data_2R4V # _model_server_result.job_id DCtPhAWYq7RDu366o5v2tw _model_server_result.datetime_utc '2024-11-26 04:00:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r4v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":249}' # _entry.id 2R4V # _exptl.entry_id 2R4V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R4V _cell.length_a 44.015 _cell.length_b 74.722 _cell.length_c 79.827 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R4V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 30 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 30 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 33 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 33 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.199 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 2R4V _atom_sites.fract_transf_matrix[1][1] 0.02272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013383 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 248 1 GSH GTT . C 2 GSH A 1 249 2 GSH GTT . D 3 HOH A 1 250 1 HOH HOH . D 3 HOH A 2 251 2 HOH HOH . D 3 HOH A 3 252 3 HOH HOH . D 3 HOH A 4 253 4 HOH HOH . D 3 HOH A 5 254 5 HOH HOH . D 3 HOH A 6 255 6 HOH HOH . D 3 HOH A 7 256 7 HOH HOH . D 3 HOH A 8 257 8 HOH HOH . D 3 HOH A 9 258 9 HOH HOH . D 3 HOH A 10 259 10 HOH HOH . D 3 HOH A 11 260 12 HOH HOH . D 3 HOH A 12 261 13 HOH HOH . D 3 HOH A 13 262 14 HOH HOH . D 3 HOH A 14 263 15 HOH HOH . D 3 HOH A 15 264 16 HOH HOH . D 3 HOH A 16 265 17 HOH HOH . D 3 HOH A 17 266 18 HOH HOH . D 3 HOH A 18 267 19 HOH HOH . D 3 HOH A 19 268 20 HOH HOH . D 3 HOH A 20 269 21 HOH HOH . D 3 HOH A 21 270 22 HOH HOH . D 3 HOH A 22 271 23 HOH HOH . D 3 HOH A 23 272 24 HOH HOH . D 3 HOH A 24 273 25 HOH HOH . D 3 HOH A 25 274 26 HOH HOH . D 3 HOH A 26 275 28 HOH HOH . D 3 HOH A 27 276 29 HOH HOH . D 3 HOH A 28 277 30 HOH HOH . D 3 HOH A 29 278 31 HOH HOH . D 3 HOH A 30 279 32 HOH HOH . D 3 HOH A 31 280 35 HOH HOH . D 3 HOH A 32 281 36 HOH HOH . D 3 HOH A 33 282 37 HOH HOH . D 3 HOH A 34 283 39 HOH HOH . D 3 HOH A 35 284 40 HOH HOH . D 3 HOH A 36 285 41 HOH HOH . D 3 HOH A 37 286 42 HOH HOH . D 3 HOH A 38 287 43 HOH HOH . D 3 HOH A 39 288 44 HOH HOH . D 3 HOH A 40 289 45 HOH HOH . D 3 HOH A 41 290 46 HOH HOH . D 3 HOH A 42 291 47 HOH HOH . D 3 HOH A 43 292 50 HOH HOH . D 3 HOH A 44 293 52 HOH HOH . D 3 HOH A 45 294 53 HOH HOH . D 3 HOH A 46 295 55 HOH HOH . D 3 HOH A 47 296 56 HOH HOH . D 3 HOH A 48 297 57 HOH HOH . D 3 HOH A 49 298 58 HOH HOH . D 3 HOH A 50 299 60 HOH HOH . D 3 HOH A 51 300 61 HOH HOH . D 3 HOH A 52 301 62 HOH HOH . D 3 HOH A 53 302 63 HOH HOH . D 3 HOH A 54 303 64 HOH HOH . D 3 HOH A 55 304 65 HOH HOH . D 3 HOH A 56 305 66 HOH HOH . D 3 HOH A 57 306 67 HOH HOH . D 3 HOH A 58 307 68 HOH HOH . D 3 HOH A 59 308 69 HOH HOH . D 3 HOH A 60 309 70 HOH HOH . D 3 HOH A 61 310 71 HOH HOH . D 3 HOH A 62 311 72 HOH HOH . D 3 HOH A 63 312 73 HOH HOH . D 3 HOH A 64 313 74 HOH HOH . D 3 HOH A 65 314 75 HOH HOH . D 3 HOH A 66 315 76 HOH HOH . D 3 HOH A 67 316 77 HOH HOH . D 3 HOH A 68 317 78 HOH HOH . D 3 HOH A 69 318 79 HOH HOH . D 3 HOH A 70 319 80 HOH HOH . D 3 HOH A 71 320 81 HOH HOH . D 3 HOH A 72 321 82 HOH HOH . D 3 HOH A 73 322 83 HOH HOH . D 3 HOH A 74 323 84 HOH HOH . D 3 HOH A 75 324 85 HOH HOH . D 3 HOH A 76 325 86 HOH HOH . D 3 HOH A 77 326 88 HOH HOH . D 3 HOH A 78 327 89 HOH HOH . D 3 HOH A 79 328 90 HOH HOH . D 3 HOH A 80 329 91 HOH HOH . D 3 HOH A 81 330 92 HOH HOH . D 3 HOH A 82 331 93 HOH HOH . D 3 HOH A 83 332 94 HOH HOH . D 3 HOH A 84 333 95 HOH HOH . D 3 HOH A 85 334 96 HOH HOH . D 3 HOH A 86 335 97 HOH HOH . D 3 HOH A 87 336 98 HOH HOH . D 3 HOH A 88 337 100 HOH HOH . D 3 HOH A 89 338 101 HOH HOH . D 3 HOH A 90 339 102 HOH HOH . D 3 HOH A 91 340 103 HOH HOH . D 3 HOH A 92 341 105 HOH HOH . D 3 HOH A 93 342 107 HOH HOH . D 3 HOH A 94 343 108 HOH HOH . D 3 HOH A 95 344 120 HOH HOH . D 3 HOH A 96 345 121 HOH HOH . D 3 HOH A 97 346 122 HOH HOH . D 3 HOH A 98 347 123 HOH HOH . D 3 HOH A 99 348 124 HOH HOH . D 3 HOH A 100 349 125 HOH HOH . D 3 HOH A 101 350 126 HOH HOH . D 3 HOH A 102 351 127 HOH HOH . D 3 HOH A 103 352 128 HOH HOH . D 3 HOH A 104 353 129 HOH HOH . D 3 HOH A 105 354 130 HOH HOH . D 3 HOH A 106 355 131 HOH HOH . D 3 HOH A 107 356 132 HOH HOH . D 3 HOH A 108 357 133 HOH HOH . D 3 HOH A 109 358 134 HOH HOH . D 3 HOH A 110 359 135 HOH HOH . D 3 HOH A 111 360 137 HOH HOH . D 3 HOH A 112 361 138 HOH HOH . D 3 HOH A 113 362 140 HOH HOH . D 3 HOH A 114 363 143 HOH HOH . D 3 HOH A 115 364 147 HOH HOH . D 3 HOH A 116 365 148 HOH HOH . D 3 HOH A 117 366 149 HOH HOH . D 3 HOH A 118 367 150 HOH HOH . D 3 HOH A 119 368 151 HOH HOH . D 3 HOH A 120 369 152 HOH HOH . D 3 HOH A 121 370 153 HOH HOH . D 3 HOH A 122 371 154 HOH HOH . D 3 HOH A 123 372 156 HOH HOH . D 3 HOH A 124 373 165 HOH HOH . D 3 HOH A 125 374 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . C 2 34.651 31.84 10.513 1 59.06 ? N1 GSH 249 A 1 HETATM 2 C CA1 GSH . . . C 2 35.055 32.08 9.125 1 60.6 ? CA1 GSH 249 A 1 HETATM 3 C C1 GSH . . . C 2 36.344 31.571 8.59 1 59.24 ? C1 GSH 249 A 1 HETATM 4 O O11 GSH . . . C 2 36.905 32.234 7.706 1 59.4 ? O11 GSH 249 A 1 HETATM 5 O O12 GSH . . . C 2 36.885 30.54 9.024 1 60.05 ? O12 GSH 249 A 1 HETATM 6 C CB1 GSH . . . C 2 34.163 32.944 8.184 1 60.37 ? CB1 GSH 249 A 1 HETATM 7 C CG1 GSH . . . C 2 32.872 32.229 7.757 1 61.38 ? CG1 GSH 249 A 1 HETATM 8 C CD1 GSH . . . C 2 31.918 32.037 8.927 1 62.24 ? CD1 GSH 249 A 1 HETATM 9 O OE1 GSH . . . C 2 30.875 32.956 9.105 1 63.25 ? OE1 GSH 249 A 1 HETATM 10 N N2 GSH . . . C 2 32.085 31.009 9.756 1 64.63 ? N2 GSH 249 A 1 HETATM 11 C CA2 GSH . . . C 2 31.144 30.693 10.832 1 65.74 ? CA2 GSH 249 A 1 HETATM 12 C C2 GSH . . . C 2 30.858 31.631 11.97 1 66.85 ? C2 GSH 249 A 1 HETATM 13 O O2 GSH . . . C 2 30.786 31.129 13.293 1 69.42 ? O2 GSH 249 A 1 HETATM 14 C CB2 GSH . . . C 2 30.602 29.234 10.918 1 67.16 ? CB2 GSH 249 A 1 HETATM 15 S SG2 GSH . . . C 2 31.501 27.985 11.877 1 70.2 ? SG2 GSH 249 A 1 HETATM 16 N N3 GSH . . . C 2 30.616 32.907 11.64 1 65.98 ? N3 GSH 249 A 1 HETATM 17 C CA3 GSH . . . C 2 31.023 34.057 12.437 1 65.23 ? CA3 GSH 249 A 1 HETATM 18 C C3 GSH . . . C 2 30.168 35.254 12.103 1 64.59 ? C3 GSH 249 A 1 HETATM 19 O O31 GSH . . . C 2 30.516 36.08 11.236 1 63.93 ? O31 GSH 249 A 1 HETATM 20 O O32 GSH . . . C 2 29.079 35.435 12.679 1 64.99 ? O32 GSH 249 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 20 #