data_2R8N # _model_server_result.job_id X_1qxnR_7gi1Pe1y8bcsag _model_server_result.datetime_utc '2024-12-22 08:51:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r8n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 2R8N # _exptl.entry_id 2R8N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R8N _cell.length_a 46.711 _cell.length_b 46.711 _cell.length_c 100.708 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R8N _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2R8N _atom_sites.fract_transf_matrix[1][1] 0.021408 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00993 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 300 300 GOL GOL . C 2 GOL A 1 301 301 GOL GOL . D 3 HOH A 1 302 2001 HOH HOH . D 3 HOH A 2 303 2002 HOH HOH . D 3 HOH A 3 304 2003 HOH HOH . D 3 HOH A 4 305 2004 HOH HOH . D 3 HOH A 5 306 2005 HOH HOH . D 3 HOH A 6 307 2006 HOH HOH . D 3 HOH A 7 308 2007 HOH HOH . D 3 HOH A 8 309 2008 HOH HOH . D 3 HOH A 9 310 2009 HOH HOH . D 3 HOH A 10 311 2010 HOH HOH . D 3 HOH A 11 312 2011 HOH HOH . D 3 HOH A 12 313 2012 HOH HOH . D 3 HOH A 13 314 2013 HOH HOH . D 3 HOH A 14 315 2014 HOH HOH . D 3 HOH A 15 316 2015 HOH HOH . D 3 HOH A 16 317 2016 HOH HOH . D 3 HOH A 17 318 2017 HOH HOH . D 3 HOH A 18 319 2018 HOH HOH . D 3 HOH A 19 320 2019 HOH HOH . D 3 HOH A 20 321 2020 HOH HOH . D 3 HOH A 21 322 2021 HOH HOH . D 3 HOH A 22 323 2022 HOH HOH . D 3 HOH A 23 324 2023 HOH HOH . D 3 HOH A 24 325 2024 HOH HOH . D 3 HOH A 25 326 2025 HOH HOH . D 3 HOH A 26 327 2026 HOH HOH . D 3 HOH A 27 328 2027 HOH HOH . D 3 HOH A 28 329 2028 HOH HOH . D 3 HOH A 29 330 2029 HOH HOH . D 3 HOH A 30 331 2030 HOH HOH . D 3 HOH A 31 332 2031 HOH HOH . D 3 HOH A 32 333 2032 HOH HOH . D 3 HOH A 33 334 2033 HOH HOH . D 3 HOH A 34 335 2034 HOH HOH . D 3 HOH A 35 336 2035 HOH HOH . D 3 HOH A 36 337 2036 HOH HOH . D 3 HOH A 37 338 2037 HOH HOH . D 3 HOH A 38 339 2038 HOH HOH . D 3 HOH A 39 340 2039 HOH HOH . D 3 HOH A 40 341 2040 HOH HOH . D 3 HOH A 41 342 2041 HOH HOH . D 3 HOH A 42 343 2042 HOH HOH . D 3 HOH A 43 344 2043 HOH HOH . D 3 HOH A 44 345 2044 HOH HOH . D 3 HOH A 45 346 2045 HOH HOH . D 3 HOH A 46 347 2046 HOH HOH . D 3 HOH A 47 348 2047 HOH HOH . D 3 HOH A 48 349 2048 HOH HOH . D 3 HOH A 49 350 2049 HOH HOH . D 3 HOH A 50 351 2050 HOH HOH . D 3 HOH A 51 352 2051 HOH HOH . D 3 HOH A 52 353 2052 HOH HOH . D 3 HOH A 53 354 2053 HOH HOH . D 3 HOH A 54 355 2054 HOH HOH . D 3 HOH A 55 356 2055 HOH HOH . D 3 HOH A 56 357 2056 HOH HOH . D 3 HOH A 57 358 2057 HOH HOH . D 3 HOH A 58 359 2058 HOH HOH . D 3 HOH A 59 360 2059 HOH HOH . D 3 HOH A 60 361 2060 HOH HOH . D 3 HOH A 61 362 2061 HOH HOH . D 3 HOH A 62 363 2062 HOH HOH . D 3 HOH A 63 364 2063 HOH HOH . D 3 HOH A 64 365 2064 HOH HOH . D 3 HOH A 65 366 2065 HOH HOH . D 3 HOH A 66 367 2066 HOH HOH . D 3 HOH A 67 368 2067 HOH HOH . D 3 HOH A 68 369 2068 HOH HOH . D 3 HOH A 69 370 2069 HOH HOH . D 3 HOH A 70 371 2070 HOH HOH . D 3 HOH A 71 372 2071 HOH HOH . D 3 HOH A 72 373 2072 HOH HOH . D 3 HOH A 73 374 2073 HOH HOH . D 3 HOH A 74 375 2074 HOH HOH . D 3 HOH A 75 376 2075 HOH HOH . D 3 HOH A 76 377 2076 HOH HOH . D 3 HOH A 77 378 2077 HOH HOH . D 3 HOH A 78 379 2078 HOH HOH . D 3 HOH A 79 380 2079 HOH HOH . D 3 HOH A 80 381 2080 HOH HOH . D 3 HOH A 81 382 2081 HOH HOH . D 3 HOH