data_2R42
#
_model_server_result.job_id            SYOo8kIpSbKmflbZeQJB1w 
_model_server_result.datetime_utc      '2024-12-02 17:53:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2r42 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":400}' 
#
_entry.id    2R42 
#
_exptl.entry_id    2R42 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.392 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2R42 
_cell.length_a            77.99 
_cell.length_b            118.43 
_cell.length_c            42.86 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2R42 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 77.99 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H28 O6 P2 S' 
_chem_comp.formula_weight    398.392 
_chem_comp.id                FPS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'FARNESYL THIOPYROPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 S1 FPS sing 83 n n 
C1 C2 FPS sing 84 n n 
C1 H11 FPS sing 85 n n 
C1 H12A FPS sing 86 n n 
S1 PA FPS sing 87 n n 
C2 C3 FPS doub 88 e n 
C2 H2 FPS sing 89 n n 
C3 C4 FPS sing 90 n n 
C3 C5 FPS sing 91 n n 
C4 H41 FPS sing 92 n n 
C4 H42 FPS sing 93 n n 
C4 H43 FPS sing 94 n n 
C5 C6 FPS sing 95 n n 
C5 H51 FPS sing 96 n n 
C5 H52 FPS sing 97 n n 
C6 C7 FPS sing 98 n n 
C6 H61 FPS sing 99 n n 
C6 H62 FPS sing 100 n n 
C7 C8 FPS doub 101 e n 
C7 H7 FPS sing 102 n n 
C8 C10 FPS sing 103 n n 
C8 C9 FPS sing 104 n n 
C10 C11 FPS sing 105 n n 
C10 H101 FPS sing 106 n n 
C10 H102 FPS sing 107 n n 
C9 H91 FPS sing 108 n n 
C9 H92 FPS sing 109 n n 
C9 H93 FPS sing 110 n n 
C11 C12 FPS sing 111 n n 
C11 H111 FPS sing 112 n n 
C11 H112 FPS sing 113 n n 
C12 C13 FPS doub 114 n n 
C12 H12 FPS sing 115 n n 
C13 C14 FPS sing 116 n n 
C13 C15 FPS sing 117 n n 
C14 H141 FPS sing 118 n n 
C14 H142 FPS sing 119 n n 
C14 H143 FPS sing 120 n n 
C15 H151 FPS sing 121 n n 
C15 H152 FPS sing 122 n n 
C15 H153 FPS sing 123 n n 
PA O1A FPS doub 124 n n 
PA O2A FPS sing 125 n n 
PA O3A FPS sing 126 n n 
O2A H2A FPS sing 127 n n 
O3A PB FPS sing 128 n n 
PB O1B FPS sing 129 n n 
PB O2B FPS doub 130 n n 
PB O3B FPS sing 131 n n 
O1B H1B FPS sing 132 n n 
O3B H3B FPS sing 133 n n 
#
_atom_sites.entry_id                     2R42 
_atom_sites.fract_transf_matrix[1][1]    0.012822 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008444 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023332 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 500 500 MG MG . 
C 3 FPS A 1 400 400 FPS FPS . 
D 4 HOH A 1 501 501 HOH HOH . 
D 4 HOH A 2 502 502 HOH HOH . 
D 4 HOH A 3 503 503 HOH HOH . 
D 4 HOH A 4 504 504 HOH HOH . 
D 4 HOH A 5 505 505 HOH HOH . 
D 4 HOH A 6 506 506 HOH HOH . 
D 4 HOH A 7 507 507 HOH HOH . 
D 4 HOH A 8 508 508 HOH HOH . 
D 4 HOH A 9 509 509 HOH HOH . 
D 4 HOH A 10 510 510 HOH HOH . 
D 4 HOH A 11 511 511 HOH HOH . 
D 4 HOH A 12 512 512 HOH HOH . 
D 4 HOH A 13 513 513 HOH HOH . 
D 4 HOH A 14 514 514 HOH HOH . 
D 4 HOH A 15 515 515 HOH HOH . 
D 4 HOH A 16 516 516 HOH HOH . 
D 4 HOH A 17 517 517 HOH HOH . 
D 4 HOH A 18 518 518 HOH HOH . 
D 4 HOH A 19 519 519 HOH HOH . 
D 4 HOH A 20 520 520 HOH HOH . 
D 4 HOH A 21 521 521 HOH HOH . 
D 4 HOH A 22 522 522 HOH HOH . 
D 4 HOH A 23 523 523 HOH HOH . 
D 4 HOH A 24 524 524 HOH HOH . 
D 4 HOH A 25 525 525 HOH HOH . 
D 4 HOH A 26 526 526 HOH HOH . 
D 4 HOH A 27 527 527 HOH HOH . 
D 4 HOH A 28 528 528 HOH HOH . 
D 4 HOH A 29 529 529 HOH HOH . 
D 4 HOH A 30 530 530 HOH HOH . 
D 4 HOH A 31 531 531 HOH HOH . 
D 4 HOH A 32 532 532 HOH HOH . 
D 4 HOH A 33 533 533 HOH HOH . 
D 4 HOH A 34 534 534 HOH HOH . 
D 4 HOH A 35 535 535 HOH HOH . 
D 4 HOH A 36 536 536 HOH HOH . 
D 4 HOH A 37 537 537 HOH HOH . 
D 4 HOH A 38 538 538 HOH HOH . 
D 4 HOH A 39 539 539 HOH HOH . 
D 4 HOH A 40 540 540 HOH HOH . 
D 4 HOH A 41 541 541 HOH HOH . 
D 4 HOH A 42 542 542 HOH HOH . 
D 4 HOH A 43 543 543 HOH HOH . 
D 4 HOH A 44 544 544 HOH HOH . 
D 4 HOH A 45 545 545 HOH HOH . 
D 4 HOH A 46 546 546 HOH HOH . 
D 4 HOH A 47 547 547 HOH HOH . 
D 4 HOH A 48 548 548 HOH HOH . 
D 4 HOH A 49 549 549 HOH HOH . 
D 4 HOH A 50 550 550 HOH HOH . 
D 4 HOH A 51 551 551 HOH HOH . 
D 4 HOH A 52 552 552 HOH HOH . 
D 4 HOH A 53 553 553 HOH HOH . 
D 4 HOH A 54 554 554 HOH HOH . 
D 4 HOH A 55 555 555 HOH HOH . 
D 4 HOH A 56 556 556 HOH HOH . 
D 4 HOH A 57 557 557 HOH HOH . 
D 4 HOH A 58 558 558 HOH HOH . 
D 4 HOH A 59 559 559 HOH HOH . 
D 4 HOH A 60 560 560 HOH HOH . 
D 4 HOH A 61 561 561 HOH HOH . 
D 4 HOH A 62 562 562 HOH HOH . 
D 4 HOH A 63 563 563 HOH HOH . 
D 4 HOH A 64 564 564 HOH HOH . 
D 4 HOH A 65 565 565 HOH HOH . 
D 4 HOH A 66 566 566 HOH HOH . 
D 4 HOH A 67 567 567 HOH HOH . 
D 4 HOH A 68 568 568 HOH HOH . 
D 4 HOH A 69 569 569 HOH HOH . 
D 4 HOH A 70 570 570 HOH HOH . 
D 4 HOH A 71 571 571 HOH HOH . 
D 4 HOH A 72 572 572 HOH HOH . 
D 4 HOH A 73 573 573 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 FPS . . . C 3 38.365 27.669 14.771 1 59.11 ? C1 FPS 400 A 1 
HETATM 2 S S1 FPS . . . C 3 37.15 26.725 15.298 1 81.84 ? S1 FPS 400 A 1 
HETATM 3 C C2 FPS . . . C 3 38.068 29.123 15.013 1 54.01 ? C2 FPS 400 A 1 
HETATM 4 C C3 FPS . . . C 3 37.841 29.858 16.188 1 51.95 ? C3 FPS 400 A 1 
HETATM 5 C C4 FPS . . . C 3 38.331 29.358 17.57 1 54.61 ? C4 FPS 400 A 1 
HETATM 6 C C5 FPS . . . C 3 37.099 31.211 16.098 1 54.79 ? C5 FPS 400 A 1 
HETATM 7 C C6 FPS . . . C 3 35.605 31.021 15.943 1 51.55 ? C6 FPS 400 A 1 
HETATM 8 C C7 FPS . . . C 3 34.76 31.878 16.97 1 51.29 ? C7 FPS 400 A 1 
HETATM 9 C C8 FPS . . . C 3 34.019 33.099 16.578 1 52.67 ? C8 FPS 400 A 1 
HETATM 10 C C10 FPS . . . C 3 32.557 33.253 17.01 1 55.26 ? C10 FPS 400 A 1 
HETATM 11 C C9 FPS . . . C 3 34.717 34.196 15.748 1 51.77 ? C9 FPS 400 A 1 
HETATM 12 C C11 FPS . . . C 3 32.298 34.409 18.026 1 52.26 ? C11 FPS 400 A 1 
HETATM 13 C C12 FPS . . . C 3 31.311 33.954 19.115 1 52.68 ? C12 FPS 400 A 1 
HETATM 14 C C13 FPS . . . C 3 31.744 33.853 20.485 1 52.14 ? C13 FPS 400 A 1 
HETATM 15 C C14 FPS . . . C 3 31.748 35.115 21.382 1 54.11 ? C14 FPS 400 A 1 
HETATM 16 C C15 FPS . . . C 3 32.2 32.459 21.059 1 53.54 ? C15 FPS 400 A 1 
HETATM 17 P PA FPS . . . C 3 35.918 26.515 14.092 1 100.48 ? PA FPS 400 A 1 
HETATM 18 O O1A FPS . . . C 3 34.6 26.32 14.771 1 98.62 ? O1A FPS 400 A 1 
HETATM 19 O O2A FPS . . . C 3 35.761 27.791 13.08 1 99.52 ? O2A FPS 400 A 1 
HETATM 20 O O3A FPS . . . C 3 36.325 25.277 13.22 1 100.27 ? O3A FPS 400 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#