data_2RA0 # _model_server_result.job_id DbRqtO-F8AFHfs79iqokdA _model_server_result.datetime_utc '2024-12-21 17:12:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ra0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 2RA0 # _exptl.entry_id 2RA0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 528.513 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(3-amino-1,2-benzisoxazol-5-yl)-6-(4-{2-[(dimethylamino)methyl]-1H-imidazol-1-yl}-2-fluorophenyl)-7-fluoro-1H-indazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RA0 _cell.length_a 48.871 _cell.length_b 74.984 _cell.length_c 75.089 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RA0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 45 L CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? disulf ? disulf6 B SG CYS 2 L CYS 89 1_555 B SG CYS 13 L CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? disulf ? disulf7 B SG CYS 9 L CYS 96 1_555 B SG CYS 22 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? disulf ? disulf8 B SG CYS 24 L CYS 111 1_555 B SG CYS 37 L CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? # _chem_comp.formula 'C27 H22 F2 N8 O2' _chem_comp.formula_weight 528.513 _chem_comp.id JNJ _chem_comp.mon_nstd_flag . _chem_comp.name 1-(3-amino-1,2-benzisoxazol-5-yl)-6-(4-{2-[(dimethylamino)methyl]-1H-imidazol-1-yl}-2-fluorophenyl)-7-fluoro-1H-indazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '1-(3-Aminobenzo[d]isoxazol-5-yl)-6-[4-(2-dimethylaminomethylimidazol-1-yl)-2-fluorophenyl]-7-fluoro-1H-indazole-3-carboxylic Acid Amide' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 N5 JNJ sing 173 n n N5 C18 JNJ sing 174 n n N5 C17 JNJ sing 175 n n C17 C14 JNJ sing 176 n n N4 C14 JNJ doub 177 n y N4 C15 JNJ sing 178 n y C14 N3 JNJ sing 179 n y C15 C16 JNJ doub 180 n y N3 C16 JNJ sing 181 n y N3 C8 JNJ sing 182 n y C9 C8 JNJ doub 183 n y C9 C10 JNJ sing 184 n y C8 C13 JNJ sing 185 n y F2 C10 JNJ sing 186 n n C10 C11 JNJ doub 187 n y C13 C12 JNJ doub 188 n y C11 C12 JNJ sing 189 n y C11 C5 JNJ sing 190 n y C4 C5 JNJ doub 191 n y C4 C3 JNJ sing 192 n y C5 C6 JNJ sing 193 n y C3 C2 JNJ doub 194 n y C6 F1 JNJ sing 195 n n C6 C7 JNJ doub 196 n y C2 C7 JNJ sing 197 n y C2 C1 JNJ sing 198 n y C7 N2 JNJ sing 199 n y O1 C20 JNJ doub 200 n n C1 C20 JNJ sing 201 n n C1 N1 JNJ doub 202 n y N2 C23 JNJ sing 203 n y N2 N1 JNJ sing 204 n y C24 C23 JNJ doub 205 n y C24 C25 JNJ sing 206 n y C20 N6 JNJ sing 207 n n C23 C22 JNJ sing 208 n y C25 C26 JNJ doub 209 n y C22 C21 JNJ doub 210 n y C26 C21 JNJ sing 211 n y C26 O2 JNJ sing 212 n y C21 C27 JNJ sing 213 n y O2 N7 JNJ sing 214 n y C27 N7 JNJ doub 215 n y C27 N8 JNJ sing 216 n n C3 H3 JNJ sing 217 n n N6 HN61 JNJ sing 218 n n N6 HN62 JNJ sing 219 n n C9 H9 JNJ sing 220 n n C12 H12 JNJ sing 221 n n C13 H13 JNJ sing 222 n n C15 H15 JNJ sing 223 n n C16 H16 JNJ sing 224 n n C19 H191 JNJ sing 225 n n C19 H192 JNJ sing 226 n n C19 H193 JNJ sing 227 n n C22 H22 