A 82 383 2082 HOH HOH . D 3 HOH A 83 384 2083 HOH HOH . D 3 HOH A 84 385 2084 HOH HOH . D 3 HOH A 85 386 2085 HOH HOH . D 3 HOH A 86 387 2086 HOH HOH . D 3 HOH A 87 388 2087 HOH HOH . D 3 HOH A 88 389 2088 HOH HOH . D 3 HOH A 89 390 2089 HOH HOH . D 3 HOH A 90 391 2090 HOH HOH . D 3 HOH A 91 392 2091 HOH HOH . D 3 HOH A 92 393 2092 HOH HOH . D 3 HOH A 93 394 2093 HOH HOH . D 3 HOH A 94 395 2094 HOH HOH . D 3 HOH A 95 396 2095 HOH HOH . D 3 HOH A 96 397 2096 HOH HOH . D 3 HOH A 97 398 2097 HOH HOH . D 3 HOH A 98 399 2098 HOH HOH . D 3 HOH A 99 400 2099 HOH HOH . D 3 HOH A 100 401 2100 HOH HOH . D 3 HOH A 101 402 2101 HOH HOH . D 3 HOH A 102 403 2102 HOH HOH . D 3 HOH A 103 404 2103 HOH HOH . D 3 HOH A 104 405 2104 HOH HOH . D 3 HOH A 105 406 2105 HOH HOH . D 3 HOH A 106 407 2106 HOH HOH . D 3 HOH A 107 408 2107 HOH HOH . D 3 HOH A 108 409 2108 HOH HOH . D 3 HOH A 109 410 2109 HOH HOH . D 3 HOH A 110 411 2110 HOH HOH . D 3 HOH A 111 412 2111 HOH HOH . D 3 HOH A 112 413 2112 HOH HOH . D 3 HOH A 113 414 2113 HOH HOH . D 3 HOH A 114 415 2114 HOH HOH . D 3 HOH A 115 416 2115 HOH HOH . D 3 HOH A 116 417 2116 HOH HOH . D 3 HOH A 117 418 2117 HOH HOH . D 3 HOH A 118 419 2118 HOH HOH . D 3 HOH A 119 420 2119 HOH HOH . D 3 HOH A 120 421 2120 HOH HOH . D 3 HOH A 121 422 2121 HOH HOH . D 3 HOH A 122 423 2122 HOH HOH . D 3 HOH A 123 424 2123 HOH HOH . D 3 HOH A 124 425 2124 HOH HOH . D 3 HOH A 125 426 2125 HOH HOH . D 3 HOH A 126 427 2126 HOH HOH . D 3 HOH A 127 428 2127 HOH HOH . D 3 HOH A 128 429 2128 HOH HOH . D 3 HOH A 129 430 2129 HOH HOH . D 3 HOH A 130 431 2130 HOH HOH . D 3 HOH A 131 432 2131 HOH HOH . D 3 HOH A 132 433 2132 HOH HOH . D 3 HOH A 133 434 2133 HOH HOH . D 3 HOH A 134 435 2134 HOH HOH . D 3 HOH A 135 436 2135 HOH HOH . D 3 HOH A 136 437 2136 HOH HOH . D 3 HOH A 137 438 2137 HOH HOH . D 3 HOH A 138 439 2138 HOH HOH . D 3 HOH A 139 440 2139 HOH HOH . D 3 HOH A 140 441 2140 HOH HOH . D 3 HOH A 141 442 2141 HOH HOH . D 3 HOH A 142 443 2142 HOH HOH . D 3 HOH A 143 444 2143 HOH HOH . D 3 HOH A 144 445 2144 HOH HOH . D 3 HOH A 145 446 2145 HOH HOH . D 3 HOH A 146 447 2146 HOH HOH . D 3 HOH A 147 448 2147 HOH HOH . D 3 HOH A 148 449 2148 HOH HOH . D 3 HOH A 149 450 2149 HOH HOH . D 3 HOH A 150 451 2150 HOH HOH . D 3 HOH A 151 452 2151 HOH HOH . D 3 HOH A 152 453 2152 HOH HOH . D 3 HOH A 153 454 2153 HOH HOH . D 3 HOH A 154 455 2154 HOH HOH . D 3 HOH A 155 456 2155 HOH HOH . D 3 HOH A 156 457 2156 HOH HOH . D 3 HOH A 157 458 2157 HOH HOH . D 3 HOH A 158 459 2158 HOH HOH . D 3 HOH A 159 460 2159 HOH HOH . D 3 HOH A 160 461 2160 HOH HOH . D 3 HOH A 161 462 2161 HOH HOH . D 3 HOH A 162 463 2162 HOH HOH . D 3 HOH A 163 464 2163 HOH HOH . D 3 HOH A 164 465 2164 HOH HOH . D 3 HOH A 165 466 2165 HOH HOH . D 3 HOH A 166 467 2166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 46.829 43.914 -23.564 1 18.08 ? C1 GOL 300 A 1 HETATM 2 O O1 GOL . . . B 2 46.061 43.873 -22.387 1 14.38 ? O1 GOL 300 A 1 HETATM 3 C C2 GOL . . . B 2 47.279 42.546 -24.017 1 20.12 ? C2 GOL 300 A 1 HETATM 4 O O2 GOL . . . B 2 48.421 42.034 -23.308 1 13.23 ? O2 GOL 300 A 1 HETATM 5 C C3 GOL . . . B 2 46.031 41.667 -23.885 1 23.1 ? C3 GOL 300 A 1 HETATM 6 O O3 GOL . . . B 2 45.179 42.159 -24.948 1 31.32 ? O3 GOL 300 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #