9001 D 1 HETATM 34 O O25 20E . . . E 5 26.329 -1.526 -9.521 1 35.15 ? O25 20E 9001 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #