data_2RAZ # _model_server_result.job_id QtBhxcw1yC-ADG4QPDxihA _model_server_result.datetime_utc '2024-11-27 18:23:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2raz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 2RAZ # _exptl.entry_id 2RAZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 169.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(methylsulfanyl)-4-nitrobenzene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2RAZ _cell.length_a 60.322 _cell.length_b 60.322 _cell.length_c 96.83 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RAZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H7 N O2 S' _chem_comp.formula_weight 169.201 _chem_comp.id 259 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(methylsulfanyl)-4-nitrobenzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA SAH 259 sing 1 n n SAH CAI 259 sing 2 n n CAI CAD 259 doub 3 n y CAI CAE 259 sing 4 n y CAD CAF 259 sing 5 n y CAF CAJ 259 doub 6 n y CAJ NAK 259 sing 7 n n CAJ CAG 259 sing 8 n y NAK OAC 259 sing 9 n n NAK OAB 259 doub 10 n n CAG CAE 259 doub 11 n y CAA HAA1 259 sing 12 n n CAA HAA2 259 sing 13 n n CAA HAA3 259 sing 14 n n CAD HAD 259 sing 15 n n CAF HAF 259 sing 16 n n CAG HAG 259 sing 17 n n CAE HAE 259 sing 18 n n # _atom_sites.entry_id 2RAZ _atom_sites.fract_transf_matrix[1][1] 0.016578 _atom_sites.fract_transf_matrix[1][2] 0.009571 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019142 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 X 1 2001 2001 PO4 PO4 . C 2 PO4 X 1 2002 2002 PO4 PO4 . D 2 PO4 X 1 2003 2003 PO4 PO4 . E 3 259 X 1 1001 1001 259 259 . F 4 HOH X 1 2004 1 HOH HOH . F 4 HOH X 2 2005 2 HOH HOH . F 4 HOH X 3 2006 3 HOH HOH . F 4 HOH X 4 2007 4 HOH HOH . F 4 HOH X 5 2008 5 HOH HOH . F 4 HOH X 6 2009 6 HOH HOH . F 4 HOH X 7 2010 7 HOH HOH . F 4 HOH X 8 2011 8 HOH HOH . F 4 HOH X 9 2012 9 HOH HOH . F 4 HOH X 10 2013 10 HOH HOH . F 4 HOH X 11 2014 11 HOH HOH . F 4 HOH X 12 2015 12 HOH HOH . F 4 HOH X 13 2016 13 HOH HOH . F 4 HOH X 14 2017 14 HOH HOH . F 4 HOH X 15 2018 15 HOH HOH . F 4 HOH X 16 2019 16 HOH HOH . F 4 HOH X 17 2020 17 HOH HOH . F 4 HOH X 18 2021 18 HOH HOH . F 4 HOH X 19 2022 19 HOH HOH . F 4 HOH X 20 2023 20 HOH HOH . F 4 HOH X 21 2024 21 HOH HOH . F 4 HOH X 22 2025 22 HOH HOH . F 4 HOH X 23 2026 23 HOH HOH . F 4 HOH X 24 2027 24 HOH HOH . F 4 HOH X 25 2028 25 HOH HOH . F 4 HOH X 26 2029 26 HOH HOH . F 4 HOH X 27 2030 27 HOH HOH . F 4 HOH X 28 2031 28 HOH HOH . F 4 HOH X 29 2032 29 HOH HOH . F 4 HOH X 30 2033 30 HOH HOH . F 4 HOH X 31 2034 31 HOH HOH . F 4 HOH X 32 2035 32 HOH HOH . F 4 HOH X 33 2036 33 HOH HOH . F 4 HOH X 34 2037 34 HOH HOH . F 4 HOH X 35 2038 35 HOH HOH . F 4 HOH X 36 2039 36 HOH HOH . F 4 HOH X 37 2040 37 HOH HOH . F 4 HOH X 38 2041 38 HOH HOH . F 4 HOH X 39 2042 39 HOH HOH . F 4 HOH X 40 2043 40 HOH HOH . F 4 HOH X 41 2044 41 HOH HOH . F 4 HOH X 42 2045 42 HOH HOH . F 4 HOH X 43 2046 43 HOH HOH . F 4 HOH X 44 2047 44 HOH HOH . F 4 HOH X 45 2048 45 HOH HOH . F 4 HOH X 46 2049 46 HOH HOH . F 4 HOH X 47 2050 47 HOH HOH . F 4 HOH X 48 2051 48 HOH HOH . F 4 HOH X 49 2052 49 HOH HOH . F 4 HOH X 50 2053 50 HOH HOH . F 4 HOH X 51 2054 51 HOH HOH . F 4 HOH X 52 2055 52 HOH HOH . F 4 HOH X 53 2056 53 HOH HOH . F 4 HOH X 54 2057 54 HOH HOH . F 4 HOH X 55 2058 55 HOH HOH . F 4 HOH X 56 2059 56 HOH HOH . F 4 HOH X 57 2060 57 HOH HOH . F 4 HOH X 58 2061 58 HOH HOH . F 4 HOH X 59 2062 59 HOH HOH . F 4 HOH X 60 2063 60 HOH HOH . F 4 HOH X 61 2064 61 HOH HOH . F 4 HOH X 62 2065 62 HOH HOH . F 4 HOH X 63 2066 63 HOH HOH . F 4 HOH X 64 2067 64 HOH HOH . F 4 HOH X 65 2068 65 HOH HOH . F 4 HOH X 66 2069 66 HOH HOH . F 4 HOH X 67 2070 67 HOH HOH . F 4 HOH X 68 2071 68 HOH HOH . F 4 HOH X 69 2072 69 HOH HOH . F 4 HOH X 70 2073 70 HOH HOH . F 4 HOH X 71 2074 71 HOH HOH . F 4 HOH X 72 2075 72 HOH HOH . F 4 HOH X 73 2076 73 HOH HOH . F 4 HOH X 74 2077 74 HOH HOH . F 4 HOH X 75 2078 75 HOH HOH . F 4 HOH X 76 2079 76 HOH HOH . F 4 HOH X 77 2080 77 HOH HOH . F 4 HOH X 78 2081 78 HOH HOH . F 4 HOH X 79 2082 79 HOH HOH . F 4 HOH X 80 2083 80 HOH HOH . F 4 HOH X 81 2084 81 HOH HOH . F 4 HOH X 82 2085 82 HOH HOH . F 4 HOH X 83 2086 83 HOH HOH . F 4 HOH X 84 2087 84 HOH HOH . F 4 HOH X 85 2088 85 HOH HOH . F 4 HOH X 86 2089 86 HOH HOH . F 4 HOH X 87 2090 87 HOH HOH . F 4 HOH X 88 2091 88 HOH HOH . F 4 HOH X 89 2092 89 HOH HOH . F 4 HOH X 90 2093 90 HOH HOH . F 4 HOH X 91 2094 91 HOH HOH . F 4 HOH X 92 2095 92 HOH HOH . F 4 HOH X 93 2096 93 HOH HOH . F 4 HOH X 94 2097 94 HOH HOH . F 4 HOH X 95 2098 95 HOH HOH . F 4 HOH X 96 2099 96 HOH HOH . F 4 HOH X 97 2100 97 HOH HOH . F 4 HOH X 98 2101 98 HOH HOH . F 4 HOH X 99 2102 99 HOH HOH . F 4 HOH X 100 2103 100 HOH HOH . F 4 HOH X 101 2104 101 HOH HOH . F 4 HOH X 102 2105 102 HOH HOH . F 4 HOH X 103 2106 103 HOH HOH . F 4 HOH X 104 2107 104 HOH HOH . F 4 HOH X 105 2108 105 HOH HOH . F 4 HOH X 106 2109 106 HOH HOH . F 4 HOH X 107 2110 107 HOH HOH . F 4 HOH X 108 2111 108 HOH HOH . F 4 HOH X 109 2112 109 HOH HOH . F 4 HOH X 110 2113 110 HOH HOH . F 4 HOH X 111 2114 111 HOH HOH . F 4 HOH X 112 2115 112 HOH HOH . F 4 HOH X 113 2116 113 HOH HOH . F 4 HOH X 114 2117 114 HOH HOH . F 4 HOH X 115 2118 115 HOH HOH . F 4 HOH X 116 2119 116 HOH HOH . F 4 HOH X 117 2120 117 HOH HOH . F 4 HOH X 118 2121 118 HOH HOH . F 4 HOH X 119 2122 119 HOH HOH . F 4 HOH X 120 2123 120 HOH HOH . F 4 HOH X 121 2124 121 HOH HOH . F 4 HOH X 122 2125 122 HOH HOH . F 4 HOH X 123 2126 123 HOH HOH . F 4 HOH X 124 2127 124 HOH HOH . F 4 HOH X 125 2128 125 HOH HOH . F 4 HOH X 126 2129 126 HOH HOH . F 4 HOH X 127 2130 127 HOH HOH . F 4 HOH X 128 2131 128 HOH HOH . F 4 HOH X 129 2132 129 HOH HOH . F 4 HOH X 130 2133 130 HOH HOH . F 4 HOH X 131 2134 131 HOH HOH . F 4 HOH X 132 2135 132 HOH HOH . F 4 HOH X 133 2136 133 HOH HOH . F 4 HOH X 134 2137 134 HOH HOH . F 4 HOH X 135 2138 135 HOH HOH . F 4 HOH X 136 2139 136 HOH HOH . F 4 HOH X 137 2140 137 HOH HOH . F 4 HOH X 138 2141 138 HOH HOH . F 4 HOH X 139 2142 139 HOH HOH . F 4 HOH X 140 2143 140 HOH HOH . F 4 HOH X 141 2144 141 HOH HOH . F 4 HOH X 142 2145 142 HOH HOH . F 4 HOH X 143 2146 143 HOH HOH . F 4 HOH X 144 2147 144 HOH HOH . F 4 HOH X 145 2148 145 HOH HOH . F 4 HOH X 146 2149 146 HOH HOH . F 4 HOH X 147 2150 147 HOH HOH . F 4 HOH X 148 2151 148 HOH HOH . F 4 HOH X 149 2152 149 HOH HOH . F 4 HOH X 150 2153 150 HOH HOH . F 4 HOH X 151 2154 151 HOH HOH . F 4 HOH X 152 2155 152 HOH HOH . F 4 HOH X 153 2156 153 HOH HOH . F 4 HOH X 154 2157 154 HOH HOH . F 4 HOH X 155 2158 155 HOH HOH . F 4 HOH X 156 2159 156 HOH HOH . F 4 HOH X 157 2160 157 HOH HOH . F 4 HOH X 158 2161 158 HOH HOH . F 4 HOH X 159 2162 159 HOH HOH . F 4 HOH X 160 2163 160 HOH HOH . F 4 HOH X 161 2164 161 HOH HOH . F 4 HOH X 162 2165 162 HOH HOH . F 4 HOH X 163 2166 163 HOH HOH . F 4 HOH X 164 2167 164 HOH HOH . F 4 HOH X 165 2168 165 HOH HOH . F 4 HOH X 166 2169 166 HOH HOH . F 4 HOH X 167 2170 167 HOH HOH . F 4 HOH X 168 2171 168 HOH HOH . F 4 HOH X 169 2172 169 HOH HOH . F 4 HOH X 170 2173 170 HOH HOH . F 4 HOH X 171 2174 171 HOH HOH . F 4 HOH X 172 2175 172 HOH HOH . F 4 HOH X 173 2176 173 HOH HOH . F 4 HOH X 174 2177 174 HOH HOH . F 4 HOH X 175 2178 175 HOH HOH . F 4 HOH X 176 2179 176 HOH HOH . F 4 HOH X 177 2180 177 HOH HOH . F 4 HOH X 178 2181 178 HOH HOH . F 4 HOH X 179 2182 179 HOH HOH . F 4 HOH X 180 2183 180 HOH HOH . F 4 HOH X 181 2184 181 HOH HOH . F 4 HOH X 182 2185 182 HOH HOH . F 4 HOH X 183 2186 183 HOH HOH . F 4 HOH X 184 2187 184 HOH HOH . F 4 HOH X 185 2188 185 HOH HOH . F 4 HOH X 186 2189 186 HOH HOH . F 4 HOH X 187 2190 187 HOH HOH . F 4 HOH X 188 2191 188 HOH HOH . F 4 HOH X 189 2192 189 HOH HOH . F 4 HOH X 190 2193 190 HOH HOH . F 4 HOH X 191 2194 191 HOH HOH . F 4 HOH X 192 2195 192 HOH HOH . F 4 HOH X 193 2196 193 HOH HOH . F 4 HOH X 194 2197 194 HOH HOH . F 4 HOH X 195 2198 195 HOH HOH . F 4 HOH X 196 2199 196 HOH HOH . F 4 HOH X 197 2200 197 HOH HOH . F 4 HOH X 198 2201 198 HOH HOH . F 4 HOH X 199 2202 199 HOH HOH . F 4 HOH X 200 2203 200 HOH HOH . F 4 HOH X 201 2204 201 HOH HOH . F 4 HOH X 202 2205 202 HOH HOH . F 4 HOH X 203 2206 203 HOH HOH . F 4 HOH X 204 2207 204 HOH HOH . F 4 HOH X 205 2208 205 HOH HOH . F 4 HOH X 206 2209 206 HOH HOH . F 4 HOH X 207 2210 207 HOH HOH . F 4 HOH X 208 2211 208 HOH HOH . F 4 HOH X 209 2212 209 HOH HOH . F 4 HOH X 210 2213 210 HOH HOH . F 4 HOH X 211 2214 211 HOH HOH . F 4 HOH X 212 2215 212 HOH HOH . F 4 HOH X 213 2216 213 HOH HOH . F 4 HOH X 214 2217 214 HOH HOH . F 4 HOH X 215 2218 215 HOH HOH . F 4 HOH X 216 2219 216 HOH HOH . F 4 HOH X 217 2220 217 HOH HOH . F 4 HOH X 218 2221 218 HOH HOH . F 4 HOH X 219 2222 219 HOH HOH . F 4 HOH X 220 2223 220 HOH HOH . F 4 HOH X 221 2224 221 HOH HOH . F 4 HOH X 222 2225 222 HOH HOH . F 4 HOH X 223 2226 223 HOH HOH . F 4 HOH X 224 2227 224 HOH HOH . F 4 HOH X 225 2228 225 HOH HOH . F 4 HOH X 226 2229 226 HOH HOH . F 4 HOH X 227 2230 227 HOH HOH . F 4 HOH X 228 2231 228 HOH HOH . F 4 HOH X 229 2232 229 HOH HOH . F 4 HOH X 230 2233 230 HOH HOH . F 4 HOH X 231 2234 231 HOH HOH . F 4 HOH X 232 2235 232 HOH HOH . F 4 HOH X 233 2236 233 HOH HOH . F 4 HOH X 234 2237 234 HOH HOH . F 4 HOH X 235 2238 235 HOH HOH . F 4 HOH X 236 2239 236 HOH HOH . F 4 HOH X 237 2240 237 HOH HOH . F 4 HOH X 238 2241 238 HOH HOH . F 4 HOH X 239 2242 239 HOH HOH . F 4 HOH X 240 2243 240 HOH HOH . F 4 HOH X 241 2244 241 HOH HOH . F 4 HOH X 242 2245 242 HOH HOH . F 4 HOH X 243 2246 243 HOH HOH . F 4 HOH X 244 2247 244 HOH HOH . F 4 HOH X 245 2248 245 HOH HOH . F 4 HOH X 246 2249 246 HOH HOH . F 4 HOH X 247 2250 247 HOH HOH . F 4 HOH X 248 2251 248 HOH HOH . F 4 HOH X 249 2252 249 HOH HOH . F 4 HOH X 250 2253 250 HOH HOH . F 4 HOH X 251 2254 251 HOH HOH . F 4 HOH X 252 2255 252 HOH HOH . F 4 HOH X 253 2256 253 HOH HOH . F 4 HOH X 254 2257 254 HOH HOH . F 4 HOH X 255 2258 255 HOH HOH . F 4 HOH X 256 2259 256 HOH HOH . F 4 HOH X 257 2260 257 HOH HOH . F 4 HOH X 258 2261 258 HOH HOH . F 4 HOH X 259 2262 259 HOH HOH . F 4 HOH X 260 2263 260 HOH HOH . F 4 HOH X 261 2264 261 HOH HOH . F 4 HOH X 262 2265 262 HOH HOH . F 4 HOH X 263 2266 263 HOH HOH . F 4 HOH X 264 2267 264 HOH HOH . F 4 HOH X 265 2268 265 HOH HOH . F 4 HOH X 266 2269 266 HOH HOH . F 4 HOH X 267 2270 267 HOH HOH . F 4 HOH X 268 2271 268 HOH HOH . F 4 HOH X 269 2272 269 HOH HOH . F 4 HOH X 270 2273 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 259 . . . E 3 -24.559 23.335 -0.357 0.5 17.95 ? CAA 259 1001 X 1 HETATM 2 S SAH 259 . . . E 3 -25.007 23.193 -2.075 0.5 15.29 ? SAH 259 1001 X 1 HETATM 3 C CAI 259 . . . E 3 -23.982 24.327 -2.91 0.5 14.76 ? CAI 259 1001 X 1 HETATM 4 C CAD 259 . . . E 3 -24.362 24.775 -4.166 0.5 14.09 ? CAD 259 1001 X 1 HETATM 5 C CAF 259 . . . E 3 -23.571 25.7 -4.83 0.5 14.9 ? CAF 259 1001 X 1 HETATM 6 C CAJ 259 . . . E 3 -22.405 26.173 -4.244 0.5 15.52 ? CAJ 259 1001 X 1 HETATM 7 N NAK 259 . . . E 3 -21.686 27.074 -4.905 0.5 16.64 ? NAK 259 1001 X 1 HETATM 8 O OAC 259 . . . E 3 -20.62 27.723 -4.275 0.5 16.85 ? OAC 259 1001 X 1 HETATM 9 O OAB 259 . . . E 3 -22.03 27.414 -6.219 0.5 16.91 ? OAB 259 1001 X 1 HETATM 10 C CAG 259 . . . E 3 -22.019 25.732 -2.979 0.5 14.99 ? CAG 259 1001 X 1 HETATM 11 C CAE 259 . . . E 3 -22.807 24.799 -2.311 0.5 14.6 ? CAE 259 1001 X 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #