data_2RCR # _model_server_result.job_id LVU9AGIOwIHISZ6kIlyOnw _model_server_result.datetime_utc '2025-01-07 07:01:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":450}' # _entry.id 2RCR # _exptl.entry_id 2RCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 911.504 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BACTERIOCHLOROPHYLL A' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RCR _cell.length_a 142.2 _cell.length_b 139.6 _cell.length_c 78.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 190 L HIS 190 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc2 A NE2 HIS 230 L HIS 230 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc3 B NE2 HIS 182 M HIS 180 1_555 I MG BCL . M BCL 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc4 B NE2 HIS 202 M HIS 200 1_555 J MG BCL . M BCL 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 B NE2 HIS 219 M HIS 217 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc6 B OE1 GLU 234 M GLU 232 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc7 B NE2 HIS 266 M HIS 264 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C55 H74 Mg N4 O6' _chem_comp.formula_weight 911.504 _chem_comp.id BCL _chem_comp.mon_nstd_flag . _chem_comp.name 'BACTERIOCHLOROPHYLL A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag MG NA BCL sing 70 n n MG NB BCL sing 71 n n MG NC BCL sing 72 n n MG ND BCL sing 73 n n CHA C1A BCL sing 74 n n CHA C4D BCL doub 75 n n CHA CBD BCL sing 76 n n CHB C4A BCL doub 77 n n CHB C1B BCL sing 78 n n CHB HHB BCL sing 79 n n CHC C4B BCL sing 80 n n CHC C1C BCL doub 81 n n CHC HHC BCL sing 82 n n CHD C4C BCL sing 83 n n CHD C1D BCL doub 84 n n CHD HHD BCL sing 85 n n NA C1A BCL doub 86 n n NA C4A BCL sing 87 n n C1A C2A BCL sing 88 n n C2A C3A BCL sing 89 n n C2A CAA BCL sing 90 n n C2A H2A BCL sing 91 n n C3A C4A BCL sing 92 n n C3A CMA BCL sing 93 n n C3A H3A BCL sing 94 n n CMA HMA1 BCL sing 95 n n CMA HMA2 BCL sing 96 n n CMA HMA3 BCL sing 97 n n CAA CBA BCL sing 98 n n CAA HAA1 BCL sing 99 n n CAA HAA2 BCL sing 100 n n CBA CGA BCL sing 101 n n CBA HBA1 BCL sing 102 n n CBA HBA2 BCL sing 103 n n CGA O1A BCL doub 104 n n CGA O2A BCL sing 105 n n O2A C1 BCL sing 106 n n NB C1B BCL sing 107 n y NB C4B BCL sing 108 n y C1B C2B BCL doub 109 n y C2B C3B BCL sing 110 n y C2B CMB BCL sing 111 n n C3B C4B BCL doub 112 n y C3B CAB BCL sing 113 n n CMB HMB1 BCL sing 114 n n CMB HMB2 BCL sing 115 n n CMB HMB3 BCL sing 116 n n CAB OBB BCL doub 117 n n CAB CBB BCL sing 118 n n CBB HBB1 BCL sing 119 n n CBB HBB2 BCL sing 120 n n CBB HBB3 BCL sing 121 n n NC C1C BCL sing 122 n n NC C4C BCL doub 123 n n C1C C2C BCL sing 124 n n C2C C3C BCL sing 125 n n C2C CMC BCL sing 126 n n C2C H2C BCL sing 127 n n C3C C4C BCL sing 128 n n C3C CAC BCL sing 129 n n C3C H3C BCL sing 130 n n CMC HMC1 BCL sing 131 n n CMC HMC2 BCL sing 132 n n CMC HMC3 BCL sing 133 n n CAC CBC BCL sing 134 n n CAC HAC1 BCL sing 135 n n CAC HAC2 BCL sing 136 n n CBC HBC1 BCL sing 137 n n CBC HBC2 BCL sing 138 n n CBC HBC3 BCL sing 139 n n ND C1D BCL sing 140 n n ND C4D BCL sing 141 n n C1D C2D BCL sing 142 n n C2D C3D BCL doub 143 n n C2D CMD BCL sing 144 n n C3D C4D BCL sing 145 n n C3D CAD BCL sing 146 n n CMD HMD1 BCL sing 147 n n CMD HMD2 BCL sing 148 n n CMD HMD3 BCL sing 149 n n CAD OBD BCL doub 150 n n CAD CBD BCL sing 151 n n CBD CGD BCL sing 152 n n CBD HBD BCL sing 153 n n CGD O1D BCL doub 154 n n CGD O2D BCL sing 155 n n O2D CED BCL sing 156 n n CED HED1 BCL sing 157 n n CED HED2 BCL sing 158 n n CED HED3 BCL sing 159 n n C1 C2 BCL sing 160 n n C1 H11 BCL sing 161 n n C1 H12 BCL sing 162 n n C2 C3 BCL doub 163 e n C2 H2 BCL sing 164 n n C3 C4 BCL sing 165 n n C3 C5 BCL sing 166 n n C4 H41 BCL sing 167 n n C4 H42 BCL sing 168 n n C4 H43 BCL sing 169 n n C5 C6 BCL sing 170 n n C5 H51 BCL sing 171 n n C5 H52 BCL sing 172 n n C6 C7 BCL sing 173 n n C6 H61 BCL sing 174 n n C6 H62 BCL sing 175 n n C7 C8 BCL sing 176 n n C7 H71 BCL sing 177 n n C7 H72 BCL sing 178 n n C8 C9 BCL sing 179 n n C8 C10 BCL sing 180 n n C8 H8 BCL sing 181 n n C9 H91 BCL sing 182 n n C9 H92 BCL sing 183 n n C9 H93 BCL sing 184 n n C10 C11 BCL sing 185 n n C10 H101 BCL sing 186 n n C10 H102 BCL sing 187 n n C11 C12 BCL sing 188 n n C11 H111 BCL sing 189 n n C11 H112 BCL sing 190 n n C12 C13 BCL sing 191 n n C12 H121 BCL sing 192 n n C12 H122 BCL sing 193 n n C13 C14 BCL sing 194 n n C13 C15 BCL sing 195 n n C13 H13 BCL sing 196 n n C14 H141 BCL sing 197 n n C14 H142 BCL sing 198 n n C14 H143 BCL sing 199 n n C15 C16 BCL sing 200 n n C15 H151 BCL sing 201 n n C15 H152 BCL sing 202 n n C16 C17 BCL sing 203 n n C16 H161 BCL sing 204 n n C16 H162 BCL sing 205 n n C17 C18 BCL sing 206 n n C17 H171 BCL sing 207 n n C17 H172 BCL sing 208 n n C18 C19 BCL sing 209 n n C18 C20 BCL sing 210 n n C18 H18 BCL sing 211 n n C19 H191 BCL sing 212 n n C19 H192 BCL sing 213 n n C19 H193 BCL sing 214 n n C20 H201 BCL sing 215 n n C20 H202 BCL sing 216 n n C20 H203 BCL sing 217 n n # _atom_sites.entry_id 2RCR _atom_sites.fract_transf_matrix[1][1] 0.007032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 350 350 BCL BCL . E 4 BCL L 1 450 450 BCL BCL . F 5 BPH L 1 550 550 BPH BPA . G 6 UQ L 1 800 800 UQ UQ . H 7 FE M 1 600 600 FE FE . I 4 BCL M 1 601 300 BCL BCL . J 4 BCL M 1 400 400 BCL BCL . K 5 BPH M 1 500 500 BPH BPA . L 6 UQ M 1 750 750 UQ UQ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 MG MG BCL . . . E 4 -27.667 -36.876 0.172 1 0 ? MG BCL 450 L 1 HETATM 2 C CHA BCL . . . E 4 -28.018 -33.872 -1.316 1 0 ? CHA BCL 450 L 1 HETATM 3 C CHB BCL . . . E 4 -27.358 -38.312 -2.875 1 0 ? CHB BCL 450 L 1 HETATM 4 C CHC BCL . . . E 4 -26.591 -39.801 1.573 1 0 ? CHC BCL 450 L 1 HETATM 5 C CHD BCL . . . E 4 -27.418 -35.326 3.332 1 0 ? CHD BCL 450 L 1 HETATM 6 N NA BCL . . . E 4 -27.812 -36.196 -1.783 1 0 ? NA BCL 450 L 1 HETATM 7 C C1A BCL . . . E 4 -27.894 -34.895 -2.203 1 0 ? C1A BCL 450 L 1 HETATM 8 C C2A BCL . . . E 4 -27.819 -34.797 -3.661 1 0 ? C2A BCL 450 L 1 HETATM 9 C C3A BCL . . . E 4 -27.652 -36.259 -4.124 1 0 ? C3A BCL 450 L 1 HETATM 10 C C4A BCL . . . E 4 -27.605 -36.991 -2.873 1 0 ? C4A BCL 450 L 1 HETATM 11 C CMA BCL . . . E 4 -28.786 -36.744 -4.993 1 0 ? CMA BCL 450 L 1 HETATM 12 C CAA BCL . . . E 4 -26.616 -33.964 -4.144 1 0 ? CAA BCL 450 L 1 HETATM 13 C CBA BCL . . . E 4 -25.342 -34.808 -4.329 1 0 ? CBA BCL 450 L 1 HETATM 14 C CGA BCL . . . E 4 -24.153 -33.943 -4.607 1 0 ? CGA BCL 450 L 1 HETATM 15 O O1A BCL . . . E 4 -24.222 -32.738 -4.714 1 0 ? O1A BCL 450 L 1 HETATM 16 O O2A BCL . . . E 4 -23.022 -34.635 -4.723 1 0 ? O2A BCL 450 L 1 HETATM 17 N NB BCL . . . E 4 -27.113 -38.716 -0.525 1 0 ? NB BCL 450 L 1 HETATM 18 C C1B BCL . . . E 4 -27.108 -39.108 -1.823 1 0 ? C1B BCL 450 L 1 HETATM 19 C C2B BCL . . . E 4 -26.779 -40.503 -1.9 1 0 ? C2B BCL 450 L 1 HETATM 20 C C3B BCL . . . E 4 -26.534 -40.934 -0.666 1 0 ? C3B BCL 450 L 1 HETATM 21 C C4B BCL . . . E 4 -26.724 -39.795 0.215 1 0 ? C4B BCL 450 L 1 HETATM 22 C CMB BCL . . . E 4 -26.714 -41.295 -3.166 1 0 ? CMB BCL 450 L 1 HETATM 23 C CAB BCL . . . E 4 -26.119 -42.293 -0.281 1 0 ? CAB BCL 450 L 1 HETATM 24 O OBB BCL . . . E 4 -25.61 -42.534 0.82 1 0 ? OBB BCL 450 L 1 HETATM 25 C CBB BCL . . . E 4 -26.26 -43.545 -1.181 1 0 ? CBB BCL 450 L 1 HETATM 26 N NC BCL . . . E 4 -27.062 -37.451 2.113 1 0 ? NC BCL 450 L 1 HETATM 27 C C1C BCL . . . E 4 -26.761 -38.735 2.479 1 0 ? C1C BCL 450 L 1 HETATM 28 C C2C BCL . . . E 4 -26.624 -38.872 3.912 1 0 ? C2C BCL 450 L 1 HETATM 29 C C3C BCL . . . E 4 -26.906 -37.553 4.444 1 0 ? C3C BCL 450 L 1 HETATM 30 C C4C BCL . . . E 4 -27.152 -36.686 3.285 1 0 ? C4C BCL 450 L 1 HETATM 31 C CMC BCL . . . E 4 -27.561 -39.922 4.42 1 0 ? CMC BCL 450 L 1 HETATM 32 C CAC BCL . . . E 4 -25.752 -37.015 5.309 1 0 ? CAC BCL 450 L 1 HETATM 33 C CBC BCL . . . E 4 -24.68 -38.105 5.567 1 0 ? CBC BCL 450 L 1 HETATM 34 N ND BCL . . . E 4 -27.731 -35.008 0.904 1 0 ? ND BCL 450 L 1 HETATM 35 C C1D BCL . . . E 4 -27.656 -34.482 2.214 1 0 ? C1D BCL 450 L 1 HETATM 36 C C2D BCL . . . E 4 -27.891 -33.078 2.207 1 0 ? C2D BCL 450 L 1 HETATM 37 C C3D BCL . . . E 4 -28.052 -32.783 0.846 1 0 ? C3D BCL 450 L 1 HETATM 38 C C4D BCL . . . E 4 -27.931 -33.987 0.066 1 0 ? C4D BCL 450 L 1 HETATM 39 C CMD BCL . . . E 4 -27.915 -32.183 3.406 1 0 ? CMD BCL 450 L 1 HETATM 40 C CAD BCL . . . E 4 -28.332 -31.739 -0.089 1 0 ? CAD BCL 450 L 1 HETATM 41 O OBD BCL . . . E 4 -28.649 -30.558 0.072 1 0 ? OBD BCL 450 L 1 HETATM 42 C CBD BCL . . . E 4 -28.239 -32.352 -1.54 1 0 ? CBD BCL 450 L 1 HETATM 43 C CGD BCL . . . E 4 -29.475 -31.895 -2.245 1 0 ? CGD BCL 450 L 1 HETATM 44 O O1D BCL . . . E 4 -30.255 -32.582 -2.798 1 0 ? O1D BCL 450 L 1 HETATM 45 O O2D BCL . . . E 4 -29.55 -30.555 -2.146 1 0 ? O2D BCL 450 L 1 HETATM 46 C CED BCL . . . E 4 -30.807 -29.935 -2.454 1 0 ? CED BCL 450 L 1 HETATM 47 C C1 BCL . . . E 4 -22.685 -35.063 -6.044 1 0 ? C1 BCL 450 L 1 HETATM 48 C C2 BCL . . . E 4 -22.05 -33.911 -6.842 1 0 ? C2 BCL 450 L 1 HETATM 49 C C3 BCL . . . E 4 -21.395 -34.157 -7.984 1 0 ? C3 BCL 450 L 1 HETATM 50 C C4 BCL . . . E 4 -21.283 -35.574 -8.501 1 0 ? C4 BCL 450 L 1 HETATM 51 C C5 BCL . . . E 4 -20.756 -33.013 -8.756 1 0 ? C5 BCL 450 L 1 HETATM 52 C C6 BCL . . . E 4 -21.731 -31.822 -8.979 1 0 ? C6 BCL 450 L 1 HETATM 53 C C7 BCL . . . E 4 -21.328 -31.024 -10.249 1 0 ? C7 BCL 450 L 1 HETATM 54 C C8 BCL . . . E 4 -21.89 -29.574 -10.261 1 0 ? C8 BCL 450 L 1 HETATM 55 C C9 BCL . . . E 4 -21.743 -28.899 -8.884 1 0 ? C9 BCL 450 L 1 HETATM 56 C C10 BCL . . . E 4 -23.39 -29.556 -10.649 1 0 ? C10 BCL 450 L 1 HETATM 57 C C11 BCL . . . E 4 -23.647 -28.667 -11.891 1 0 ? C11 BCL 450 L 1 HETATM 58 C C12 BCL . . . E 4 -25.161 -28.528 -12.202 1 0 ? C12 BCL 450 L 1 HETATM 59 C C13 BCL . . . E 4 -25.987 -29.665 -11.562 1 0 ? C13 BCL 450 L 1 HETATM 60 C C14 BCL . . . E 4 -26.728 -30.489 -12.637 1 0 ? C14 BCL 450 L 1 HETATM 61 C C15 BCL . . . E 4 -27.05 -29.096 -10.601 0 0 ? C15 BCL 450 L 1 HETATM 62 C C16 BCL . . . E 4 -27.444 -30.124 -9.523 0 0 ? C16 BCL 450 L 1 HETATM 63 C C17 BCL . . . E 4 -28.325 -29.464 -8.447 0 0 ? C17 BCL 450 L 1 HETATM 64 C C18 BCL . . . E 4 -28.84 -30.497 -7.429 0 0 ? C18 BCL 450 L 1 HETATM 65 C C19 BCL . . . E 4 -29.588 -29.801 -6.276 0 0 ? C19 BCL 450 L 1 HETATM 66 C C20 BCL . . . E 4 -27.675 -31.301 -6.823 0 0 ? C20 BCL 450 L 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 66 #