data_2R8T # _model_server_result.job_id ZB-ZaYc0gKOh9qsC85GASA _model_server_result.datetime_utc '2025-07-03 13:34:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2r8t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":337}' # _entry.id 2R8T # _exptl.entry_id 2R8T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2R8T _cell.length_a 91.596 _cell.length_b 91.596 _cell.length_c 85.385 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2R8T _symmetry.cell_setting ? _symmetry.Int_Tables_number 89 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FBP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FBP doub 83 n n P1 O2P FBP sing 84 n n P1 O3P FBP sing 85 n n P1 O1 FBP sing 86 n n O2P HOP2 FBP sing 87 n n O3P HOP3 FBP sing 88 n n O1 C1 FBP sing 89 n n C1 C2 FBP sing 90 n n C1 H11 FBP sing 91 n n C1 H12 FBP sing 92 n n C2 O2 FBP sing 93 n n C2 C3 FBP sing 94 n n C2 O5 FBP sing 95 n n O2 HO2 FBP sing 96 n n C3 O3 FBP sing 97 n n C3 C4 FBP sing 98 n n C3 H3 FBP sing 99 n n O3 HO3 FBP sing 100 n n C4 O4 FBP sing 101 n n C4 C5 FBP sing 102 n n C4 H4 FBP sing 103 n n O4 HO4 FBP sing 104 n n C5 O5 FBP sing 105 n n C5 C6 FBP sing 106 n n C5 H5 FBP sing 107 n n C6 O6 FBP sing 108 n n C6 H61 FBP sing 109 n n C6 H62 FBP sing 110 n n O6 P2 FBP sing 111 n n P2 O4P FBP doub 112 n n P2 O5P FBP sing 113 n n P2 O6P FBP sing 114 n n O5P HOP5 FBP sing 115 n n O6P HOP6 FBP sing 116 n n # _pdbx_chem_comp_identifier.comp_id FBP _pdbx_chem_comp_identifier.identifier b-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2R8T _atom_sites.fract_transf_matrix[1][1] 0.010918 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010918 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FBP A 1 337 1 FBP FBP . C 3 UNX A 1 338 1 UNX UNX . D 3 UNX A 1 339 2 UNX UNX . E 3 UNX A 1 340 3 UNX UNX . F 4 HOH A 1 341 1 HOH HOH . F 4 HOH A 2 342 2 HOH HOH . F 4 HOH A 3 343 3 HOH HOH . F 4 HOH A 4 344 4 HOH HOH . F 4 HOH A 5 345 5 HOH HOH . F 4 HOH A 6 346 6 HOH HOH . F 4 HOH A 7 347 7 HOH HOH . F 4 HOH A 8 348 8 HOH HOH . F 4 HOH A 9 349 9 HOH HOH . F 4 HOH A 10 350 10 HOH HOH . F 4 HOH A 11 351 11 HOH HOH . F 4 HOH A 12 352 12 HOH HOH . F 4 HOH A 13 353 13 HOH HOH . F 4 HOH A 14 354 14 HOH HOH . F 4 HOH A 15 355 16 HOH HOH . F 4 HOH A 16 356 17 HOH HOH . F 4 HOH A 17 357 18 HOH HOH . F 4 HOH A 18 358 19 HOH HOH . F 4 HOH A 19 359 20 HOH HOH . F 4 HOH A 20 360 21 HOH HOH . F 4 HOH A 21 361 22 HOH HOH . F 4 HOH A 22 362 23 HOH HOH . F 4 HOH A 23 363 24 HOH HOH . F 4 HOH A 24 364 25 HOH HOH . F 4 HOH A 25 365 26 HOH HOH . F 4 HOH A 26 366 27 HOH HOH . F 4 HOH A 27 367 28 HOH HOH . F 4 HOH A 28 368 29 HOH HOH . F 4 HOH A 29 369 30 HOH HOH . F 4 HOH A 30 370 31 HOH HOH . F 4 HOH A 31 371 32 HOH HOH . F 4 HOH A 32 372 33 HOH HOH . F 4 HOH A 33 373 34 HOH HOH . F 4 HOH A 34 374 35 HOH HOH . F 4 HOH A 35 375 36 HOH HOH . F 4 HOH A 36 376 37 HOH HOH . F 4 HOH A 37 377 38 HOH HOH . F 4 HOH A 38 378 39 HOH HOH . F 4 HOH A 39 379 40 HOH HOH . F 4 HOH A 40 380 41 HOH HOH . F 4 HOH A 41 381 42 HOH HOH . F 4 HOH A 42 382 44 HOH HOH . F 4 HOH A 43 383 45 HOH HOH . F 4 HOH A 44 384 46 HOH HOH . F 4 HOH A 45 385 47 HOH HOH . F 4 HOH A 46 386 48 HOH HOH . F 4 HOH A 47 387 49 HOH HOH . F 4 HOH A 48 388 50 HOH HOH . F 4 HOH A 49 389 51 HOH HOH . F 4 HOH A 50 390 52 HOH HOH . F 4 HOH A 51 391 53 HOH HOH . F 4 HOH A 52 392 54 HOH HOH . F 4 HOH A 53 393 56 HOH HOH . F 4 HOH A 54 394 57 HOH HOH . F 4 HOH A 55 395 59 HOH HOH . F 4 HOH A 56 396 60 HOH HOH . F 4 HOH A 57 397 61 HOH HOH . F 4 HOH A 58 398 65 HOH HOH . F 4 HOH A 59 399 67 HOH HOH . F 4 HOH A 60 400 70 HOH HOH . F 4 HOH A 61 401 71 HOH HOH . F 4 HOH A 62 402 72 HOH HOH . F 4 HOH A 63 403 74 HOH HOH . F 4 HOH A 64 404 75 HOH HOH . F 4 HOH A 65 405 76 HOH HOH . F 4 HOH A 66 406 77 HOH HOH . F 4 HOH A 67 407 78 HOH HOH . F 4 HOH A 68 408 79 HOH HOH . F 4 HOH A 69 409 80 HOH HOH . F 4 HOH A 70 410 81 HOH HOH . F 4 HOH A 71 411 82 HOH HOH . F 4 HOH A 72 412 83 HOH HOH . F 4 HOH A 73 413 84 HOH HOH . F 4 HOH A 74 414 85 HOH HOH . F 4 HOH A 75 415 87 HOH HOH . F 4 HOH A 76 416 88 HOH HOH . F 4 HOH A 77 417 89 HOH HOH . F 4 HOH A 78 418 90 HOH HOH . F 4 HOH A 79 419 91 HOH HOH . F 4 HOH A 80 420 92 HOH HOH . F 4 HOH A 81 421 93 HOH HOH . F 4 HOH A 82 422 94 HOH HOH . F 4 HOH A 83 423 95 HOH HOH . F 4 HOH A 84 424 96 HOH HOH . F 4 HOH A 85 425 97 HOH HOH . F 4 HOH A 86 426 98 HOH HOH . F 4 HOH A 87 427 99 HOH HOH . F 4 HOH A 88 428 100 HOH HOH . F 4 HOH A 89 429 101 HOH HOH . F 4 HOH A 90 430 102 HOH HOH . F 4 HOH A 91 431 103 HOH HOH . F 4 HOH A 92 432 104 HOH HOH . F 4 HOH A 93 433 106 HOH HOH . F 4 HOH A 94 434 107 HOH HOH . F 4 HOH A 95 435 108 HOH HOH . F 4 HOH A 96 436 109 HOH HOH . F 4 HOH A 97 437 110 HOH HOH . F 4 HOH A 98 438 111 HOH HOH . F 4 HOH A 99 439 112 HOH HOH . F 4 HOH A 100 440 113 HOH HOH . F 4 HOH A 101 441 114 HOH HOH . F 4 HOH A 102 442 115 HOH HOH . F 4 HOH A 103 443 116 HOH HOH . F 4 HOH A 104 444 117 HOH HOH . F 4 HOH A 105 445 118 HOH HOH . F 4 HOH A 106 446 119 HOH HOH . F 4 HOH A 107 447 120 HOH HOH . F 4 HOH A 108 448 121 HOH HOH . F 4 HOH A 109 449 122 HOH HOH . F 4 HOH A 110 450 123 HOH HOH . F 4 HOH A 111 451 124 HOH HOH . F 4 HOH A 112 452 125 HOH HOH . F 4 HOH A 113 453 126 HOH HOH . F 4 HOH A 114 454 127 HOH HOH . F 4 HOH A 115 455 128 HOH HOH . F 4 HOH A 116 456 129 HOH HOH . F 4 HOH A 117 457 130 HOH HOH . F 4 HOH A 118 458 131 HOH HOH . F 4 HOH A 119 459 132 HOH HOH . F 4 HOH A 120 460 133 HOH HOH . F 4 HOH A 121 461 134 HOH HOH . F 4 HOH A 122 462 135 HOH HOH . F 4 HOH A 123 463 136 HOH HOH . F 4 HOH A 124 464 137 HOH HOH . F 4 HOH A 125 465 138 HOH HOH . F 4 HOH A 126 466 139 HOH HOH . F 4 HOH A 127 467 140 HOH HOH . F 4 HOH A 128 468 141 HOH HOH . F 4 HOH A 129 469 142 HOH HOH . F 4 HOH A 130 470 143 HOH HOH . F 4 HOH A 131 471 144 HOH HOH . F 4 HOH A 132 472 145 HOH HOH . F 4 HOH A 133 473 146 HOH HOH . F 4 HOH A 134 474 148 HOH HOH . F 4 HOH A 135 475 150 HOH HOH . F 4 HOH A 136 476 151 HOH HOH . F 4 HOH A 137 477 152 HOH HOH . F 4 HOH A 138 478 153 HOH HOH . F 4 HOH A 139 479 155 HOH HOH . F 4 HOH A 140 480 156 HOH HOH . F 4 HOH A 141 481 157 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FBP . . . B 2 33.271 -0.653 16.199 1 42.61 ? P1 FBP 337 A 1 HETATM 2 O O1P FBP . . . B 2 32.363 -0.501 14.966 1 46.83 ? O1P FBP 337 A 1 HETATM 3 O O2P FBP . . . B 2 32.339 -1.08 17.351 1 41.93 ? O2P FBP 337 A 1 HETATM 4 O O3P FBP . . . B 2 34.362 -1.67 15.911 1 39.88 ? O3P FBP 337 A 1 HETATM 5 O O1 FBP . . . B 2 33.927 0.806 16.478 1 38.07 ? O1 FBP 337 A 1 HETATM 6 C C1 FBP . . . B 2 33.174 1.791 17.124 1 39.35 ? C1 FBP 337 A 1 HETATM 7 C C2 FBP . . . B 2 33.606 3.131 16.566 1 38.91 ? C2 FBP 337 A 1 HETATM 8 O O2 FBP . . . B 2 35.047 3.29 16.659 1 37.05 ? O2 FBP 337 A 1 HETATM 9 C C3 FBP . . . B 2 32.92 4.254 17.318 1 39.02 ? C3 FBP 337 A 1 HETATM 10 O O3 FBP . . . B 2 33.61 4.545 18.513 1 37.05 ? O3 FBP 337 A 1 HETATM 11 C C4 FBP . . . B 2 32.96 5.379 16.282 1 39.04 ? C4 FBP 337 A 1 HETATM 12 O O4 FBP . . . B 2 31.955 6.356 16.488 1 37.85 ? O4 FBP 337 A 1 HETATM 13 C C5 FBP . . . B 2 32.78 4.612 14.983 1 39.37 ? C5 FBP 337 A 1 HETATM 14 O O5 FBP . . . B 2 33.194 3.263 15.223 1 39.34 ? O5 FBP 337 A 1 HETATM 15 C C6 FBP . . . B 2 33.592 5.224 13.839 1 41.15 ? C6 FBP 337 A 1 HETATM 16 O O6 FBP . . . B 2 33.251 4.518 12.646 1 43.17 ? O6 FBP 337 A 1 HETATM 17 P P2 FBP . . . B 2 34.261 4.137 11.439 1 42.13 ? P2 FBP 337 A 1 HETATM 18 O O4P FBP . . . B 2 35.127 2.945 11.829 1 44.4 ? O4P FBP 337 A 1 HETATM 19 O O5P FBP . . . B 2 35.162 5.317 11.125 1 41.81 ? O5P FBP 337 A 1 HETATM 20 O O6P FBP . . . B 2 33.411 3.705 10.264 1 43.03 ? O6P FBP 337 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 20 #