data_2RCR # _model_server_result.job_id aGdkF24cfadU9eQtqFEXHw _model_server_result.datetime_utc '2025-01-07 07:08:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":800}' # _entry.id 2RCR # _exptl.entry_id 2RCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 863.343 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Coenzyme Q10,(2Z,6E,10Z,14E,18E,22E,26Z)-isomer' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RCR _cell.length_a 142.2 _cell.length_b 139.6 _cell.length_c 78.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 190 L HIS 190 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc2 A NE2 HIS 230 L HIS 230 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc3 B NE2 HIS 182 M HIS 180 1_555 I MG BCL . M BCL 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc4 B NE2 HIS 202 M HIS 200 1_555 J MG BCL . M BCL 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 B NE2 HIS 219 M HIS 217 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc6 B OE1 GLU 234 M GLU 232 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc7 B NE2 HIS 266 M HIS 264 1_555 H FE FE . M FE 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C59 H90 O4' _chem_comp.formula_weight 863.343 _chem_comp.id UQ _chem_comp.mon_nstd_flag . _chem_comp.name 'Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 UQ sing 650 n n C1 C6 UQ sing 651 n n C1 O1 UQ doub 652 n n C2 C3 UQ doub 653 n n C2 O2 UQ sing 654 n n C3 C4 UQ sing 655 n n C3 O3 UQ sing 656 n n C4 C5 UQ sing 657 n n C4 O4 UQ doub 658 n n C5 C6 UQ doub 659 n n C5 CM5 UQ sing 660 n n C6 C7 UQ sing 661 n n CM5 HM51 UQ sing 662 n n CM5 HM52 UQ sing 663 n n CM5 HM53 UQ sing 664 n n CM3 O3 UQ sing 665 n n CM3 HM31 UQ sing 666 n n CM3 HM32 UQ sing 667 n n CM3 HM33 UQ sing 668 n n CM2 O2 UQ sing 669 n n CM2 HM21 UQ sing 670 n n CM2 HM22 UQ sing 671 n n CM2 HM23 UQ sing 672 n n C7 C8 UQ sing 673 n n C7 H71 UQ sing 674 n n C7 H72 UQ sing 675 n n C8 C9 UQ doub 676 z n C8 H8 UQ sing 677 n n C9 C10 UQ sing 678 n n C9 C11 UQ sing 679 n n C10 H101 UQ sing 680 n n C10 H102 UQ sing 681 n n C10 H103 UQ sing 682 n n C11 C12 UQ sing 683 n n C11 H111 UQ sing 684 n n C11 H112 UQ sing 685 n n C12 C13 UQ sing 686 n n C12 H121 UQ sing 687 n n C12 H122 UQ sing 688 n n C13 C14 UQ doub 689 n n C13 H13 UQ sing 690 n n C14 C15 UQ sing 691 n n C14 C16 UQ sing 692 n n C15 H151 UQ sing 693 n n C15 H152 UQ sing 694 n n C15 H153 UQ sing 695 n n C16 C17 UQ sing 696 n n C16 H161 UQ sing 697 n n C16 H162 UQ sing 698 n n C17 C18 UQ sing 699 n n C17 H171 UQ sing 700 n n C17 H172 UQ sing 701 n n C18 C19 UQ doub 702 z n C18 H18 UQ sing 703 n n C19 C20 UQ sing 704 n n C19 C21 UQ sing 705 n n C20 H201 UQ sing 706 n n C20 H202 UQ sing 707 n n C20 H203 UQ sing 708 n n C21 C22 UQ sing 709 n n C21 H211 UQ sing 710 n n C21 H212 UQ sing 711 n n C22 C23 UQ sing 712 n n C22 H221 UQ sing 713 n n C22 H222 UQ sing 714 n n C23 C24 UQ doub 715 e n C23 H23 UQ sing 716 n n C24 C25 UQ sing 717 n n C24 C26 UQ sing 718 n n C25 H251 UQ sing 719 n n C25 H252 UQ sing 720 n n C25 H253 UQ sing 721 n n C26 C27 UQ sing 722 n n C26 H261 UQ sing 723 n n C26 H262 UQ sing 724 n n C27 C28 UQ sing 725 n n C27 H271 UQ sing 726 n n C27 H272 UQ sing 727 n n C28 C29 UQ doub 728 e n C28 H28 UQ sing 729 n n C29 C30 UQ sing 730 n n C29 C31 UQ sing 731 n n C30 H301 UQ sing 732 n n C30 H302 UQ sing 733 n n C30 H303 UQ sing 734 n n C31 C32 UQ sing 735 n n C31 H311 UQ sing 736 n n C31 H312 UQ sing 737 n n C32 C33 UQ sing 738 n n C32 H321 UQ sing 739 n n C32 H322 UQ sing 740 n n C33 C34 UQ doub 741 e n C33 H33 UQ sing 742 n n C34 C35 UQ sing 743 n n C34 C36 UQ sing 744 n n C35 H351 UQ sing 745 n n C35 H352 UQ sing 746 n n C35 H353 UQ sing 747 n n C36 C37 UQ sing 748 n n C36 H361 UQ sing 749 n n C36 H362 UQ sing 750 n n C37 C38 UQ sing 751 n n C37 H371 UQ sing 752 n n C37 H372 UQ sing 753 n n C38 C39 UQ doub 754 z n C38 H38 UQ sing 755 n n C39 C40 UQ sing 756 n n C39 C41 UQ sing 757 n n C40 H401 UQ sing 758 n n C40 H402 UQ sing 759 n n C40 H403 UQ sing 760 n n C41 C42 UQ sing 761 n n C41 H411 UQ sing 762 n n C41 H412 UQ sing 763 n n C42 C43 UQ sing 764 n n C42 H421 UQ sing 765 n n C42 H422 UQ sing 766 n n C43 C44 UQ doub 767 n n C43 H43 UQ sing 768 n n C44 C45 UQ sing 769 n n C44 C46 UQ sing 770 n n C45 H451 UQ sing 771 n n C45 H452 UQ sing 772 n n C45 H453 UQ sing 773 n n C46 C47 UQ sing 774 n n C46 H461 UQ sing 775 n n C46 H462 UQ sing 776 n n C47 C48 UQ sing 777 n n C47 H471 UQ sing 778 n n C47 H472 UQ sing 779 n n C48 C49 UQ doub 780 n n C48 H48 UQ sing 781 n n C49 C50 UQ sing 782 n n C49 C51 UQ sing 783 n n C50 H501 UQ sing 784 n n C50 H502 UQ sing 785 n n C50 H503 UQ sing 786 n n C51 C52 UQ sing 787 n n C51 H511 UQ sing 788 n n C51 H512 UQ sing 789 n n C52 C53 UQ sing 790 n n C52 H521 UQ sing 791 n n C52 H522 UQ sing 792 n n C53 C54 UQ doub 793 n n C53 H53 UQ sing 794 n n C54 C55 UQ sing 795 n n C54 C56 UQ sing 796 n n C55 H551 UQ sing 797 n n C55 H552 UQ sing 798 n n C55 H553 UQ sing 799 n n C56 H561 UQ sing 800 n n C56 H562 UQ sing 801 n n C56 H563 UQ sing 802 n n # _atom_sites.entry_id 2RCR _atom_sites.fract_transf_matrix[1][1] 0.007032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 350 350 BCL BCL . E 4 BCL L 1 450 450 BCL BCL . F 5 BPH L 1 550 550 BPH BPA . G 6 UQ L 1 800 800 UQ UQ . H 7 FE M 1 600 600 FE FE . I 4 BCL M 1 601 300 BCL BCL . J 4 BCL M 1 400 400 BCL BCL . K 5 BPH M 1 500 500 BPH BPA . L 6 UQ M 1 750 750 UQ UQ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UQ . . . G 6 2.39 -26.582 -2.91 1 0 ? C1 UQ 800 L 1 HETATM 2 C C2 UQ . . . G 6 2.549 -26.792 -4.362 1 0 ? C2 UQ 800 L 1 HETATM 3 C C3 UQ . . . G 6 2.02 -27.875 -4.873 1 0 ? C3 UQ 800 L 1 HETATM 4 C C4 UQ . . . G 6 1.259 -28.809 -4.075 1 0 ? C4 UQ 800 L 1 HETATM 5 C C5 UQ . . . G 6 1.061 -28.594 -2.615 1 0 ? C5 UQ 800 L 1 HETATM 6 C C6 UQ . . . G 6 1.593 -27.492 -2.069 1 0 ? C6 UQ 800 L 1 HETATM 7 C CM5 UQ . . . G 6 0.262 -29.532 -1.748 1 0 ? CM5 UQ 800 L 1 HETATM 8 C CM3 UQ . . . G 6 1.206 -27.172 -6.819 1 0 ? CM3 UQ 800 L 1 HETATM 9 C CM2 UQ . . . G 6 3.052 -24.617 -5.39 1 0 ? CM2 UQ 800 L 1 HETATM 10 C C7 UQ . . . G 6 1.552 -27.211 -0.586 1 0 ? C7 UQ 800 L 1 HETATM 11 C C8 UQ . . . G 6 0.238 -26.982 0.299 1 0 ? C8 UQ 800 L 1 HETATM 12 C C9 UQ . . . G 6 -0.013 -27.475 1.488 1 0 ? C9 UQ 800 L 1 HETATM 13 C C10 UQ . . . G 6 1.06 -28.295 2.249 1 0 ? C10 UQ 800 L 1 HETATM 14 C C11 UQ . . . G 6 -1.457 -27.183 2.045 1 0 ? C11 UQ 800 L 1 HETATM 15 C C12 UQ . . . G 6 -1.779 -27.601 3.511 1 0 ? C12 UQ 800 L 1 HETATM 16 C C13 UQ . . . G 6 -3.256 -27.215 3.787 1 0 ? C13 UQ 800 L 1 HETATM 17 C C14 UQ . . . G 6 -3.603 -26.084 4.34 1 0 ? C14 UQ 800 L 1 HETATM 18 C C15 UQ . . . G 6 -5.117 -25.829 4.538 1 0 ? C15 UQ 800 L 1 HETATM 19 C C16 UQ . . . G 6 -2.513 -25.042 4.793 1 0 ? C16 UQ 800 L 1 HETATM 20 C C17 UQ . . . G 6 -2.697 -24.649 5.952 1 0 ? C17 UQ 800 L 1 HETATM 21 C C18 UQ . . . G 6 -1.362 -24.755 6.666 1 0 ? C18 UQ 800 L 1 HETATM 22 C C19 UQ . . . G 6 -1.118 -23.992 7.636 1 0 ? C19 UQ 800 L 1 HETATM 23 C C20 UQ . . . G 6 0.247 -24.172 8.277 1 0 ? C20 UQ 800 L 1 HETATM 24 C C21 UQ . . . G 6 -2.178 -22.958 8.105 1 0 ? C21 UQ 800 L 1 HETATM 25 C C22 UQ . . . G 6 -1.701 -21.769 9.027 1 0 ? C22 UQ 800 L 1 HETATM 26 C C23 UQ . . . G 6 -1.484 -20.403 8.281 1 0 ? C23 UQ 800 L 1 HETATM 27 C C24 UQ . . . G 6 -1.211 -19.198 8.775 1 0 ? C24 UQ 800 L 1 HETATM 28 C C25 UQ . . . G 6 -1.078 -18.105 7.687 1 0 ? C25 UQ 800 L 1 HETATM 29 C C26 UQ . . . G 6 -1.066 -18.825 10.318 0 0 ? C26 UQ 800 L 1 HETATM 30 C C27 UQ . . . G 6 0.345 -18.501 10.938 0 0 ? C27 UQ 800 L 1 HETATM 31 C C28 UQ . . . G 6 1.156 -17.52 10.089 0 0 ? C28 UQ 800 L 1 HETATM 32 C C29 UQ . . . G 6 2.157 -16.766 10.497 0 0 ? C29 UQ 800 L 1 HETATM 33 C C30 UQ . . . G 6 2.736 -15.908 9.356 0 0 ? C30 UQ 800 L 1 HETATM 34 C C31 UQ . . . G 6 2.778 -16.669 11.956 0 0 ? C31 UQ 800 L 1 HETATM 35 C C32 UQ . . . G 6 3.768 -15.468 12.201 0 0 ? C32 UQ 800 L 1 HETATM 36 C C33 UQ . . . G 6 5.225 -15.95 12.514 0 0 ? C33 UQ 800 L 1 HETATM 37 C C34 UQ . . . G 6 6.425 -15.611 11.93 0 0 ? C34 UQ 800 L 1 HETATM 38 C C35 UQ . . . G 6 6.659 -14.566 10.746 0 0 ? C35 UQ 800 L 1 HETATM 39 C C36 UQ . . . G 6 7.729 -16.286 12.495 0 0 ? C36 UQ 800 L 1 HETATM 40 C C37 UQ . . . G 6 8.741 -15.137 12.275 0 0 ? C37 UQ 800 L 1 HETATM 41 C C38 UQ . . . G 6 10.15 -15.442 12.796 0 0 ? C38 UQ 800 L 1 HETATM 42 C C39 UQ . . . G 6 10.978 -14.439 12.656 0 0 ? C39 UQ 800 L 1 HETATM 43 C C40 UQ . . . G 6 10.483 -13.101 12.001 0 0 ? C40 UQ 800 L 1 HETATM 44 C C41 UQ . . . G 6 12.429 -14.619 13.163 0 0 ? C41 UQ 800 L 1 HETATM 45 O O2 UQ . . . G 6 3.294 -26.002 -5.178 1 0 ? O2 UQ 800 L 1 HETATM 46 O O3 UQ . . . G 6 2.124 -28.063 -6.161 1 0 ? O3 UQ 800 L 1 HETATM 47 O O4 UQ . . . G 6 0.786 -29.759 -4.663 1 0 ? O4 UQ 800 L 1 HETATM 48 O O1 UQ . . . G 6 2.862 -25.617 -2.369 1 0 ? O1 UQ 800 L 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 559 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 48 #