data_2R56 # _model_server_result.job_id xhDsSrvXMqi4I-gmHE2dmg _model_server_result.datetime_utc '2024-12-26 23:14:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r56 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":163}' # _entry.id 2R56 # _exptl.entry_id 2R56 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R56 _cell.length_a 67.04 _cell.length_b 100.64 _cell.length_c 168.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R56 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf4 B SG CYS 134 L CYS 134 1_555 B SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 C SG CYS 148 H CYS 148 1_555 C SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 D SG CYS 66 B CYS 66 1_555 D SG CYS 160 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 D SG CYS 106 B CYS 106 1_555 D SG CYS 119 B CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf9 E SG CYS 23 M CYS 23 1_555 E SG CYS 88 M CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf10 E SG CYS 134 M CYS 134 1_555 E SG CYS 194 M CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf11 F SG CYS 22 I CYS 22 1_555 F SG CYS 96 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf12 F SG CYS 148 I CYS 148 1_555 F SG CYS 204 I CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 192 n n C1B O1B LMT sing 193 n n C1B O5B LMT sing 194 n n C1B H1B LMT sing 195 n n C2B C3B LMT sing 196 n n C2B O2B LMT sing 197 n n C2B H2B LMT sing 198 n n C3B C4B LMT sing 199 n n C3B O3B LMT sing 200 n n C3B H3B LMT sing 201 n n C4B C5B LMT sing 202 n n C4B O4' LMT sing 203 n n C4B H4B LMT sing 204 n n C5B C6B LMT sing 205 n n C5B O5B LMT sing 206 n n C5B H5B LMT sing 207 n n C6B O6B LMT sing 208 n n C6B "H6'2" LMT sing 209 n n C6B "H6'1" LMT sing 210 n n O1B C4' LMT sing 211 n n O2B H2O1 LMT sing 212 n n O3B H3O1 LMT sing 213 n n O4' H4O1 LMT sing 214 n n O6B H6B LMT sing 215 n n C1' C2' LMT sing 216 n n C1' O1' LMT sing 217 n n C1' O5' LMT sing 218 n n C1' H1' LMT sing 219 n n C2' C3' LMT sing 220 n n C2' O2' LMT sing 221 n n C2' H2' LMT sing 222 n n C3' C4' LMT sing 223 n n C3' O3' LMT sing 224 n n C3' H3' LMT sing 225 n n C4' C5' LMT sing 226 n n C4' H4' LMT sing 227 n n C5' C6' LMT sing 228 n n C5' O5' LMT sing 229 n n C5' H5' LMT sing 230 n n C6' O6' LMT sing 231 n n C6' H6D LMT sing 232 n n C6' H6E LMT sing 233 n n O1' C1 LMT sing 234 n n O2' H2O2 LMT sing 235 n n O3' H3O2 LMT sing 236 n n O6' H6' LMT sing 237 n n C1 C2 LMT sing 238 n n C1 H12 LMT sing 239 n n C1 H11 LMT sing 240 n n C2 C3 LMT sing 241 n n C2 H22 LMT sing 242 n n C2 H21 LMT sing 243 n n C3 C4 LMT sing 244 n n C3 H32 LMT sing 245 n n C3 H31 LMT sing 246 n n C4 C5 LMT sing 247 n n C4 H42 LMT sing 248 n n C4 H41 LMT sing 249 n n C5 C6 LMT sing 250 n n C5 H52 LMT sing 251 n n C5 H51 LMT sing 252 n n C6 C7 LMT sing 253 n n C6 H62 LMT sing 254 n n C6 H61 LMT sing 255 n n C7 C8 LMT sing 256 n n C7 H72 LMT sing 257 n n C7 H71 LMT sing 258 n n C8 C9 LMT sing 259 n n C8 H82 LMT sing 260 n n C8 H81 LMT sing 261 n n C9 C10 LMT sing 262 n n C9 H92 LMT sing 263 n n C9 H91 LMT sing 264 n n C10 C11 LMT sing 265 n n C10 H102 LMT sing 266 n n C10 H101 LMT sing 267 n n C11 C12 LMT sing 268 n n C11 H112 LMT sing 269 n n C11 H111 LMT sing 270 n n C12 H123 LMT sing 271 n n C12 H122 LMT sing 272 n n C12 H121 LMT sing 273 n n # _atom_sites.entry_id 2R56 _atom_sites.fract_transf_matrix[1][1] 0.014916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009936 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005951 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 LMT A 1 163 1 LMT LMT . H 4 LMT B 1 163 1 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . G 4 1.077 -5.35 -2.489 1 73.27 ? C1B LMT 163 A 1 HETATM 2 C C2B LMT . . . G 4 2.087 -6.51 -2.262 1 74 ? C2B LMT 163 A 1 HETATM 3 C C3B LMT . . . G 4 2.534 -6.498 -0.775 1 75.3 ? C3B LMT 163 A 1 HETATM 4 C C4B LMT . . . G 4 3.214 -5.134 -0.492 1 75.57 ? C4B LMT 163 A 1 HETATM 5 C C5B LMT . . . G 4 2.179 -3.997 -0.768 1 75.71 ? C5B LMT 163 A 1 HETATM 6 C C6B LMT . . . G 4 2.848 -2.616 -0.507 1 76.05 ? C6B LMT 163 A 1 HETATM 7 O O1B LMT . . . G 4 -0.129 -5.546 -1.67 1 70.84 ? O1B LMT 163 A 1 HETATM 8 O O2B LMT . . . G 4 1.452 -7.757 -2.57 1 73.54 ? O2B LMT 163 A 1 HETATM 9 O O3B LMT . . . G 4 3.473 -7.562 -0.535 1 75.84 ? O3B LMT 163 A 1 HETATM 10 O O4' LMT . . . G 4 3.648 -5.08 0.886 1 75.26 ? O4' LMT 163 A 1 HETATM 11 O O5B LMT . . . G 4 1.725 -4.059 -2.166 1 74.97 ? O5B LMT 163 A 1 HETATM 12 O O6B LMT . . . G 4 1.924 -1.54 -0.754 1 75.75 ? O6B LMT 163 A 1 HETATM 13 C C1' LMT . . . G 4 -2.889 -4.312 -4.716 1 64.23 ? C1' LMT 163 A 1 HETATM 14 C C2' LMT . . . G 4 -2.584 -3.299 -3.584 1 66.14 ? C2' LMT 163 A 1 HETATM 15 C C3' LMT . . . G 4 -1.256 -3.686 -2.917 1 68.08 ? C3' LMT 163 A 1 HETATM 16 C C4' LMT . . . G 4 -1.384 -5.129 -2.349 1 68.66 ? C4' LMT 163 A 1 HETATM 17 C C5' LMT . . . G 4 -1.761 -6.091 -3.546 1 67.22 ? C5' LMT 163 A 1 HETATM 18 C C6' LMT . . . G 4 -1.939 -7.517 -3.017 1 67.68 ? C6' LMT 163 A 1 HETATM 19 O O1' LMT . . . G 4 -4.128 -3.905 -5.302 1 60.32 ? O1' LMT 163 A 1 HETATM 20 O O2' LMT . . . G 4 -2.473 -1.971 -4.126 1 66.14 ? O2' LMT 163 A 1 HETATM 21 O O3' LMT . . . G 4 -0.939 -2.765 -1.856 1 68.63 ? O3' LMT 163 A 1 HETATM 22 O O5' LMT . . . G 4 -3.011 -5.665 -4.17 1 65.58 ? O5' LMT 163 A 1 HETATM 23 O O6' LMT . . . G 4 -2.292 -8.387 -4.094 1 67.74 ? O6' LMT 163 A 1 HETATM 24 C C1 LMT . . . G 4 -4.541 -4.755 -6.374 1 54.47 ? C1 LMT 163 A 1 HETATM 25 C C2 LMT . . . G 4 -5.853 -4.127 -6.83 1 48.57 ? C2 LMT 163 A 1 HETATM 26 C C3 LMT . . . G 4 -6.527 -4.839 -7.986 1 43.33 ? C3 LMT 163 A 1 HETATM 27 C C4 LMT . . . G 4 -7.789 -4.023 -8.262 1 38.69 ? C4 LMT 163 A 1 HETATM 28 C C5 LMT . . . G 4 -8.59 -4.592 -9.414 1 35.48 ? C5 LMT 163 A 1 HETATM 29 C C6 LMT . . . G 4 -9.811 -3.701 -9.618 1 32.62 ? C6 LMT 163 A 1 HETATM 30 C C7 LMT . . . G 4 -10.634 -4.231 -10.781 1 31.57 ? C7 LMT 163 A 1 HETATM 31 C C8 LMT . . . G 4 -11.861 -3.353 -10.995 1 29.11 ? C8 LMT 163 A 1 HETATM 32 C C9 LMT . . . G 4 -12.671 -3.921 -12.154 1 27.99 ? C9 LMT 163 A 1 HETATM 33 C C10 LMT . . . G 4 -13.92 -3.089 -12.391 1 26.53 ? C10 LMT 163 A 1 HETATM 34 C C11 LMT . . . G 4 -14.714 -3.697 -13.543 1 26.59 ? C11 LMT 163 A 1 HETATM 35 C C12 LMT . . . G 4 -15.976 -2.873 -13.783 1 28.05 ? C12 LMT 163 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #