data_2RDI
#
_model_server_result.job_id            itKURGo840V6UbJ6le9ElQ 
_model_server_result.datetime_utc      '2024-11-14 18:06:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2rdi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":353}' 
#
_entry.id    2RDI 
#
_exptl.entry_id    2RDI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.08 
_cell.angle_gamma         90 
_cell.entry_id            2RDI 
_cell.length_a            92.927 
_cell.length_b            51.069 
_cell.length_c            86.026 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2RDI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 250 n n 
C1 C2 PEG sing 251 n n 
C1 H11 PEG sing 252 n n 
C1 H12 PEG sing 253 n n 
O1 HO1 PEG sing 254 n n 
C2 O2 PEG sing 255 n n 
C2 H21 PEG sing 256 n n 
C2 H22 PEG sing 257 n n 
O2 C3 PEG sing 258 n n 
C3 C4 PEG sing 259 n n 
C3 H31 PEG sing 260 n n 
C3 H32 PEG sing 261 n n 
C4 O4 PEG sing 262 n n 
C4 H41 PEG sing 263 n n 
C4 H42 PEG sing 264 n n 
O4 HO4 PEG sing 265 n n 
#
_atom_sites.entry_id                     2RDI 
_atom_sites.fract_transf_matrix[1][1]    0.010761 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001528 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019581 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011741 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PEG A 1 353 1 PEG PEG . 
C 3 GOL A 1 354 1 GOL GOL . 
D 4 HOH A 1 355 2 HOH HOH . 
D 4 HOH A 2 356 3 HOH HOH . 
D 4 HOH A 3 357 4 HOH HOH . 
D 4 HOH A 4 358 5 HOH HOH . 
D 4 HOH A 5 359 6 HOH HOH . 
D 4 HOH A 6 360 7 HOH HOH . 
D 4 HOH A 7 361 8 HOH HOH . 
D 4 HOH A 8 362 9 HOH HOH . 
D 4 HOH A 9 363 10 HOH HOH . 
D 4 HOH A 10 364 11 HOH HOH . 
D 4 HOH A 11 365 12 HOH HOH . 
D 4 HOH A 12 366 13 HOH HOH . 
D 4 HOH A 13 367 14 HOH HOH . 
D 4 HOH A 14 368 15 HOH HOH . 
D 4 HOH A 15 369 16 HOH HOH . 
D 4 HOH A 16 370 17 HOH HOH . 
D 4 HOH A 17 371 18 HOH HOH . 
D 4 HOH A 18 372 19 HOH HOH . 
D 4 HOH A 19 373 20 HOH HOH . 
D 4 HOH A 20 374 21 HOH HOH . 
D 4 HOH A 21 375 22 HOH HOH . 
D 4 HOH A 22 376 23 HOH HOH . 
D 4 HOH A 23 377 24 HOH HOH . 
D 4 HOH A 24 378 25 HOH HOH . 
D 4 HOH A 25 379 26 HOH HOH . 
D 4 HOH A 26 380 27 HOH HOH . 
D 4 HOH A 27 381 28 HOH HOH . 
D 4 HOH A 28 382 29 HOH HOH . 
D 4 HOH A 29 383 30 HOH HOH . 
D 4 HOH A 30 384 31 HOH HOH . 
D 4 HOH A 31 385 32 HOH HOH . 
D 4 HOH A 32 386 33 HOH HOH . 
D 4 HOH A 33 387 34 HOH HOH . 
D 4 HOH A 34 388 35 HOH HOH . 
D 4 HOH A 35 389 36 HOH HOH . 
D 4 HOH A 36 390 37 HOH HOH . 
D 4 HOH A 37 391 38 HOH HOH . 
D 4 HOH A 38 392 39 HOH HOH . 
D 4 HOH A 39 393 40 HOH HOH . 
D 4 HOH A 40 394 41 HOH HOH . 
D 4 HOH A 41 395 42 HOH HOH . 
D 4 HOH A 42 396 43 HOH HOH . 
D 4 HOH A 43 397 44 HOH HOH . 
D 4 HOH A 44 398 45 HOH HOH . 
D 4 HOH A 45 399 46 HOH HOH . 
D 4 HOH A 46 400 48 HOH HOH . 
D 4 HOH A 47 401 49 HOH HOH . 
D 4 HOH A 48 402 50 HOH HOH . 
D 4 HOH A 49 403 51 HOH HOH . 
D 4 HOH A 50 404 52 HOH HOH . 
D 4 HOH A 51 405 53 HOH HOH . 
D 4 HOH A 52 406 54 HOH HOH . 
D 4 HOH A 53 407 55 HOH HOH . 
D 4 HOH A 54 408 56 HOH HOH . 
D 4 HOH A 55 409 57 HOH HOH . 
D 4 HOH A 56 410 58 HOH HOH . 
D 4 HOH A 57 411 59 HOH HOH . 
D 4 HOH A 58 412 60 HOH HOH . 
D 4 HOH A 59 413 61 HOH HOH . 
D 4 HOH A 60 414 62 HOH HOH . 
D 4 HOH A 61 415 63 HOH HOH . 
D 4 HOH A 62 416 64 HOH HOH . 
D 4 HOH A 63 417 65 HOH HOH . 
D 4 HOH A 64 418 66 HOH HOH . 
D 4 HOH A 65 419 67 HOH HOH . 
D 4 HOH A 66 420 68 HOH HOH . 
D 4 HOH A 67 421 69 HOH HOH . 
D 4 HOH A 68 422 71 HOH HOH . 
D 4 HOH A 69 423 72 HOH HOH . 
D 4 HOH A 70 424 73 HOH HOH . 
D 4 HOH A 71 425 74 HOH HOH . 
D 4 HOH A 72 426 75 HOH HOH . 
D 4 HOH A 73 427 76 HOH HOH . 
D 4 HOH A 74 428 77 HOH HOH . 
D 4 HOH A 75 429 78 HOH HOH . 
D 4 HOH A 76 430 79 HOH HOH . 
D 4 HOH A 77 431 80 HOH HOH . 
D 4 HOH A 78 432 81 HOH HOH . 
D 4 HOH A 79 433 82 HOH HOH . 
D 4 HOH A 80 434 83 HOH HOH . 
D 4 HOH A 81 435 85 HOH HOH . 
D 4 HOH A 82 436 87 HOH HOH . 
D 4 HOH A 83 437 88 HOH HOH . 
D 4 HOH A 84 438 89 HOH HOH . 
D 4 HOH A 85 439 90 HOH HOH . 
D 4 HOH A 86 440 91 HOH HOH . 
D 4 HOH A 87 441 92 HOH HOH . 
D 4 HOH A 88 442 93 HOH HOH . 
D 4 HOH A 89 443 94 HOH HOH . 
D 4 HOH A 90 444 95 HOH HOH . 
D 4 HOH A 91 445 96 HOH HOH . 
D 4 HOH A 92 446 97 HOH HOH . 
D 4 HOH A 93 447 98 HOH HOH . 
D 4 HOH A 94 448 99 HOH HOH . 
D 4 HOH A 95 449 100 HOH HOH . 
D 4 HOH A 96 450 101 HOH HOH . 
D 4 HOH A 97 451 102 HOH HOH . 
D 4 HOH A 98 452 103 HOH HOH . 
D 4 HOH A 99 453 104 HOH HOH . 
D 4 HOH A 100 454 105 HOH HOH . 
D 4 HOH A 101 455 106 HOH HOH . 
D 4 HOH A 102 456 107 HOH HOH . 
D 4 HOH A 103 457 108 HOH HOH . 
D 4 HOH A 104 458 109 HOH HOH . 
D 4 HOH A 105 459 110 HOH HOH . 
D 4 HOH A 106 460 111 HOH HOH . 
D 4 HOH A 107 461 112 HOH HOH . 
D 4 HOH A 108 462 113 HOH HOH . 
D 4 HOH A 109 463 114 HOH HOH . 
D 4 HOH A 110 464 115 HOH HOH . 
D 4 HOH A 111 465 116 HOH HOH . 
D 4 HOH A 112 466 117 HOH HOH . 
D 4 HOH A 113 467 118 HOH HOH . 
D 4 HOH A 114 468 119 HOH HOH . 
D 4 HOH A 115 469 120 HOH HOH . 
D 4 HOH A 116 470 121 HOH HOH . 
D 4 HOH A 117 471 122 HOH HOH . 
D 4 HOH A 118 472 123 HOH HOH . 
D 4 HOH A 119 473 124 HOH HOH . 
D 4 HOH A 120 474 125 HOH HOH . 
D 4 HOH A 121 475 126 HOH HOH . 
D 4 HOH A 122 476 127 HOH HOH . 
D 4 HOH A 123 477 128 HOH HOH . 
D 4 HOH A 124 478 129 HOH HOH . 
D 4 HOH A 125 479 130 HOH HOH . 
D 4 HOH A 126 480 131 HOH HOH . 
D 4 HOH A 127 481 132 HOH HOH . 
D 4 HOH A 128 482 133 HOH HOH . 
D 4 HOH A 129 483 134 HOH HOH . 
D 4 HOH A 130 484 135 HOH HOH . 
D 4 HOH A 131 485 136 HOH HOH . 
D 4 HOH A 132 486 137 HOH HOH . 
D 4 HOH A 133 487 138 HOH HOH . 
D 4 HOH A 134 488 139 HOH HOH . 
D 4 HOH A 135 489 140 HOH HOH . 
D 4 HOH A 136 490 141 HOH HOH . 
D 4 HOH A 137 491 142 HOH HOH . 
D 4 HOH A 138 492 143 HOH HOH . 
D 4 HOH A 139 493 144 HOH HOH . 
D 4 HOH A 140 494 145 HOH HOH . 
D 4 HOH A 141 495 146 HOH HOH . 
D 4 HOH A 142 496 147 HOH HOH . 
D 4 HOH A 143 497 148 HOH HOH . 
D 4 HOH A 144 498 149 HOH HOH . 
D 4 HOH A 145 499 150 HOH HOH . 
D 4 HOH A 146 500 151 HOH HOH . 
D 4 HOH A 147 501 152 HOH HOH . 
D 4 HOH A 148 502 153 HOH HOH . 
D 4 HOH A 149 503 154 HOH HOH . 
D 4 HOH A 150 504 155 HOH HOH . 
D 4 HOH A 151 505 156 HOH HOH . 
D 4 HOH A 152 506 157 HOH HOH . 
D 4 HOH A 153 507 158 HOH HOH . 
D 4 HOH A 154 508 159 HOH HOH . 
D 4 HOH A 155 509 160 HOH HOH . 
D 4 HOH A 156 510 161 HOH HOH . 
D 4 HOH A 157 511 162 HOH HOH . 
D 4 HOH A 158 512 163 HOH HOH . 
D 4 HOH A 159 513 164 HOH HOH . 
D 4 HOH A 160 514 165 HOH HOH . 
D 4 HOH A 161 515 166 HOH HOH . 
D 4 HOH A 162 516 167 HOH HOH . 
D 4 HOH A 163 517 168 HOH HOH . 
D 4 HOH A 164 518 169 HOH HOH . 
D 4 HOH A 165 519 170 HOH HOH . 
D 4 HOH A 166 520 171 HOH HOH . 
D 4 HOH A 167 521 172 HOH HOH . 
D 4 HOH A 168 522 173 HOH HOH . 
D 4 HOH A 169 523 174 HOH HOH . 
D 4 HOH A 170 524 175 HOH HOH . 
D 4 HOH A 171 525 176 HOH HOH . 
D 4 HOH A 172 526 177 HOH HOH . 
D 4 HOH A 173 527 178 HOH HOH . 
D 4 HOH A 174 528 179 HOH HOH . 
D 4 HOH A 175 529 180 HOH HOH . 
D 4 HOH A 176 530 181 HOH HOH . 
D 4 HOH A 177 531 182 HOH HOH . 
D 4 HOH A 178 532 183 HOH HOH . 
D 4 HOH A 179 533 184 HOH HOH . 
D 4 HOH A 180 534 185 HOH HOH . 
D 4 HOH A 181 535 186 HOH HOH . 
D 4 HOH A 182 536 187 HOH HOH . 
