data_2R4E # _model_server_result.job_id alKChoQrlycyp8CSUr1_Hg _model_server_result.datetime_utc '2024-11-15 05:41:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":1956}' # _entry.id 2R4E # _exptl.entry_id 2R4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R4E _cell.length_a 113.848 _cell.length_b 113.822 _cell.length_c 193.133 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,IA 1 1 B,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,JA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 K N N ? 6 M N N ? 6 N N N ? 6 O N N ? 6 P N N ? 6 Q N N ? 6 Y N N ? 6 Z N N ? 6 AA N N ? 6 BA N N ? 6 CA N N ? 6 DA N N ? 6 FA N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 147 n n C1 C2 EDO sing 148 n n C1 H11 EDO sing 149 n n C1 H12 EDO sing 150 n n O1 HO1 EDO sing 151 n n C2 O2 EDO sing 152 n n C2 H21 EDO sing 153 n n C2 H22 EDO sing 154 n n O2 HO2 EDO sing 155 n n # _atom_sites.entry_id 2R4E _atom_sites.fract_transf_matrix[1][1] 0.008784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BOG A 1 1949 1949 BOG BOG . D 2 BOG A 1 1950 1949 BOG BOG . E 2 BOG A 1 1951 1949 BOG BOG . F 2 BOG A 1 1952 1949 BOG BOG . G 3 PO4 A 1 1953 1 PO4 PO4 . H 3 PO4 A 1 1954 1 PO4 PO4 . I 4 FAD A 1 600 600 FAD FAD . J 5 13P A 1 1955 1 13P 13P . K 6 EDO A 1 1956 1 EDO EDO . L 7 IMD A 1 1957 1 IMD IMD . M 6 EDO A 1 1958 1 EDO EDO . N 6 EDO A 1 1959 1 EDO EDO . O 6 EDO A 1 1960 1 EDO EDO . P 6 EDO A 1 1961 1 EDO EDO . Q 6 EDO A 1 1962 1 EDO EDO . R 8 T3A A 1 7066 7066 T3A T3A . S 2 BOG B 1 1949 1949 BOG BOG . T 2 BOG B 1 1950 1949 BOG BOG . U 3 PO4 B 1 1951 1 PO4 PO4 . V 3 PO4 B 1 1952 1 PO4 PO4 . W 3 PO4 B 1 1953 1 PO4 PO4 . X 4 FAD B 1 600 600 FAD FAD . Y 6 EDO B 1 1954 1 EDO EDO . Z 6 EDO B 1 1955 1 EDO EDO . AA 6 EDO B 1 1956 1 EDO EDO . BA 6 EDO B 1 1957 1 EDO EDO . CA 6 EDO B 1 1958 1 EDO EDO . DA 6 EDO B 1 1959 1 EDO EDO . EA 7 IMD B 1 1960 1 IMD IMD . FA 6 EDO B 1 1961 1 EDO EDO . GA 8 T3A B 1 7066 7066 T3A T3A . HA 5 13P B 1 7067 1 13P 13P . IA 9 HOH A 1 7067 1 HOH HOH . IA 9 HOH A 2 7068 2 HOH HOH . IA 9 HOH A 3 7069 3 HOH HOH . IA 9 HOH A 4 7070 6 HOH HOH . IA 9 HOH A 5 7071 7 HOH HOH . IA 9 HOH A 6 7072 9 HOH HOH . IA 9 HOH A 7 7073 10 HOH HOH . IA 9 HOH A 8 7074 11 HOH HOH . IA 9 HOH A 9 7075 12 HOH HOH . IA 9 HOH A 10 7076 13 HOH HOH . IA 9 HOH A 11 7077 14 HOH HOH . IA 9 HOH A 12 7078 17 HOH HOH . IA 9 HOH A 13 7079 19 HOH HOH . IA 9 HOH A 14 7080 21 HOH HOH . IA 9 HOH A 15 7081 22 HOH HOH . IA 9 HOH A 16 7082 24 HOH HOH . IA 9 HOH A 17 7083 26 HOH HOH . IA 9 HOH A 18 7084 30 HOH HOH . IA 9 HOH A 19 7085 31 HOH HOH . IA 9 HOH A 20 7086 36 HOH HOH . IA 9 HOH A 21 7087 44 HOH HOH . IA 9 HOH A 22 7088 46 HOH HOH . IA 9 HOH A 23 7089 50 HOH HOH . IA 9 HOH A 24 7090 53 HOH HOH . IA 9 HOH A 25 7091 55 HOH HOH . IA 9 HOH A 26 7092 57 HOH HOH . IA 9 HOH A 27 7093 59 HOH HOH . IA 9 HOH A 28 7094 63 HOH HOH . IA 9 HOH A 29 7095 64 HOH HOH . IA 9 HOH A 30 7096 65 HOH HOH . IA 9 HOH A 31 7097 68 HOH HOH . IA 9 HOH A 32 7098 69 HOH HOH . IA 9 HOH A 33 7099 71 HOH HOH . IA 9 HOH A 34 7100 72 HOH HOH . IA 9 HOH A 35 7101 74 HOH HOH . IA 9 HOH A 36 7102 79 HOH HOH . IA 9 HOH A 37 7103 80 HOH HOH . IA 9 HOH A 38 7104 82 HOH HOH . IA 9 HOH A 39 7105 83 HOH HOH . IA 9 HOH A 40 7106 84 HOH HOH . IA 9 HOH A 41 7107 85 HOH HOH . IA 9 HOH A 42 7108 86 HOH HOH . IA 9 HOH A 43 7109 87 HOH HOH . IA 9 HOH A 44 7110 89 HOH HOH . IA 9 HOH A 45 7111 92 HOH HOH . IA 9 HOH A 46 7112 93 HOH HOH . IA 9 HOH A 47 7113 96 HOH HOH . IA 9 HOH A 48 7114 98 HOH HOH . IA 9 HOH A 49 7115 104 HOH HOH . IA 9 HOH A 50 7116 105 HOH HOH . IA 9 HOH A 51 7117 108 HOH HOH . IA 9 HOH A 52 7118 113 HOH HOH . IA 9 HOH A 53 7119 114 HOH HOH . IA 9 HOH A 54 7120 116 HOH HOH . IA 9 HOH A 55 7121 123 HOH HOH . IA 9 HOH A 56 7122 124 HOH HOH . IA 9 HOH A 57 7123 130 HOH HOH . IA 9 HOH A 58 7124 134 HOH HOH . IA 9 HOH A 59 7125 136 HOH HOH . IA 9 HOH A 60 7126 137 HOH HOH . IA 9 HOH A 61 7127 138 HOH HOH . IA 9 HOH A 62 7128 141 HOH HOH . IA 9 HOH A 63 7129 143 HOH HOH . IA 9 HOH A 64 7130 145 HOH HOH . IA 9 HOH A 65 7131 150 HOH HOH . IA 9 HOH A 66 7132 153 HOH HOH . IA 9 HOH A 67 7133 155 HOH HOH . IA 9 HOH A 68 7134 156 HOH HOH . IA 9 HOH A 69 7135 166 HOH HOH . IA 9 HOH A 70 7136 167 HOH HOH . IA 9 HOH A 71 7137 169 HOH HOH . IA 9 HOH A 72 7138 170 HOH HOH . IA 9 HOH A 73 7139 173 HOH HOH . IA 9 HOH A 74 7140 174 HOH HOH . IA 9 HOH A 75 7141 178 HOH HOH . IA 9 HOH A 76 7142 180 HOH HOH . IA 9 HOH A 77 7143 183 HOH HOH . IA 9 HOH A 78 7144 188 HOH HOH . IA 9 HOH A 79 7145 191 HOH HOH . IA 9 HOH A 80 7146 195 HOH HOH . IA 9 HOH A 81 7147 205 HOH HOH . IA 9 HOH A 82 7148 212 HOH HOH . IA 9 HOH A 83 7149 214 HOH HOH . IA 9 HOH A 84 7150 219 HOH HOH . IA 9 HOH A 85 7151 225 HOH HOH . IA 9 HOH A 86 7152 228 HOH HOH . IA 9 HOH A 87 7153 233 HOH HOH . IA 9 HOH A 88 7154 236 HOH HOH . IA 9 HOH A 89 7155 239 HOH HOH . IA 9 HOH A 90 7156 241 HOH HOH . IA 9 HOH A 91 7157 244 HOH HOH . IA 9 HOH A 92 7158 250 HOH HOH . IA 9 HOH A 93 7159 259 HOH HOH . IA 9 HOH A 94 7160 273 HOH HOH . IA 9 HOH A 95 7161 294 HOH HOH . IA 9 HOH A 96 7162 296 HOH HOH . IA 9 HOH A 97 7163 329 HOH HOH . IA 9 HOH A 98 7164 331 HOH HOH . IA 9 HOH A 99 7165 338 HOH HOH . IA 9 HOH A 100 7166 341 HOH HOH . IA 9 HOH A 101 7167 347 HOH HOH . IA 9 HOH A 102 7168 356 HOH HOH . IA 9 HOH A 103 7169 407 HOH HOH . IA 9 HOH A 104 7170 426 HOH HOH . IA 9 HOH A 105 7171 468 HOH HOH . IA 9 HOH A 106 7172 496 HOH HOH . IA 9 HOH A 107 7173 510 HOH HOH . IA 9 HOH A 108 7174 574 HOH HOH . IA 9 HOH A 109 7175 626 HOH HOH . IA 9 HOH A 110 7176 792 HOH HOH . IA 9 HOH A 111 7177 801 HOH HOH . IA 9 HOH A 112 7178 802 HOH HOH . IA 9 HOH A 113 7179 803 HOH HOH . IA 9 HOH A 114 7180 804 HOH HOH . IA 9 HOH A 115 7181 805 HOH HOH . IA 9 HOH A 116 7182 806 HOH HOH . IA 9 HOH A 117 7183 807 HOH HOH . IA 9 HOH A 118 7184 808 HOH HOH . IA 9 HOH A 119 7185 814 HOH HOH . IA 9 HOH A 120 7186 816 HOH HOH . IA 9 HOH A 121 7187 817 HOH HOH . IA 9 HOH A 122 7188 822 HOH HOH . IA 9 HOH A 123 7189 823 HOH HOH . IA 9 HOH A 124 7190 824 HOH HOH . IA 9 HOH A 125 7191 834 HOH HOH . IA 9 HOH A 126 7192 839 HOH HOH . IA 9 HOH A 127 7193 840 HOH HOH . IA 9 HOH A 128 7194 846 HOH HOH . IA 9 HOH A 129 7195 847 HOH HOH . IA 9 HOH A 130 7196 848 HOH HOH . IA 9 HOH A 131 7197 1 HOH HOH . JA 9 HOH B 1 7068 4 HOH HOH . JA 9 HOH B 2 7069 5 HOH HOH . JA 9 HOH B 3 7070 15 HOH HOH . JA 9 HOH B 4 7071 16 HOH HOH . JA 9 HOH B 5 7072 18 HOH HOH . JA 9 HOH B 6 7073 20 HOH HOH . JA 9 HOH B 7 7074 23 HOH HOH . JA 9 HOH B 8 7075 25 HOH HOH . JA 9 HOH B 9 7076 27 HOH HOH . JA 9 HOH B 10 7077 28 HOH HOH . JA 9 HOH B 11 7078 29 HOH HOH . JA 9 HOH B 12 7079 32 HOH HOH . JA 9 HOH B 13 7080 33 HOH HOH . JA 9 HOH B 14 7081 34 HOH HOH . JA 9 HOH B 15 7082 35 HOH HOH . JA 9 HOH B 16 7083 37 HOH HOH . JA 9 HOH B 17 7084 39 HOH HOH . JA 9 HOH B 18 7085 40 HOH HOH . JA 9 HOH B 19 7086 41 HOH HOH . JA 9 HOH B 20 7087 45 HOH HOH . JA 9 HOH B 21 7088 47 HOH HOH . JA 9 HOH B 22 7089 48 HOH HOH . JA 9 HOH B 23 7090 49 HOH HOH . JA 9 HOH B 24 7091 52 HOH HOH . JA 9 HOH B 25 7092 60 HOH HOH . JA 9 HOH B 26 7093 61 HOH HOH . JA 9 HOH B 27 7094 62 HOH HOH . JA 9 HOH B 28 7095 66 HOH HOH . JA 9 HOH B 29 7096 73 HOH HOH . JA 9 HOH B 30 7097 75 HOH HOH . JA 9 HOH B 31 7098 78 HOH HOH . JA 9 HOH B 32 7099 88 HOH HOH . JA 9 HOH B 33 7100 90 HOH HOH . JA 9 HOH B 34 7101 91 HOH HOH . JA 9 HOH B 35 7102 94 HOH HOH . JA 9 HOH B 36 7103 95 HOH HOH . JA 9 HOH B 37 7104 99 HOH HOH . JA 9 HOH B 38 7105 100 HOH HOH . JA 9 HOH B 39 7106 101 HOH HOH . JA 9 HOH B 40 7107 102 HOH HOH . JA 9 HOH B 41 7108 103 HOH HOH . JA 9 HOH B 42 7109 109 HOH HOH . JA 9 HOH B 43 7110 110 HOH HOH . JA 9 HOH B 44 7111 115 HOH HOH . JA 9 HOH B 45 7112 117 HOH HOH . JA 9 HOH B 46 7113 118 HOH HOH . JA 9 HOH B 47 7114 119 HOH HOH . JA 9 HOH B 48 7115 127 HOH HOH . JA 9 HOH B 49 7116 131 HOH HOH . JA 9 HOH B 50 7117 135 HOH HOH . JA 9 HOH B 51 7118 139 HOH HOH . JA 9 HOH B 52 7119 144 HOH HOH . JA 9 HOH B 53 7120 147 HOH HOH . JA 9 HOH B 54 7121 148 HOH HOH . JA 9 HOH B 55 7122 151 HOH HOH . JA 9 HOH B 56 7123 152 HOH HOH . JA 9 HOH B 57 7124 154 HOH HOH . JA 9 HOH B 58 7125 159 HOH HOH . JA 9 HOH B 59 7126 160 HOH HOH . JA 9 HOH B 60 7127 162 HOH HOH . JA 9 HOH B 61 7128 163 HOH HOH . JA 9 HOH B 62 7129 164 HOH HOH . JA 9 HOH B 63 7130 165 HOH HOH . JA 9 HOH B 64 7131 175 HOH HOH . JA 9 HOH B 65 7132 179 HOH HOH . JA 9 HOH B 66 7133 184 HOH HOH . JA 9 HOH B 67 7134 185 HOH HOH . JA 9 HOH B 68 7135 190 HOH HOH . JA 9 HOH B 69 7136 196 HOH HOH . JA 9 HOH B 70 7137 197 HOH HOH . JA 9 HOH B 71 7138 198 HOH HOH . JA 9 HOH B 72 7139 199 HOH HOH . JA 9 HOH B 73 7140 200 HOH HOH . JA 9 HOH B 74 7141 202 HOH HOH . JA 9 HOH B 75 7142 208 HOH HOH . JA 9 HOH B 76 7143 210 HOH HOH . JA 9 HOH B 77 7144 218 HOH HOH . JA 9 HOH B 78 7145 224 HOH HOH . JA 9 HOH B 79 7146 231 HOH HOH . JA 9 HOH B 80 7147 232 HOH HOH . JA 9 HOH B 81 7148 235 HOH HOH . JA 9 HOH B 82 7149 238 HOH HOH . JA 9 HOH B 83 7150 242 HOH HOH . JA 9 HOH B 84 7151 245 HOH HOH . JA 9 HOH B 85 7152 246 HOH HOH . JA 9 HOH B 86 7153 247 HOH HOH . JA 9 HOH B 87 7154 255 HOH HOH . JA 9 HOH B 88 7155 257 HOH HOH . JA 9 HOH B 89 7156 260 HOH HOH . JA 9 HOH B 90 7157 266 HOH HOH . JA 9 HOH B 91 7158 268 HOH HOH . JA 9 HOH B 92 7159 272 HOH HOH . JA 9 HOH B 93 7160 279 HOH HOH . JA 9 HOH B 94 7161 284 HOH HOH . JA 9 HOH B 95 7162 345 HOH HOH . JA 9 HOH B 96 7163 401 HOH HOH . JA 9 HOH B 97 7164 403 HOH HOH . JA 9 HOH B 98 7165 460 HOH HOH . JA 9 HOH B 99 7166 477 HOH HOH . JA 9 HOH B 100 7167 479 HOH HOH . JA 9 HOH B 101 7168 480 HOH HOH . JA 9 HOH B 102 7169 498 HOH HOH . JA 9 HOH B 103 7170 503 HOH HOH . JA 9 HOH B 104 7171 573 HOH HOH . JA 9 HOH B 105 7172 793 HOH HOH . JA 9 HOH B 106 7173 795 HOH HOH . JA 9 HOH B 107 7174 809 HOH HOH . JA 9 HOH B 108 7175 811 HOH HOH . JA 9 HOH B 109 7176 812 HOH HOH . JA 9 HOH B 110 7177 813 HOH HOH . JA 9 HOH B 111 7178 815 HOH HOH . JA 9 HOH B 112 7179 818 HOH HOH . JA 9 HOH B 113 7180 819 HOH HOH . JA 9 HOH B 114 7181 820 HOH HOH . JA 9 HOH B 115 7182 821 HOH HOH . JA 9 HOH B 116 7183 825 HOH HOH . JA 9 HOH B 117 7184 826 HOH HOH . JA 9 HOH B 118 7185 827 HOH HOH . JA 9 HOH B 119 7186 828 HOH HOH . JA 9 HOH B 120 7187 829 HOH HOH . JA 9 HOH B 121 7188 831 HOH HOH . JA 9 HOH B 122 7189 832 HOH HOH . JA 9 HOH B 123 7190 833 HOH HOH . JA 9 HOH B 124 7191 835 HOH HOH . JA 9 HOH B 125 7192 836 HOH HOH . JA 9 HOH B 126 7193 837 HOH HOH . JA 9 HOH B 127 7194 838 HOH HOH . JA 9 HOH B 128 7195 841 HOH HOH . JA 9 HOH B 129 7196 842 HOH HOH . JA 9 HOH B 130 7197 843 HOH HOH . JA 9 HOH B 131 7198 844 HOH HOH . JA 9 HOH B 132 7199 845 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . AA 6 21.228 38.698 30.546 1 44.87 ? C1 EDO 1956 B 1 HETATM 2 O O1 EDO . . . AA 6 22.153 39.734 30.925 1 42.17 ? O1 EDO 1956 B 1 HETATM 3 C C2 EDO . . . AA 6 21.784 37.818 29.443 1 44.84 ? C2 EDO 1956 B 1 HETATM 4 O O2 EDO . . . AA 6 20.807 36.832 29.069 1 49.19 ? O2 EDO 1956 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #