data_2RA5 # _model_server_result.job_id tzYLGaarKMFpJFn1rYwHyw _model_server_result.datetime_utc '2025-03-13 19:32:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ra5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":247}' # _entry.id 2RA5 # _exptl.entry_id 2RA5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S,R MESO-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RA5 _cell.length_a 43.768 _cell.length_b 43.768 _cell.length_c 170.735 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RA5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 43.768 43.768 85.3675 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 146 A PRO 144 1_555 A N MSE 147 A MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 147 A MSE 145 1_555 A N ALA 148 A ALA 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C LEU 174 A LEU 172 1_555 A N MSE 175 A MSE 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 175 A MSE 173 1_555 A N ARG 176 A ARG 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C THR 212 A THR 210 1_555 A N MSE 213 A MSE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale6 A C MSE 213 A MSE 211 1_555 A N GLU 214 A GLU 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id SRT _chem_comp.mon_nstd_flag . _chem_comp.name 'S,R MESO-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 SRT sing 301 n n O1 H1 SRT sing 302 n n O11 C1 SRT doub 303 n n C1 C2 SRT sing 304 n n C2 O2 SRT sing 305 n n C2 C3 SRT sing 306 n n C2 H2 SRT sing 307 n n O2 HA SRT sing 308 n n C3 O3 SRT sing 309 n n C3 C4 SRT sing 310 n n C3 H3 SRT sing 311 n n O3 HB SRT sing 312 n n C4 O4 SRT doub 313 n n C4 O41 SRT sing 314 n n O41 H41 SRT sing 315 n n # _atom_sites.entry_id 2RA5 _atom_sites.fract_transf_matrix[1][1] 0.022848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005857 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SRT A 1 247 2 SRT SRT . C 3 IPA A 1 246 1 IPA IPA . D 4 HOH A 1 248 1 HOH HOH . D 4 HOH A 2 249 2 HOH HOH . D 4 HOH A 3 250 3 HOH HOH . D 4 HOH A 4 251 4 HOH HOH . D 4 HOH A 5 252 5 HOH HOH . D 4 HOH A 6 253 6 HOH HOH . D 4 HOH A 7 254 7 HOH HOH . D 4 HOH A 8 255 8 HOH HOH . D 4 HOH A 9 256 9 HOH HOH . D 4 HOH A 10 257 10 HOH HOH . D 4 HOH A 11 258 11 HOH HOH . D 4 HOH A 12 259 12 HOH HOH . D 4 HOH A 13 260 13 HOH HOH . D 4 HOH A 14 261 14 HOH HOH . D 4 HOH A 15 262 15 HOH HOH . D 4 HOH A 16 263 16 HOH HOH . D 4 HOH A 17 264 17 HOH HOH . D 4 HOH A 18 265 18 HOH HOH . D 4 HOH A 19 266 19 HOH HOH . D 4 HOH A 20 267 20 HOH HOH . D 4 HOH A 21 268 21 HOH HOH . D 4 HOH A 22 269 22 HOH HOH . D 4 HOH A 23 270 23 HOH HOH . D 4 HOH A 24 271 24 HOH HOH . D 4 HOH A 25 272 25 HOH HOH . D 4 HOH A 26 273 26 HOH HOH . D 4 HOH A 27 274 27 HOH HOH . D 4 HOH A 28 275 28 HOH HOH . D 4 HOH A 29 276 29 HOH HOH . D 4 HOH A 30 277 30 HOH HOH . D 4 HOH A 31 278 31 HOH HOH . D 4 HOH A 32 279 32 HOH HOH . D 4 HOH A 33 280 33 HOH HOH . D 4 HOH A 34 281 34 HOH HOH . D 4 HOH A 35 282 35 HOH HOH . D 4 HOH A 36 283 36 HOH HOH . D 4 HOH A 37 284 37 HOH HOH . D 4 HOH A 38 285 38 HOH HOH . D 4 HOH A 39 286 39 HOH HOH . D 4 HOH A 40 287 40 HOH HOH . D 4 HOH A 41 288 41 HOH HOH . D 4 HOH A 42 289 42 HOH HOH . D 4 HOH A 43 290 43 HOH HOH . D 4 HOH A 44 291 44 HOH HOH . D 4 HOH A 45 292 45 HOH HOH . D 4 HOH A 46 293 46 HOH HOH . D 4 HOH A 47 294 47 HOH HOH . D 4 HOH A 48 295 48 HOH HOH . D 4 HOH A 49 296 49 HOH HOH . D 4 HOH A 50 297 50 HOH HOH . D 4 HOH A 51 298 51 HOH HOH . D 4 HOH A 52 299 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SRT . . . B 2 36.894 25.645 50.096 1 78.97 ? O1 SRT 247 A 1 HETATM 2 O O11 SRT . . . B 2 35.901 25.186 48.16 1 80.36 ? O11 SRT 247 A 1 HETATM 3 C C1 SRT . . . B 2 36.892 25.609 48.832 1 78.79 ? C1 SRT 247 A 1 HETATM 4 C C2 SRT . . . B 2 38.107 26.131 48.087 1 75.69 ? C2 SRT 247 A 1 HETATM 5 O O2 SRT . . . B 2 39.134 26.496 49.016 1 70.63 ? O2 SRT 247 A 1 HETATM 6 C C3 SRT . . . B 2 38.609 25.136 47.02 1 75.43 ? C3 SRT 247 A 1 HETATM 7 O O3 SRT . . . B 2 39.383 25.776 45.996 1 75.31 ? O3 SRT 247 A 1 HETATM 8 C C4 SRT . . . B 2 39.465 24.07 47.629 1 76.16 ? C4 SRT 247 A 1 HETATM 9 O O4 SRT . . . B 2 40.724 24.217 47.68 1 74.42 ? O4 SRT 247 A 1 HETATM 10 O O41 SRT . . . B 2 38.838 23.077 48.053 1 76.86 ? O41 SRT 247 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 10 #