JNJ sing 228 n n C24 H24 JNJ sing 229 n n C4 H4 JNJ sing 230 n n C17 H171 JNJ sing 231 n n C17 H172 JNJ sing 232 n n C18 H181 JNJ sing 233 n n C18 H182 JNJ sing 234 n n C18 H183 JNJ sing 235 n n C25 H25 JNJ sing 236 n n N8 HN81 JNJ sing 237 n n N8 HN82 JNJ sing 238 n n # _atom_sites.entry_id 2RA0 _atom_sites.fract_transf_matrix[1][1] 0.020462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013336 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013318 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 JNJ A 1 1 1 JNJ JNJ . D 4 HOH A 1 245 1 HOH HOH . D 4 HOH A 2 246 2 HOH HOH . D 4 HOH A 3 247 3 HOH HOH . D 4 HOH A 4 248 4 HOH HOH . D 4 HOH A 5 249 5 HOH HOH . D 4 HOH A 6 250 7 HOH HOH . D 4 HOH A 7 251 8 HOH HOH . D 4 HOH A 8 252 10 HOH HOH . D 4 HOH A 9 253 11 HOH HOH . D 4 HOH A 10 254 13 HOH HOH . D 4 HOH A 11 255 14 HOH HOH . D 4 HOH A 12 256 15 HOH HOH . D 4 HOH A 13 257 16 HOH HOH . D 4 HOH A 14 258 17 HOH HOH . D 4 HOH A 15 259 20 HOH HOH . D 4 HOH A 16 260 21 HOH HOH . D 4 HOH A 17 261 22 HOH HOH . D 4 HOH A 18 262 24 HOH HOH . D 4 HOH A 19 263 25 HOH HOH . D 4 HOH A 20 264 26 HOH HOH . D 4 HOH A 21 265 27 HOH HOH . D 4 HOH A 22 266 28 HOH HOH . D 4 HOH A 23 267 33 HOH HOH . D 4 HOH A 24 268 36 HOH HOH . D 4 HOH A 25 269 37 HOH HOH . D 4 HOH A 26 270 38 HOH HOH . D 4 HOH A 27 271 41 HOH HOH . D 4 HOH A 28 272 42 HOH HOH . D 4 HOH A 29 273 43 HOH HOH . D 4 HOH A 30 274 44 HOH HOH . D 4 HOH A 31 275 45 HOH HOH . D 4 HOH A 32 276 47 HOH HOH . D 4 HOH A 33 277 50 HOH HOH . D 4 HOH A 34 278 52 HOH HOH . D 4 HOH A 35 279 53 HOH HOH . D 4 HOH A 36 280 54 HOH HOH . D 4 HOH A 37 281 55 HOH HOH . D 4 HOH A 38 282 56 HOH HOH . D 4 HOH A 39 283 57 HOH HOH . D 4 HOH A 40 284 58 HOH HOH . D 4 HOH A 41 285 61 HOH HOH . D 4 HOH A 42 286 62 HOH HOH . D 4 HOH A 43 287 63 HOH HOH . D 4 HOH A 44 288 64 HOH HOH . D 4 HOH A 45 289 65 HOH HOH . D 4 HOH A 46 290 66 HOH HOH . D 4 HOH A 47 291 68 HOH HOH . D 4 HOH A 48 292 69 HOH HOH . D 4 HOH A 49 293 70 HOH HOH . D 4 HOH A 50 294 71 HOH HOH . D 4 HOH A 51 295 72 HOH HOH . D 4 HOH A 52 296 75 HOH HOH . D 4 HOH A 53 297 76 HOH HOH . D 4 HOH A 54 298 77 HOH HOH . D 4 HOH A 55 299 79 HOH HOH . D 4 HOH A 56 300 81 HOH HOH . D 4 HOH A 57 301 84 HOH HOH . D 4 HOH A 58 302 86 HOH HOH . E 4 HOH L 1 139 6 HOH HOH . E 4 HOH L 2 140 9 HOH HOH . E 4 HOH L 3 141 12 HOH HOH . E 4 HOH L 4 142 18 HOH HOH . E 4 HOH L 5 143 19 HOH HOH . E 4 HOH L 6 144 23 HOH HOH . E 4 HOH L 7 145 29 HOH HOH . E 4 HOH L 8 146 31 HOH HOH . E 4 HOH L 9 147 32 HOH HOH . E 4 HOH L 10 148 34 HOH HOH . E 4 HOH L 11 149 35 HOH HOH . E 4 HOH L 12 150 40 HOH HOH . E 4 HOH L 13 151 46 HOH HOH . E 4 HOH L 14 152 48 HOH HOH . E 4 HOH L 15 153 51 HOH HOH . E 4 HOH L 16 154 59 HOH HOH . E 4 HOH L 17 155 60 HOH HOH . E 4 HOH L 18 156 67 HOH HOH . E 4 HOH L 19 157 73 HOH HOH . E 4 HOH L 20 158 74 HOH HOH . E 4 HOH L 21 159 78 HOH HOH . E 4 HOH L 22 160 83 HOH HOH . E 4 HOH L 23 161 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JNJ . . . C 3 43.907 51.284 24.433 1 63.88 ? C1 JNJ 1 A 1 HETATM 2 C C2 JNJ . . . C 3 43.357 50.529 23.349 1 63.68 ? C2 JNJ 1 A 1 HETATM 3 C C3 JNJ . . . C 3 42.353 50.749 22.334 1 63.27 ? C3 JNJ 1 A 1 HETATM 4 N N6 JNJ . . . C 3 44.249 53.118 25.943 1 63.05 ? N6 JNJ 1 A 1 HETATM 5 C C7 JNJ . . . C 3 44.037 49.288 23.387 1 63.59 ? C7 JNJ 1 A 1 HETATM 6 C C8 JNJ . . . C 3 41.755 45.173 18.726 1 60.81 ? C8 JNJ 1 A 1 HETATM 7 C C9 JNJ . . . C 3 42.975 45.885 18.539 1 61.26 ? C9 JNJ 1 A 1 HETATM 8 C C10 JNJ . . . C 3 43.308 46.963 19.414 1 61.77 ? C10 JNJ 1 A 1 HETATM 9 C C11 JNJ . . . C 3 42.438 47.358 20.488 1 62.39 ? C11 JNJ 1 A 1 HETATM 10 C C12 JNJ . . . C 3 41.219 46.627 20.65 1 61.62 ? C12 JNJ 1 A 1 HETATM 11 C C13 JNJ . . . C 3 40.884 45.559 19.789 1 60.95 ? C13 JNJ 1 A 1 HETATM 12 C C14 JNJ . . . C 3 40.451 44.018 16.82 1 62.89 ? C14 JNJ 1 A 1 HETATM 13 C C15 JNJ . . . C 3 41.278 42.046 17.063 1 62.94 ? C15 JNJ 1 A 1 HETATM 14 C C16 JNJ . . . C 3 41.879 42.811 18.018 1 61.59 ? C16 JNJ 1 A 1 HETATM 15 C C19 JNJ . . . C 3 40.87 46.396 14.59 1 65.38 ? C19 JNJ 1 A 1 HETATM 16 C C20 JNJ . . . C 3 43.549 52.661 24.859 1 63.69 ? C20 JNJ 1 A 1 HETATM 17 C C21 JNJ . . . C 3 46.041 46.377 26.515 1 61.16 ? C21 JNJ 1 A 1 HETATM 18 C C22 JNJ . . . C 3 45.226 47.427 25.996 1 61.13 ? C22 JNJ 1 A 1 HETATM 19 C C24 JNJ . . . C 3 47.1 48.123 24.526 1 61.06 ? C24 JNJ 1 A 1 HETATM 20 C C27 JNJ . . . C 3 45.917 45.332 27.468 1 60.61 ? C27 JNJ 1 A 1 HETATM 21 N N1 JNJ . . . C 3 44.86 50.569 25.091 1 63.09 ? N1 JNJ 1 A 1 HETATM 22 N N2 JNJ . . . C 3 44.926 49.358 24.454 1 63.17 ? N2 JNJ 1 A 1 HETATM 23 C C4 JNJ . . . C 3 42.054 49.714 21.39 1 62.83 ? C4 JNJ 1 A 1 HETATM 24 C C5 JNJ . . . C 3 42.741 48.458 21.435 1 63.34 ? C5 JNJ 1 A 1 HETATM 25 C C6 JNJ . . . C 3 43.735 48.262 22.442 1 63.34 ? C6 JNJ 1 A 1 HETATM 26 F F1 JNJ . . . C 3 44.379 47.083 22.489 1 63.94 ? F1 JNJ 1 A 1 HETATM 27 F F2 JNJ . . . C 3 44.474 47.602 19.205 1 62.2 ? F2 JNJ 1 A 1 HETATM 28 N N3 JNJ . . . C 3 41.37 44.085 17.891 1 61.42 ? N3 JNJ 1 A 1 HETATM 29 N N4 JNJ . . . C 3 40.406 42.785 16.331 1 62.77 ? N4 JNJ 1 A 1 HETATM 30 C C17 JNJ . . . C 3 39.625 45.19 16.298 1 63.34 ? C17 JNJ 1 A 1 HETATM 31 N N5 JNJ . . . C 3 40.415 46.421 15.992 1 64.82 ? N5 JNJ 1 A 1 HETATM 32 C C18 JNJ . . . C 3 39.607 47.63 16.205 1 64.93 ? C18 JNJ 1 A 1 HETATM 33 O O1 JNJ . . . C 3 42.696 53.365 24.313 1 63.37 ? O1 JNJ 1 A 1 HETATM 34 C C23 JNJ . . . C 3 45.753 48.308 24.997 1 61.88 ? C23 JNJ 1 A 1 HETATM 35 C C25 JNJ . . . C 3 47.931 47.074 25.038 1 60.97 ? C25 JNJ 1 A 1 HETATM 36 C C26 JNJ . . . C 3 47.348 46.234 26.027 1 61.63 ? C26 JNJ 1 A 1 HETATM 37 O O2 JNJ . . . C 3 47.937 45.179 26.653 1 63.02 ? O2 JNJ 1 A 1 HETATM 38 N N7 JNJ . . . C 3 47.043 44.611 27.558 1 61.32 ? N7 JNJ 1 A 1 HETATM 39 N N8 JNJ . . . C 3 44.812 45.106 28.182 1 58.14 ? N8 JNJ 1 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #