data_2RCR # _model_server_result.job_id T24hDoCvHyKPIZ3vSBvuig _model_server_result.datetime_utc '2025-01-07 06:46:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":601}' # _entry.id 2RCR # _exptl.entry_id 2RCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 911.504 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BACTERIOCHLOROPHYLL A' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RCR _cell.length_a 142.2 _cell.length_b 139.6 _cell.length_c 78.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 190 L HIS 190 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc2 A NE2 HIS 230 L HIS 230 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc3 B NE2 HIS 182 M HIS 180 1_555 I MG BCL . M BCL 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc4 B NE2 HIS 202 M HIS 200 1_555 J MG BCL . M BCL 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 B NE2 HIS 219 M HIS 217 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc6 B OE1 GLU 234 M GLU 232 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc7 B NE2 HIS 266 M HIS 264 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C55 H74 Mg N4 O6' _chem_comp.formula_weight 911.504 _chem_comp.id BCL _chem_comp.mon_nstd_flag . _chem_comp.name 'BACTERIOCHLOROPHYLL A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag MG NA BCL sing 70 n n MG NB BCL sing 71 n n MG NC BCL sing 72 n n MG ND BCL sing 73 n n CHA C1A BCL sing 74 n n CHA C4D BCL doub 75 n n CHA CBD BCL sing 76 n n CHB C4A BCL doub 77 n n CHB C1B BCL sing 78 n n CHB HHB BCL sing 79 n n CHC C4B BCL sing 80 n n CHC C1C BCL doub 81 n n CHC HHC BCL sing 82 n n CHD C4C BCL sing 83 n n CHD C1D BCL doub 84 n n CHD HHD BCL sing 85 n n NA C1A BCL doub 86 n n NA C4A BCL sing 87 n n C1A C2A BCL sing 88 n n C2A C3A BCL sing 89 n n C2A CAA BCL sing 90 n n C2A H2A BCL sing 91 n n C3A C4A BCL sing 92 n n C3A CMA BCL sing 93 n n C3A H3A BCL sing 94 n n CMA HMA1 BCL sing 95 n n CMA HMA2 BCL sing 96 n n CMA HMA3 BCL sing 97 n n CAA CBA BCL sing 98 n n CAA HAA1 BCL sing 99 n n CAA HAA2 BCL sing 100 n n CBA CGA BCL sing 101 n n CBA HBA1 BCL sing 102 n n CBA HBA2 BCL sing 103 n n CGA O1A BCL doub 104 n n CGA O2A BCL sing 105 n n O2A C1 BCL sing 106 n n NB C1B BCL sing 107 n y NB C4B BCL sing 108 n y C1B C2B BCL doub 109 n y C2B C3B BCL sing 110 n y C2B CMB BCL sing 111 n n C3B C4B BCL doub 112 n y C3B CAB BCL sing 113 n n CMB HMB1 BCL sing 114 n n CMB HMB2 BCL sing 115 n n CMB HMB3 BCL sing 116 n n CAB OBB BCL doub 117 n n CAB CBB BCL sing 118 n n CBB HBB1 BCL sing 119 n n CBB HBB2 BCL sing 120 n n CBB HBB3 BCL sing 121 n n NC C1C BCL sing 122 n n NC C4C BCL doub 123 n n C1C C2C BCL sing 124 n n C2C C3C BCL sing 125 n n C2C CMC BCL sing 126 n n C2C H2C BCL sing 127 n n C3C C4C BCL sing 128 n n C3C CAC BCL sing 129 n n C3C H3C BCL sing 130 n n CMC HMC1 BCL sing 131 n n CMC HMC2 BCL sing 132 n n CMC HMC3 BCL sing 133 n n CAC CBC BCL sing 134 n n CAC HAC1 BCL sing 135 n n CAC HAC2 BCL sing 136 n n CBC HBC1 BCL sing 137 n n CBC HBC2 BCL sing 138 n n CBC HBC3 BCL sing 139 n n ND C1D BCL sing 140 n n ND C4D BCL sing 141 n n C1D C2D BCL sing 142 n n C2D C3D BCL doub 143 n n C2D CMD BCL sing 144 n n C3D C4D BCL sing 145 n n C3D CAD BCL sing 146 n n CMD HMD1 BCL sing 147 n n CMD HMD2 BCL sing 148 n n CMD HMD3 BCL sing 149 n n CAD OBD BCL doub 150 n n CAD CBD BCL sing 151 n n CBD CGD BCL sing 152 n n CBD HBD BCL sing 153 n n CGD O1D BCL doub 154 n n CGD O2D BCL sing 155 n n O2D CED BCL sing 156 n n CED HED1 BCL sing 157 n n CED HED2 BCL sing 158 n n CED HED3 BCL sing 159 n n C1 C2 BCL sing 160 n n C1 H11 BCL sing 161 n n C1 H12 BCL sing 162 n n C2 C3 BCL doub 163 e n C2 H2 BCL sing 164 n n C3 C4 BCL sing 165 n n C3 C5 BCL sing 166 n n C4 H41 BCL sing 167 n n C4 H42 BCL sing 168 n n C4 H43 BCL sing 169 n n C5 C6 BCL sing 170 n n C5 H51 BCL sing 171 n n C5 H52 BCL sing 172 n n C6 C7 BCL sing 173 n n C6 H61 BCL sing 174 n n C6 H62 BCL sing 175 n n C7 C8 BCL sing 176 n n C7 H71 BCL sing 177 n n C7 H72 BCL sing 178 n n C8 C9 BCL sing 179 n n C8 C10 BCL sing 180 n n C8 H8 BCL sing 181 n n C9 H91 BCL sing 182 n n C9 H92 BCL sing 183 n n C9 H93 BCL sing 184 n n C10 C11 BCL sing 185 n n C10 H101 BCL sing 186 n n C10 H102 BCL sing 187 n n C11 C12 BCL sing 188 n n C11 H111 BCL sing 189 n n C11 H112 BCL sing 190 n n C12 C13 BCL sing 191 n n C12 H121 BCL sing 192 n n C12 H122 BCL sing 193 n n C13 C14 BCL sing 194 n n C13 C15 BCL sing 195 n n C13 H13 BCL sing 196 n n C14 H141 BCL sing 197 n n C14 H142 BCL sing 198 n n C14 H143 BCL sing 199 n n C15 C16 BCL sing 200 n n C15 H151 BCL sing 201 n n C15 H152 BCL sing 202 n n C16 C17 BCL sing 203 n n C16 H161 BCL sing 204 n n C16 H162 BCL sing 205 n n C17 C18 BCL sing 206 n n C17 H171 BCL sing 207 n n C17 H172 BCL sing 208 n n C18 C19 BCL sing 209 n n C18 C20 BCL sing 210 n n C18 H18 BCL sing 211 n n C19 H191 BCL sing 212 n n C19 H192 BCL sing 213 n n C19 H193 BCL sing 214 n n C20 H201 BCL sing 215 n n C20 H202 BCL sing 216 n n C20 H203 BCL sing 217 n n # _atom_sites.entry_id 2RCR _atom_sites.fract_transf_matrix[1][1] 0.007032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 350 350 BCL BCL . E 4 BCL L 1 450 450 BCL BCL . F 5 BPH L 1 550 550 BPH BPA . G 6 UQ L 1 800 800 UQ UQ . H 7 FE M 1 600 600 FE FE . I 4 BCL M 1 601 300 BCL BCL . J 4 BCL M 1 400 400 BCL BCL . K 5 BPH M 1 500 500 BPH BPA . L 6 UQ M 1 750 750 UQ UQ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 MG MG BCL . . . I 4 -17.075 -22.153 12.173 1 0 ? MG BCL 601 M 1 HETATM 2 C CHA BCL . . . I 4 -16.12 -24.96 13.62 1 0 ? CHA BCL 601 M 1 HETATM 3 C CHB BCL . . . I 4 -13.913 -20.903 12.575 1 0 ? CHB BCL 601 M 1 HETATM 4 C CHC BCL . . . I 4 -18.019 -19.231 10.665 1 0 ? CHC BCL 601 M 1 HETATM 5 C CHD BCL . . . I 4 -20.176 -23.561 11.246 1 0 ? CHD BCL 601 M 1 HETATM 6 N NA BCL . . . I 4 -15.247 -22.833 13.003 1 0 ? NA BCL 601 M 1 HETATM 7 C C1A BCL . . . I 4 -15.08 -24.088 13.525 1 0 ? C1A BCL 601 M 1 HETATM 8 C C2A BCL . . . I 4 -13.695 -24.318 13.936 1 0 ? C2A BCL 601 M 1 HETATM 9 C C3A BCL . . . I 4 -12.993 -22.971 13.583 1 0 ? C3A BCL 601 M 1 HETATM 10 C C4A BCL . . . I 4 -14.079 -22.18 13.02 1 0 ? C4A BCL 601 M 1 HETATM 11 C CMA BCL . . . I 4 -12.402 -22.271 14.781 1 0 ? CMA BCL 601 M 1 HETATM 12 C CAA BCL . . . I 4 -13.086 -25.533 13.218 1 0 ? CAA BCL 601 M 1 HETATM 13 C CBA BCL . . . I 4 -11.597 -25.371 12.908 1 0 ? CBA BCL 601 M 1 HETATM 14 C CGA BCL . . . I 4 -11.321 -25.662 11.47 1 0 ? CGA BCL 601 M 1 HETATM 15 O O1A BCL . . . I 4 -11.304 -26.785 11.011 1 0 ? O1A BCL 601 M 1 HETATM 16 O O2A BCL . . . I 4 -11.106 -24.556 10.765 1 0 ? O2A BCL 601 M 1 HETATM 17 N NB BCL . . . I 4 -16.145 -20.392 11.725 1 0 ? NB BCL 601 M 1 HETATM 18 C C1B BCL . . . I 4 -14.836 -20.075 11.991 1 0 ? C1B BCL 601 M 1 HETATM 19 C C2B BCL . . . I 4 -14.594 -18.72 11.547 1 0 ? C2B BCL 601 M 1 HETATM 20 C C3B BCL . . . I 4 -15.727 -18.254 11.003 1 0 ? C3B BCL 601 M 1 HETATM 21 C C4B BCL . . . I 4 -16.724 -19.307 11.108 1 0 ? C4B BCL 601 M 1 HETATM 22 C CMB BCL . . . I 4 -13.284 -18.003 11.677 1 0 ? CMB BCL 601 M 1 HETATM 23 C CAB BCL . . . I 4 -15.943 -16.951 10.339 1 0 ? CAB BCL 601 M 1 HETATM 24 O OBB BCL . . . I 4 -16.238 -15.927 10.965 1 0 ? OBB BCL 601 M 1 HETATM 25 C CBB BCL . . . I 4 -15.832 -16.717 8.807 1 0 ? CBB BCL 601 M 1 HETATM 26 N NC BCL . . . I 4 -18.818 -21.503 11.129 1 0 ? NC BCL 601 M 1 HETATM 27 C C1C BCL . . . I 4 -19.012 -20.235 10.66 1 0 ? C1C BCL 601 M 1 HETATM 28 C C2C BCL . . . I 4 -20.356 -20.047 10.144 1 0 ? C2C BCL 601 M 1 HETATM 29 C C3C BCL . . . I 4 -20.998 -21.343 10.291 1 0 ? C3C BCL 601 M 1 HETATM 30 C C4C BCL . . . I 4 -20.003 -22.218 10.929 1 0 ? C4C BCL 601 M 1 HETATM 31 C CMC BCL . . . I 4 -21.054 -18.975 10.937 1 0 ? CMC BCL 601 M 1 HETATM 32 C CAC BCL . . . I 4 -21.454 -21.944 8.933 1 0 ? CAC BCL 601 M 1 HETATM 33 C CBC BCL . . . I 4 -20.402 -21.733 7.814 1 0 ? CBC BCL 601 M 1 HETATM 34 N ND BCL . . . I 4 -18.008 -23.892 12.388 1 0 ? ND BCL 601 M 1 HETATM 35 C C1D BCL . . . I 4 -19.24 -24.388 11.937 1 0 ? C1D BCL 601 M 1 HETATM 36 C C2D BCL . . . I 4 -19.354 -25.757 12.292 1 0 ? C2D BCL 601 M 1 HETATM 37 C C3D BCL . . . I 4 -18.151 -26.034 12.966 1 0 ? C3D BCL 601 M 1 HETATM 38 C C4D BCL . . . I 4 -17.375 -24.864 13.046 1 0 ? C4D BCL 601 M 1 HETATM 39 C CMD BCL . . . I 4 -20.501 -26.651 11.975 1 0 ? CMD BCL 601 M 1 HETATM 40 C CAD BCL . . . I 4 -17.421 -27.057 13.66 1 0 ? CAD BCL 601 M 1 HETATM 41 O OBD BCL . . . I 4 -17.708 -28.223 13.94 1 0 ? OBD BCL 601 M 1 HETATM 42 C CBD BCL . . . I 4 -16.026 -26.451 14.033 1 0 ? CBD BCL 601 M 1 HETATM 43 C CGD BCL . . . I 4 -15.678 -26.903 15.385 1 0 ? CGD BCL 601 M 1 HETATM 44 O O1D BCL . . . I 4 -16.196 -27.79 15.958 1 0 ? O1D BCL 601 M 1 HETATM 45 O O2D BCL . . . I 4 -14.643 -26.193 15.816 1 0 ? O2D BCL 601 M 1 HETATM 46 C CED BCL . . . I 4 -14.269 -26.375 17.183 1 0 ? CED BCL 601 M 1 HETATM 47 C C1 BCL . . . I 4 -10.19 -24.662 9.674 1 0 ? C1 BCL 601 M 1 HETATM 48 C C2 BCL . . . I 4 -8.969 -25.521 10.046 1 0 ? C2 BCL 601 M 1 HETATM 49 C C3 BCL . . . I 4 -8.086 -25.851 9.097 1 0 ? C3 BCL 601 M 1 HETATM 50 C C4 BCL . . . I 4 -8.3 -25.371 7.679 1 0 ? C4 BCL 601 M 1 HETATM 51 C C5 BCL . . . I 4 -6.888 -26.703 9.446 1 0 ? C5 BCL 601 M 1 HETATM 52 C C6 BCL . . . I 4 -5.567 -25.933 9.244 0 0 ? C6 BCL 601 M 1 HETATM 53 C C7 BCL . . . I 4 -5.684 -24.486 9.758 1 0 ? C7 BCL 601 M 1 HETATM 54 C C8 BCL . . . I 4 -4.773 -24.25 10.98 1 0 ? C8 BCL 601 M 1 HETATM 55 C C9 BCL . . . I 4 -4.832 -22.775 11.426 1 0 ? C9 BCL 601 M 1 HETATM 56 C C10 BCL . . . I 4 -3.306 -24.59 10.647 0 0 ? C10 BCL 601 M 1 HETATM 57 C C11 BCL . . . I 4 -2.589 -25.272 11.834 0 0 ? C11 BCL 601 M 1 HETATM 58 C C12 BCL . . . I 4 -1.086 -25.454 11.525 0 0 ? C12 BCL 601 M 1 HETATM 59 C C13 BCL . . . I 4 -0.229 -25.342 12.804 1 0 ? C13 BCL 601 M 1 HETATM 60 C C14 BCL . . . I 4 -0.828 -24.318 13.784 1 0 ? C14 BCL 601 M 1 HETATM 61 C C15 BCL . . . I 4 1.217 -24.904 12.469 1 0 ? C15 BCL 601 M 1 HETATM 62 C C16 BCL . . . I 4 1.313 -23.379 12.229 0 0 ? C16 BCL 601 M 1 HETATM 63 C C17 BCL . . . I 4 2.764 -22.959 11.893 1 0 ? C17 BCL 601 M 1 HETATM 64 C C18 BCL . . . I 4 2.83 -21.492 11.413 1 0 ? C18 BCL 601 M 1 HETATM 65 C C19 BCL . . . I 4 2.032 -20.565 12.349 0 0 ? C19 BCL 601 M 1 HETATM 66 C C20 BCL . . . I 4 2.248 -21.345 9.995 0 0 ? C20 BCL 601 M 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 66 #