D 4 HOH A 183 537 188 HOH HOH . 
D 4 HOH A 184 538 189 HOH HOH . 
D 4 HOH A 185 539 190 HOH HOH . 
D 4 HOH A 186 540 191 HOH HOH . 
D 4 HOH A 187 541 192 HOH HOH . 
D 4 HOH A 188 542 193 HOH HOH . 
D 4 HOH A 189 543 194 HOH HOH . 
D 4 HOH A 190 544 195 HOH HOH . 
D 4 HOH A 191 545 196 HOH HOH . 
D 4 HOH A 192 546 197 HOH HOH . 
D 4 HOH A 193 547 198 HOH HOH . 
D 4 HOH A 194 548 199 HOH HOH . 
D 4 HOH A 195 549 200 HOH HOH . 
D 4 HOH A 196 550 201 HOH HOH . 
D 4 HOH A 197 551 202 HOH HOH . 
D 4 HOH A 198 552 203 HOH HOH . 
D 4 HOH A 199 553 204 HOH HOH . 
D 4 HOH A 200 554 205 HOH HOH . 
D 4 HOH A 201 555 206 HOH HOH . 
D 4 HOH A 202 556 207 HOH HOH . 
D 4 HOH A 203 557 208 HOH HOH . 
D 4 HOH A 204 558 209 HOH HOH . 
D 4 HOH A 205 559 210 HOH HOH . 
D 4 HOH A 206 560 211 HOH HOH . 
D 4 HOH A 207 561 212 HOH HOH . 
D 4 HOH A 208 562 213 HOH HOH . 
D 4 HOH A 209 563 214 HOH HOH . 
D 4 HOH A 210 564 215 HOH HOH . 
D 4 HOH A 211 565 216 HOH HOH . 
D 4 HOH A 212 566 217 HOH HOH . 
D 4 HOH A 213 567 218 HOH HOH . 
D 4 HOH A 214 568 219 HOH HOH . 
D 4 HOH A 215 569 220 HOH HOH . 
D 4 HOH A 216 570 221 HOH HOH . 
D 4 HOH A 217 571 222 HOH HOH . 
D 4 HOH A 218 572 223 HOH HOH . 
D 4 HOH A 219 573 224 HOH HOH . 
D 4 HOH A 220 574 225 HOH HOH . 
D 4 HOH A 221 575 226 HOH HOH . 
D 4 HOH A 222 576 227 HOH HOH . 
D 4 HOH A 223 577 228 HOH HOH . 
D 4 HOH A 224 578 229 HOH HOH . 
D 4 HOH A 225 579 230 HOH HOH . 
D 4 HOH A 226 580 231 HOH HOH . 
D 4 HOH A 227 581 232 HOH HOH . 
D 4 HOH A 228 582 233 HOH HOH . 
D 4 HOH A 229 583 234 HOH HOH . 
D 4 HOH A 230 584 235 HOH HOH . 
D 4 HOH A 231 585 236 HOH HOH . 
D 4 HOH A 232 586 237 HOH HOH . 
D 4 HOH A 233 587 238 HOH HOH . 
D 4 HOH A 234 588 239 HOH HOH . 
D 4 HOH A 235 589 240 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . B 2 -6.537 -0.328 44.289 1 48.52 ? C1 PEG 353 A 1 
HETATM 2 O O1 PEG . . . B 2 -6.426 -1.737 44.006 1 47.14 ? O1 PEG 353 A 1 
HETATM 3 C C2 PEG . . . B 2 -6.032 0.026 45.688 1 49.02 ? C2 PEG 353 A 1 
HETATM 4 O O2 PEG . . . B 2 -5.21 1.201 45.721 1 50.06 ? O2 PEG 353 A 1 
HETATM 5 C C3 PEG . . . B 2 -4.228 1.154 46.77 1 48.88 ? C3 PEG 353 A 1 
HETATM 6 C C4 PEG . . . B 2 -3.05 2.032 46.378 1 49.38 ? C4 PEG 353 A 1 
HETATM 7 O O4 PEG . . . B 2 -1.849 1.647 47.041 1 49.66 ? O4 PEG 353 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           7 
#